SRR3551852_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551852_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	361872
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1587	0.438552858469293	No Hit
GCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	978	0.2702613078657647	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	830	0.22936286863863464	No Hit
CCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	790	0.21830923641508598	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC	763	0.21084803466419064	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	663	0.18321395410531902	No Hit
CTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGCT	615	0.16994959543706062	No Hit
GCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAAGCTAATGGCTG	406	0.11219436706901888	No Hit
GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT	389	0.10749657337401071	No Hit
TCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	380	0.10500950612371227	No Hit
CGTGAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTC	367	0.10141707565105894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTACGA	30	2.1613632E-6	45.000004	14
GTTGTAG	55	1.8189894E-12	45.000004	1
TTCTAGG	20	7.0268736E-4	45.0	2
TTGTGCG	35	1.2088458E-7	45.0	1
CGTGCGG	25	3.88549E-5	45.0	2
ATAATCG	20	7.0268736E-4	45.0	41
GACCGTT	25	3.88549E-5	45.0	7
ATTACAC	20	7.0268736E-4	45.0	28
TAACGGA	25	3.88549E-5	45.0	35
TAACGAA	20	7.0268736E-4	45.0	35
TCGATCA	20	7.0268736E-4	45.0	17
CCGCTAC	25	3.88549E-5	45.0	20
TAGTTGG	70	0.0	45.0	2
TGTTGCG	45	3.8380676E-10	45.0	1
GCACAAT	20	7.0268736E-4	45.0	10
ACGGCTA	25	3.88549E-5	45.0	5
GTTCGCA	20	7.0268736E-4	45.0	12
ACTACGG	25	3.88549E-5	45.0	2
ACTACGA	20	7.0268736E-4	45.0	31
CTGTTAC	20	7.0268736E-4	45.0	41