##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551847_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 360653 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.265742971776195 28.0 25.0 31.0 16.0 33.0 2 27.63772379544881 31.0 25.0 33.0 16.0 34.0 3 27.565457655974026 31.0 25.0 33.0 16.0 34.0 4 31.739896798307516 35.0 28.0 37.0 19.0 37.0 5 33.183018025636834 35.0 32.0 35.0 28.0 37.0 6 32.86409928657186 35.0 32.0 35.0 28.0 37.0 7 34.09366066551505 35.0 33.0 37.0 31.0 37.0 8 34.094769764843214 35.0 35.0 37.0 31.0 37.0 9 36.50178980904082 39.0 37.0 39.0 32.0 39.0 10 35.429764898669916 37.0 34.0 39.0 31.0 39.0 11 35.93222294005595 37.0 35.0 39.0 31.0 39.0 12 35.8881806057346 37.0 35.0 39.0 31.0 39.0 13 35.87058474489329 37.0 35.0 39.0 31.0 39.0 14 36.681186625371204 39.0 35.0 40.0 31.0 41.0 15 37.013578148525035 39.0 35.0 40.0 32.0 41.0 16 36.61970370411448 38.0 35.0 40.0 31.0 41.0 17 36.78081147252345 38.0 35.0 40.0 32.0 41.0 18 36.61817037429329 38.0 35.0 40.0 31.0 41.0 19 36.26119289178241 38.0 34.0 40.0 30.0 41.0 20 36.586874364000856 38.0 35.0 40.0 31.0 41.0 21 36.73087427527291 38.0 35.0 40.0 31.0 41.0 22 37.085852606244785 39.0 35.0 40.0 32.0 41.0 23 37.41104330201052 39.0 35.0 40.0 33.0 41.0 24 37.47517697066155 39.0 35.0 41.0 33.0 41.0 25 36.45984367244969 38.0 35.0 40.0 31.0 41.0 26 36.76421657382581 38.0 35.0 40.0 31.0 41.0 27 37.01349496607543 39.0 35.0 40.0 32.0 41.0 28 37.09622823045975 39.0 35.0 40.0 32.0 41.0 29 37.26746762123149 39.0 35.0 41.0 33.0 41.0 30 36.83291418621223 39.0 35.0 40.0 31.0 41.0 31 37.02568674044026 39.0 35.0 40.0 32.0 41.0 32 36.896970217910294 39.0 35.0 40.0 32.0 41.0 33 36.93627115260375 39.0 35.0 41.0 32.0 41.0 34 36.932164712341226 39.0 35.0 41.0 32.0 41.0 35 36.884004846764064 39.0 35.0 41.0 32.0 41.0 36 36.75438718102996 39.0 35.0 41.0 31.0 41.0 37 36.7543927265266 39.0 35.0 41.0 32.0 41.0 38 36.69594041918409 39.0 35.0 41.0 31.0 41.0 39 36.58617840417243 39.0 35.0 41.0 31.0 41.0 40 36.42319903064719 39.0 35.0 41.0 31.0 41.0 41 36.30961339570169 39.0 35.0 40.0 30.0 41.0 42 36.398995710558346 39.0 35.0 40.0 31.0 41.0 43 36.38853135839713 39.0 35.0 40.0 31.0 41.0 44 36.47755321597214 39.0 35.0 40.0 31.0 41.0 45 36.51222643371884 39.0 35.0 40.0 32.0 41.0 46 36.355740836759985 39.0 35.0 40.0 31.0 41.0 47 36.283377651093986 39.0 35.0 40.0 31.0 41.0 48 36.32564542649028 38.0 35.0 40.0 31.0 41.0 49 36.30121751378749 38.0 35.0 40.0 31.0 41.0 50 36.1625385065423 38.0 35.0 40.0 31.0 41.0 51 35.25047344677571 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 13.0 10 13.0 11 16.0 12 22.0 13 25.0 14 25.0 15 41.0 16 47.0 17 97.0 18 204.0 19 427.0 20 746.0 21 926.0 22 1279.0 23 1663.0 24 2208.0 25 3007.0 26 3465.0 27 3749.0 28 4222.0 29 5071.0 30 6743.0 31 9626.0 32 14206.0 33 23414.0 34 32430.0 35 29156.0 36 42075.0 37 67424.0 38 82077.0 39 26235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.10623785189642 18.79951088719628 23.381477486670015 12.712773774237288 2 32.082084441277345 27.04538711725675 23.694243497212 17.178284944253893 3 32.34743645554037 24.940316592403224 24.690214693902448 18.02203225815396 4 28.10152695250005 23.86282659509279 28.462261508985094 19.57338494342207 5 29.17374872800171 26.7525848946217 23.77603957266403 20.29762680471256 6 25.42083387632988 36.5689457733611 23.06372052915129 14.946499821157733 7 75.92478088356398 6.306616054767325 13.17526819408129 4.593334867587403 8 76.53229004056531 9.578459072848416 8.935181462513828 4.954069424072446 9 70.96987963499541 8.178498445874565 10.243364120082184 10.608257799047838 10 45.01418260765889 22.262396264553463 18.340343765336765 14.383077362450889 11 35.56798362969392 25.503184501445986 21.906098105381073 17.02273376347902 12 31.785677645825768 22.305651138351823 26.142302989299964 19.766368226522445 13 26.095998092349156 26.685484385267834 27.69199202557583 19.52652549680718 14 20.034492989105875 31.25608271662789 26.57651537627581 22.132908917990424 15 17.912231424665816 26.53436960180561 35.94729559992569 19.60610337360288 16 21.927170992616173 23.619933842225073 31.664508544223953 22.788386620934805 17 21.97375316439902 24.991335161498725 28.41041111539347 24.624500558708785 18 22.03558545194411 26.210512597981996 29.227262770585575 22.526639179488317 19 24.829683934418956 27.74162422051113 26.073261556121814 21.355430288948103 20 28.243491666504923 25.908283031057554 28.166963812861674 17.681261489575853 21 25.228959692557666 28.10624062464474 26.518010386715208 20.146789296082385 22 22.6999359495138 23.90608146889115 28.663285762214652 24.7306968193804 23 23.077306995921287 28.148663673946977 27.375898717049353 21.39813061308238 24 23.70089809318098 26.11568460542405 28.374642662060207 21.808774639334764 25 20.8793494023341 29.40499593792371 27.832847640252538 21.882807019489647 26 20.654756788381075 27.253897790951413 29.480691967070843 22.610653453596672 27 22.839682464862346 29.837267401075273 27.105278480977564 20.21777165308482 28 19.20544124130397 30.092914796216863 30.232938586397452 20.46870537608172 29 22.40852010103895 25.873346402220417 30.353275863503143 21.364857633237488 30 20.427391426107643 31.467920688307043 27.341239363044256 20.763448522541058 31 23.443309774215106 27.788760941958056 23.710325437470367 25.057603846356468 32 27.90854366939967 28.413738413377953 24.160619764704578 19.517098152517796 33 25.342919648526426 29.61655663477082 23.416136840675108 21.62438687602765 34 22.620635347550138 28.97355629926827 26.499432972968478 21.906375380213113 35 24.363862216590462 27.313789154672218 26.14618483694853 22.176163791788785 36 23.601356428478343 28.941669693583584 25.331274105580707 22.12569977235736 37 23.911626965531966 29.691698114253867 26.95139094919493 19.445283971019233 38 22.53883927209811 28.570121418648952 24.241029465996398 24.650009843256537 39 24.466453904445547 29.038993159629893 25.66566755302188 20.82888538290268 40 23.690361649563428 27.416658117359344 27.987844271363333 20.905135961713892 41 21.827906602745575 27.6734146118291 26.80609893720557 23.692579848219758 42 24.011168630234604 25.794045800256754 27.3864351606669 22.80835040884174 43 24.71905127643469 26.89898600593923 25.59246699736312 22.789495720262966 44 22.417115620832213 28.095426906195154 26.428727890798083 23.058729582174557 45 21.121410330705693 27.54004541761749 25.57527595777659 25.763268293900232 46 24.040282487598883 28.510507329760188 25.450779558190284 21.99843062445065 47 20.65364768905291 28.959692557666234 30.05354177006707 20.333117983213782 48 23.565587975145082 25.90107388542449 27.00130041896227 23.532037720468153 49 21.86894327788761 24.631155154677764 30.331093876939885 23.16880769049474 50 21.44415823520115 26.65165685575886 28.155595544747996 23.74858936429199 51 20.327017936908884 27.982853324386596 26.49166927767134 25.198459461033178 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 104.0 1 287.5 2 471.0 3 1547.0 4 2623.0 5 1882.5 6 1142.0 7 1179.5 8 1217.0 9 1270.5 10 1324.0 11 1288.5 12 1253.0 13 1203.5 14 1154.0 15 1078.0 16 1002.0 17 958.0 18 914.0 19 957.5 20 1001.0 21 1125.0 22 1249.0 23 1149.0 24 1049.0 25 1244.5 26 2079.0 27 2718.0 28 3604.0 29 4490.0 30 5108.5 31 5727.0 32 6382.0 33 7037.0 34 7581.5 35 8126.0 36 9329.0 37 10532.0 38 11444.5 39 12357.0 40 14133.5 41 15910.0 42 18233.0 43 20556.0 44 23303.0 45 26050.0 46 33432.5 47 40815.0 48 35030.5 49 29246.0 50 28259.5 51 27273.0 52 25296.0 53 23319.0 54 22648.5 55 21978.0 56 20596.0 57 19214.0 58 18107.0 59 17000.0 60 16788.5 61 16577.0 62 14939.0 63 13301.0 64 10963.0 65 8625.0 66 6927.5 67 5230.0 68 4224.5 69 3219.0 70 2828.0 71 2437.0 72 1909.5 73 1382.0 74 1065.5 75 548.0 76 347.0 77 329.0 78 311.0 79 218.0 80 125.0 81 76.5 82 28.0 83 21.0 84 14.0 85 10.5 86 7.0 87 4.5 88 2.0 89 3.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 360653.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.135665029820906 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6760793143855 18.264925011021674 2 9.651218895756267 4.658771727949026 3 3.227029386761023 2.336595009607573 4 1.3739861682328884 1.3264827964830461 5 0.8501252211474393 1.0259168785508508 6 0.5916412012039611 0.8567792310059809 7 0.39289571031408677 0.6637959479056046 8 0.29984146313443466 0.5789498493011288 9 0.26422810927555546 0.573958902324395 >10 6.091032327734761 39.66804657108079 >50 1.5106954943363278 23.06011595633476 >100 0.05973852905360384 2.1946302956026984 >500 0.0045952714656618335 0.7608421391198742 >1k 0.00689290719849275 4.0301896837125994 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 3787 1.0500397889383977 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 3687 1.0223123057343206 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC 3398 0.9421798792745382 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1406 0.38984841384932334 No Hit GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 1248 0.3460389903868816 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGAAGGT 1009 0.2797703055291374 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCT 769 0.2132243458393525 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTA 767 0.21266979617527096 No Hit GAACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 706 0.19575603142078396 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTC 502 0.1391919656844668 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07846877746753805 0.0 2 0.0 0.0 0.0 0.6061227828411243 0.0 3 0.0 0.0 0.0 0.7444829240294688 0.0 4 0.0 0.0 0.0 1.1412632086798113 0.0 5 0.0 0.0 0.0 2.626347209090178 0.0 6 0.0 0.0 0.0 2.932181348831148 0.0 7 0.0 0.0 0.0 3.4271169240239234 0.0 8 0.0 0.0 0.0 3.9702983199917927 0.0 9 0.0 0.0 0.0 4.136663219216255 0.0 10 0.0 0.0 0.0 5.624242693114988 0.0 11 0.0 0.0 0.0 6.261974806808761 0.0 12 0.0 0.0 0.0 7.780886336728101 0.0 13 0.0 0.0 0.0 8.067033963394177 0.0 14 0.0 0.0 0.0 8.195134935797013 0.0 15 0.0 0.0 0.0 8.589419746958988 0.0 16 0.0 0.0 0.0 8.975940862823823 0.0 17 0.0 0.0 0.0 9.418471494760892 0.0 18 0.0 0.0 0.0 9.839374689798781 0.0 19 0.0 0.0 0.0 10.398915300857057 0.0 20 0.0 0.0 0.0 10.703640341269864 0.0 21 0.0 0.0 0.0 11.030824643077972 0.0 22 0.0 0.0 0.0 11.434259523697294 0.0 23 0.0 0.0 0.0 11.809966921112537 0.0 24 0.0 0.0 0.0 12.11275103770106 0.0 25 0.0 0.0 0.0 12.367843883178567 0.0 26 0.0 0.0 0.0 12.619054881007505 0.0 27 0.0 0.0 0.0 12.871097703332566 0.0 28 0.0 0.0 0.0 13.118426853512933 0.0 29 0.0 0.0 0.0 13.355496834907791 0.0 30 0.0 0.0 0.0 13.637208064261214 0.0 31 0.0 0.0 0.0 13.933337584880759 0.0 32 0.0 0.0 0.0 14.220871585707037 0.0 33 0.0 0.0 0.0 14.525319351287804 0.0 34 0.0 0.0 0.0 14.807307855473267 0.0 35 0.0 0.0 0.0 15.101219177436484 0.0 36 0.0 0.0 0.0 15.397071423223986 0.0 37 0.0 0.0 0.0 15.7045692119572 0.0 38 0.0 0.0 0.0 16.000976007408784 0.0 39 2.7727483204077047E-4 0.0 0.0 16.30570104782159 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTGAC 25 3.8854632E-5 45.000004 10 ATATGCA 25 3.8854632E-5 45.000004 28 CGTTCAT 25 3.8854632E-5 45.000004 26 GTACTAT 25 3.8854632E-5 45.000004 13 GACTCGA 25 3.8854632E-5 45.000004 9 AGTGTCG 25 3.8854632E-5 45.000004 1 TATCACG 20 7.026843E-4 45.0 1 AACGTCA 20 7.026843E-4 45.0 45 AGCCGTA 20 7.026843E-4 45.0 9 CGAACGA 20 7.026843E-4 45.0 34 GCGACGC 20 7.026843E-4 45.0 19 CGTATCG 20 7.026843E-4 45.0 2 GCGAACC 35 1.2088276E-7 45.0 33 GCGAACA 35 1.2088276E-7 45.0 33 CGGCACT 20 7.026843E-4 45.0 26 TAGCGAC 20 7.026843E-4 45.0 41 CCGGAAA 20 7.026843E-4 45.0 35 CACGCAT 20 7.026843E-4 45.0 20 ACCGAAC 20 7.026843E-4 45.0 40 CGCGCGA 20 7.026843E-4 45.0 40 >>END_MODULE