##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551817_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 687507 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.527476811145196 28.0 25.0 31.0 16.0 33.0 2 27.57419488092485 31.0 25.0 33.0 16.0 34.0 3 27.474124627094707 31.0 25.0 33.0 16.0 34.0 4 31.681867966435252 35.0 28.0 37.0 19.0 37.0 5 33.19745689862067 35.0 32.0 35.0 28.0 37.0 6 32.97486280139693 35.0 32.0 35.0 28.0 37.0 7 34.10054733988163 35.0 33.0 37.0 31.0 37.0 8 34.15512860232696 35.0 35.0 37.0 31.0 37.0 9 36.543382103745856 39.0 37.0 39.0 32.0 39.0 10 35.53738652842807 37.0 34.0 39.0 31.0 39.0 11 36.06532297125702 37.0 35.0 39.0 31.0 39.0 12 36.06809821572726 37.0 35.0 39.0 32.0 39.0 13 36.22156574405788 37.0 35.0 39.0 32.0 39.0 14 37.15774966654885 39.0 36.0 40.0 32.0 41.0 15 37.34983207443706 39.0 36.0 40.0 32.0 41.0 16 36.99770475064254 38.0 35.0 40.0 32.0 41.0 17 37.05757468651228 38.0 36.0 40.0 32.0 41.0 18 36.86934823936338 38.0 35.0 40.0 32.0 41.0 19 36.5566299688585 38.0 35.0 40.0 31.0 41.0 20 36.85725818064398 38.0 35.0 40.0 32.0 41.0 21 36.97211955660088 39.0 35.0 40.0 32.0 41.0 22 37.350569521473965 39.0 36.0 40.0 32.0 41.0 23 37.69434347577552 39.0 36.0 40.0 33.0 41.0 24 37.746900031563314 40.0 36.0 41.0 33.0 41.0 25 36.764219127950696 39.0 35.0 40.0 31.0 41.0 26 37.0952484847427 39.0 35.0 40.0 32.0 41.0 27 37.41015727839862 39.0 36.0 40.0 33.0 41.0 28 37.428138186229376 39.0 36.0 41.0 33.0 41.0 29 37.5704611007597 40.0 36.0 41.0 33.0 41.0 30 37.17208842964508 39.0 35.0 41.0 32.0 41.0 31 37.29420936805007 39.0 36.0 40.0 33.0 41.0 32 37.21528362620308 39.0 36.0 40.0 33.0 41.0 33 37.295743897880314 40.0 36.0 41.0 33.0 41.0 34 37.32464833085336 40.0 36.0 41.0 33.0 41.0 35 37.22411553627818 40.0 36.0 41.0 33.0 41.0 36 37.17505858122172 40.0 36.0 41.0 32.0 41.0 37 37.220661025996826 40.0 36.0 41.0 33.0 41.0 38 37.041000309815026 40.0 35.0 41.0 32.0 41.0 39 37.01809436122105 40.0 35.0 41.0 32.0 41.0 40 36.88510371530763 39.0 35.0 41.0 31.0 41.0 41 36.71841304888532 39.0 35.0 41.0 31.0 41.0 42 36.889796031167684 39.0 35.0 41.0 32.0 41.0 43 36.90128391420015 40.0 35.0 41.0 32.0 41.0 44 36.953543745736404 40.0 35.0 41.0 32.0 41.0 45 36.94206168082652 39.0 35.0 41.0 32.0 41.0 46 36.765891838192196 39.0 35.0 41.0 32.0 41.0 47 36.723636268430724 39.0 35.0 41.0 31.0 41.0 48 36.761333339151456 39.0 35.0 41.0 32.0 41.0 49 36.72557515778021 39.0 35.0 41.0 32.0 41.0 50 36.63785677818553 39.0 35.0 41.0 32.0 41.0 51 35.756645386883335 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 30.0 10 33.0 11 37.0 12 31.0 13 22.0 14 51.0 15 68.0 16 80.0 17 155.0 18 256.0 19 503.0 20 944.0 21 1670.0 22 2403.0 23 3077.0 24 4180.0 25 5371.0 26 6248.0 27 6746.0 28 7494.0 29 8712.0 30 11167.0 31 15326.0 32 22390.0 33 36170.0 34 51095.0 35 53139.0 36 81092.0 37 135355.0 38 175222.0 39 58434.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.63507717012336 18.927952733572166 21.978539854866934 18.458430241437544 2 29.749515277662624 27.596519017260917 24.532986573227618 18.120979131848838 3 31.115901365367915 25.071017458731333 26.945325647593403 16.86775552830735 4 28.573672704423377 24.308697947802713 28.618617701347045 18.499011646426872 5 28.39912902704991 27.396230147474864 24.431460334222052 19.773180491253182 6 25.417777564446613 35.29447700168871 24.747238937203548 14.540506496661123 7 76.28547782058946 6.083138062594272 12.963795277720807 4.6675888390954565 8 77.46510217350514 8.692275133198644 9.004562862632671 4.838059830663542 9 71.15825729774387 8.635839344181223 10.528474619167513 9.677428738907386 10 39.98388380045585 28.63098121182766 17.80665505951212 13.578479928204368 11 30.114311563373175 24.666221580289363 27.36932133054645 17.85014552579101 12 27.571791996299673 21.923122237300856 29.649007210108408 20.856078556291063 13 25.09836263485317 23.929501808708856 32.163454335737676 18.8086812207003 14 19.8421252438157 28.759561720826117 29.085231132192106 22.313081903166076 15 19.01173369871143 26.7059099034628 34.21448799794039 20.067868399885384 16 22.87016714011639 26.463294191913683 29.746606216373067 20.919932451596857 17 22.475698429252354 26.846126657619486 29.261956605532745 21.416218307595415 18 21.23338380554671 27.180959612047584 29.648570850914975 21.937085731490736 19 23.410961633845183 28.19636745516773 27.57979191484596 20.81287899614113 20 25.701411040178503 27.68655446417273 29.553008187552997 17.059026308095774 21 24.351024789565777 28.958396059967388 28.44276494639327 18.24781420407356 22 21.86581372989657 24.794365730094384 30.044203186294833 23.295617353714217 23 22.344063405899867 26.97237991758629 30.57205235728509 20.11150431922875 24 22.645878514691486 26.050643847989914 29.470681753058514 21.832795884260086 25 21.00924063318628 29.33759219906125 28.080150456649893 21.57301671110258 26 20.607062909904915 28.403492618984245 28.6267630729578 22.362681398153036 27 22.178101459330595 28.192003863233396 28.746034585829673 20.88386009160634 28 18.94424347679369 28.75170725534431 31.167537203257567 21.13651206460443 29 21.108875982353634 26.222569370202777 29.332646794869 23.335907852574593 30 20.775497558570315 28.315929874168553 30.371181675241125 20.537390892020007 31 22.286900351560057 27.82895301429658 26.78460001134534 23.099546622798023 32 23.184636665517587 28.597817913126704 26.18431521424509 22.03323020711062 33 22.235264513670405 29.106612732670357 26.616892628002333 22.041230125656902 34 20.32139309127034 27.43157524214299 28.362474854801476 23.884556811785192 35 20.331574805783795 26.928307639049493 28.149095209212415 24.591022345954297 36 20.070341101981505 31.365789730140932 26.345477209686592 22.21839195819097 37 20.189030802595465 29.06035865816639 29.313592443422394 21.437018095815752 38 20.435573746885485 30.310236841224892 26.164242691347145 23.089946720542482 39 21.485017607093454 27.36204867732256 28.346620470773388 22.806313244810596 40 21.420290993400794 26.741982263453316 29.17832109345796 22.65940564968793 41 19.239513197683806 28.0676414931048 28.760288986148502 23.932556323062894 42 19.250858536713082 27.592446331455534 29.288719969396677 23.86797516243471 43 21.527489901920998 27.2256137028423 27.351721509744625 23.895174885492075 44 20.631353571672726 27.040451951761945 28.419056096883377 23.909138379681952 45 21.313528444074024 26.217769419075005 27.28001314895703 25.188688987893944 46 21.773887393146545 28.791706848075727 26.680019257985737 22.75438650079199 47 19.28940359879972 27.613973384998264 30.547470789388324 22.54915222681369 48 20.33593839771813 26.949543786463266 29.100794610091242 23.61372320572736 49 20.099868074070518 26.08249806911057 31.13219210858944 22.685441748229472 50 20.395574154154065 27.007434106125466 28.778034260014806 23.81895747970566 51 19.750635266259106 25.47683150862464 27.958697147810856 26.813836077305396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 183.0 1 553.0 2 923.0 3 3059.5 4 5196.0 5 3680.5 6 2165.0 7 2103.5 8 2042.0 9 1998.0 10 1954.0 11 1947.5 12 1941.0 13 2014.0 14 2087.0 15 2017.5 16 1948.0 17 1859.0 18 1770.0 19 1854.0 20 1938.0 21 1976.5 22 2015.0 23 2416.5 24 2818.0 25 3747.0 26 6478.5 27 8281.0 28 9573.0 29 10865.0 30 12627.0 31 14389.0 32 15720.0 33 17051.0 34 19698.0 35 22345.0 36 23725.0 37 25105.0 38 26735.0 39 28365.0 40 31676.0 41 34987.0 42 37919.5 43 40852.0 44 57647.5 45 74443.0 46 67901.5 47 61360.0 48 58175.0 49 54990.0 50 50893.5 51 46797.0 52 43611.0 53 40425.0 54 37577.0 55 34729.0 56 32490.0 57 30251.0 58 29529.5 59 28808.0 60 26611.0 61 24414.0 62 22329.5 63 20245.0 64 17192.5 65 14140.0 66 11279.0 67 8418.0 68 6808.5 69 5199.0 70 4402.0 71 3605.0 72 2927.5 73 2250.0 74 1863.0 75 1154.0 76 832.0 77 696.5 78 561.0 79 440.0 80 319.0 81 251.5 82 184.0 83 157.0 84 130.0 85 76.5 86 23.0 87 14.0 88 5.0 89 5.0 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 687507.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.737656978019654 #Duplication Level Percentage of deduplicated Percentage of total 1 73.52818808561035 20.394996593339712 2 9.474596928500581 5.256062392154954 3 3.393863909573791 2.8241349886151554 4 1.725031201719223 1.9139329499867532 5 1.1125399803300022 1.542962617436317 6 0.848854606542431 1.4127142740291472 7 0.6674847971625106 1.296012503921572 8 0.5796033965459557 1.2861472157349456 9 0.5449116610544141 1.3603115463885223 >10 7.629733437262791 48.1515204916678 >50 0.4450392882445302 7.551431038947068 >100 0.042233858908131076 2.157405291876632 >500 0.0026396161817581923 0.4660979463818177 >1k 0.003695462654461469 1.6157476407090718 >5k 0.0015837697090549155 2.7705225088105525 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 6851 0.9964989447380171 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG 6437 0.9362813760441713 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC 5632 0.8191916591394707 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2690 0.3912687434455213 No Hit GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 1853 0.2695245284775282 No Hit GAACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT 1510 0.21963412736161234 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTACATCAT 1438 0.2091615067192043 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT 1345 0.19563437172276066 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTC 1136 0.16523468124688184 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTACATCATCGTA 1062 0.15447115447551807 No Hit CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 726 0.10559892481094738 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4545306447788896E-4 0.0 0.0 0.0644357075637048 0.0 2 1.4545306447788896E-4 0.0 0.0 0.5405035875998353 0.0 3 1.4545306447788896E-4 0.0 0.0 0.7124291098127001 0.0 4 1.4545306447788896E-4 0.0 0.0 1.1745334956589533 0.0 5 1.4545306447788896E-4 0.0 0.0 2.802007834102053 0.0 6 1.4545306447788896E-4 0.0 0.0 3.30862085767854 0.0 7 1.4545306447788896E-4 0.0 0.0 3.895378519782344 0.0 8 1.4545306447788896E-4 0.0 0.0 4.60606219282131 0.0 9 1.4545306447788896E-4 0.0 0.0 4.825405414053966 0.0 10 1.4545306447788896E-4 0.0 0.0 6.270336156577315 0.0 11 1.4545306447788896E-4 0.0 0.0 7.091709611683954 0.0 12 1.4545306447788896E-4 0.0 0.0 8.551622019848525 0.0 13 1.4545306447788896E-4 0.0 0.0 8.857655267510003 0.0 14 1.4545306447788896E-4 0.0 0.0 8.985799417315024 0.0 15 1.4545306447788896E-4 0.0 0.0 9.311614281745495 0.0 16 1.4545306447788896E-4 0.0 0.0 9.711755662124167 0.0 17 1.4545306447788896E-4 0.0 0.0 10.167314660068916 0.0 18 1.4545306447788896E-4 0.0 0.0 10.657055128165968 0.0 19 1.4545306447788896E-4 0.0 0.0 11.216613067212407 0.0 20 1.4545306447788896E-4 0.0 0.0 11.571809450667411 0.0 21 1.4545306447788896E-4 0.0 0.0 11.988968839589997 0.0 22 1.4545306447788896E-4 0.0 0.0 12.453400474467896 0.0 23 1.4545306447788896E-4 0.0 0.0 12.90110500693084 0.0 24 1.4545306447788896E-4 0.0 0.0 13.24815601877508 0.0 25 1.4545306447788896E-4 0.0 0.0 13.570480009658084 0.0 26 1.4545306447788896E-4 0.0 0.0 13.854404391518923 0.0 27 1.4545306447788896E-4 0.0 0.0 14.178328366111181 0.0 28 1.4545306447788896E-4 0.0 0.0 14.494106969092678 0.0 29 1.4545306447788896E-4 0.0 0.0 14.827630845940478 0.0 30 1.4545306447788896E-4 0.0 0.0 15.208426968743591 0.0 31 1.4545306447788896E-4 0.0 0.0 15.561005197037995 0.0 32 1.4545306447788896E-4 0.0 0.0 15.911401629365228 0.0 33 1.4545306447788896E-4 0.0 0.0 16.25583448604887 0.0 34 1.4545306447788896E-4 0.0 0.0 16.58644930160711 0.0 35 1.4545306447788896E-4 0.0 0.0 16.951245587317658 0.0 36 1.4545306447788896E-4 0.0 0.0 17.30731468915953 0.0 37 1.4545306447788896E-4 0.0 0.0 17.665420133904092 0.0 38 1.4545306447788896E-4 0.0 0.0 18.02992551348568 0.0 39 1.4545306447788896E-4 0.0 0.0 18.399230844195042 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACC 25 3.889163E-5 45.000004 33 TAACGCG 25 3.889163E-5 45.000004 1 ACGTAAG 25 3.889163E-5 45.000004 1 CGCGTTA 25 3.889163E-5 45.000004 15 CCATTCG 25 3.889163E-5 45.000004 10 TTGTGCG 40 6.8084773E-9 45.0 1 AAGACCG 20 7.031307E-4 45.0 36 TCGATAG 20 7.031307E-4 45.0 1 AACGCGT 20 7.031307E-4 45.0 44 TTGCGAG 40 6.8084773E-9 45.0 1 CATACGT 20 7.031307E-4 45.0 31 CTCGCGT 20 7.031307E-4 45.0 11 TCGTAGG 20 7.031307E-4 45.0 2 TTACGGA 20 7.031307E-4 45.0 26 ATCGGTA 20 7.031307E-4 45.0 24 CTAGGCG 20 7.031307E-4 45.0 1 TTTAGCG 30 2.1642245E-6 44.999996 1 CGTTTTT 1800 0.0 42.125 1 GCTACGA 100 0.0 40.500004 10 ACGTTAG 45 1.9263098E-8 40.000004 1 >>END_MODULE