##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551803_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 374670 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.60586916486508 28.0 25.0 31.0 16.0 33.0 2 27.628110070195106 31.0 25.0 33.0 16.0 34.0 3 27.584567752955934 31.0 25.0 33.0 16.0 34.0 4 31.6658606240158 35.0 28.0 35.0 19.0 37.0 5 33.26053060026156 35.0 32.0 35.0 28.0 37.0 6 33.188483198548056 35.0 32.0 35.0 28.0 37.0 7 33.97896015160008 35.0 33.0 37.0 31.0 37.0 8 33.950038700723304 35.0 35.0 37.0 30.0 37.0 9 36.06355993274081 39.0 35.0 39.0 30.0 39.0 10 35.4048309178744 37.0 34.0 39.0 31.0 39.0 11 35.99809699201965 37.0 35.0 39.0 31.0 39.0 12 35.91694024074519 37.0 35.0 39.0 31.0 39.0 13 35.95802706381616 37.0 35.0 39.0 31.0 39.0 14 36.838073504684125 39.0 36.0 40.0 31.0 41.0 15 37.05718632396509 39.0 35.0 40.0 32.0 41.0 16 36.51034777270665 38.0 34.0 40.0 31.0 41.0 17 36.76263111538154 38.0 35.0 40.0 32.0 41.0 18 36.5073584754584 38.0 35.0 40.0 31.0 41.0 19 35.99326874316065 37.0 34.0 40.0 30.0 41.0 20 36.48240318146636 38.0 35.0 40.0 31.0 41.0 21 36.72721061200523 38.0 35.0 40.0 32.0 41.0 22 37.14657164971842 39.0 35.0 40.0 32.0 41.0 23 37.47383564203165 39.0 35.0 40.0 33.0 41.0 24 37.47207409186751 39.0 35.0 41.0 33.0 41.0 25 36.563858862465636 38.0 35.0 40.0 31.0 41.0 26 36.727130541543225 38.0 35.0 40.0 31.0 41.0 27 37.02603090719833 39.0 35.0 40.0 32.0 41.0 28 37.018365494968904 39.0 35.0 40.0 32.0 41.0 29 37.01683348012918 39.0 35.0 40.0 32.0 41.0 30 36.72257186323965 39.0 35.0 40.0 31.0 41.0 31 36.887103317586146 39.0 35.0 40.0 32.0 41.0 32 36.723578082045535 39.0 35.0 40.0 31.0 41.0 33 36.779461926495316 39.0 35.0 40.0 31.0 41.0 34 36.64317399311394 39.0 35.0 40.0 31.0 41.0 35 36.54664104411882 39.0 35.0 41.0 31.0 41.0 36 36.48176261777031 39.0 35.0 41.0 31.0 41.0 37 36.625171484239466 39.0 35.0 41.0 31.0 41.0 38 36.565321482904956 39.0 35.0 40.0 31.0 41.0 39 36.46923959751248 39.0 35.0 40.0 31.0 41.0 40 36.28840846611685 39.0 35.0 40.0 30.0 41.0 41 36.0707315771212 38.0 35.0 40.0 30.0 41.0 42 36.22521151947047 39.0 35.0 40.0 31.0 41.0 43 36.22625243547655 39.0 35.0 40.0 31.0 41.0 44 36.36195051645448 39.0 35.0 40.0 31.0 41.0 45 36.390340833266606 39.0 35.0 40.0 31.0 41.0 46 36.20647236234553 39.0 35.0 40.0 31.0 41.0 47 36.08520030960579 38.0 35.0 40.0 30.0 41.0 48 36.1414711612886 38.0 35.0 40.0 31.0 41.0 49 36.15699148584088 38.0 35.0 40.0 31.0 41.0 50 36.04970507379828 38.0 35.0 40.0 31.0 41.0 51 35.1073664825046 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 10.0 10 7.0 11 13.0 12 18.0 13 22.0 14 29.0 15 28.0 16 39.0 17 85.0 18 134.0 19 273.0 20 493.0 21 911.0 22 1367.0 23 1892.0 24 2468.0 25 3316.0 26 3862.0 27 4242.0 28 4790.0 29 5627.0 30 7287.0 31 10059.0 32 15006.0 33 23959.0 34 32745.0 35 33083.0 36 47011.0 37 72346.0 38 81140.0 39 22407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.56118717805002 17.560253022659943 19.91939573491339 19.95916406437665 2 28.44316331705234 29.618330797768706 22.980756398964424 18.95774948621454 3 28.27421464221849 26.617556783302636 27.69210238343075 17.41612619104812 4 27.782848907038193 22.637521018496276 32.06501721514933 17.5146128593162 5 28.449035150932822 24.88509888702058 25.939359970107027 20.72650599193957 6 23.72888141564577 34.22238236314624 26.118450903461714 15.930285317746284 7 69.95275842741613 5.99620999813169 17.792724264019004 6.258307310433181 8 68.23524701737529 10.882643392852378 13.08244588571276 7.799663704059573 9 64.15779219046094 7.58133824432167 14.072116796113916 14.188752769103477 10 41.84615795233139 21.635038834174072 20.912536365334827 15.606266848159715 11 33.091787439613526 22.46803854058238 25.427976619425095 19.012197400378998 12 29.87295486694958 18.7634451650786 29.998131689219846 21.36546827875197 13 24.34489017001628 24.03875410361118 32.34873355219259 19.267622174179948 14 18.164251207729468 29.539061040382204 28.230442789654898 24.066244962233434 15 16.483839111751674 24.035551285130914 39.29938345744255 20.18122614567486 16 18.265406891397763 23.29783542851042 32.82728801345184 25.609469666639978 17 18.099927936584194 24.628873408599567 30.874102543571674 26.39709611124456 18 18.695919075453066 25.59132036191849 31.080417434008595 24.63234312861985 19 21.550964849067178 26.011156484372915 27.423599434168732 25.014279232391175 20 24.607254383857796 24.85600661915819 32.20700883444098 18.329730162543036 21 22.51367870392612 28.094589905783756 29.100008007046203 20.29172338324392 22 19.946619691995622 24.604852269997597 28.550991539221183 26.897536498785595 23 20.879707475912134 27.16630634958764 28.96175300931486 22.992233165185365 24 23.22950863426482 23.24365441588598 28.871807190327488 24.655029759521714 25 18.605439453385646 29.808898497344327 27.209544399071184 24.376117650198843 26 18.40392879066912 27.233298636133128 29.862011903808682 24.500760669389063 27 22.426401900338966 27.62377558918515 26.2719192889743 23.67790322150159 28 16.534817305895857 27.60989670910401 31.685750126778235 24.169535858221902 29 20.191368404195693 24.048095657511944 30.49403475058051 25.266501187711853 30 18.553126751541356 26.561507459898042 28.11754343822564 26.767822350334963 31 22.343128619852138 25.635892919102144 24.56428323591427 27.45669522513145 32 22.92817679558011 27.325646568980705 27.300557824218647 22.44561881122054 33 21.688952945258492 23.45744254944351 24.96890597058745 29.884698534710548 34 23.203619184882697 25.298796274054503 26.995756265513656 24.50182827554915 35 18.997517815677796 23.143032535297728 29.539327941922227 28.320121707102253 36 21.076680812448288 25.642832359142716 27.973149705073798 25.3073371233352 37 20.34803960818854 23.712600421704433 33.0109162729869 22.928443697120134 38 18.439693597032054 24.2402647663277 27.16977606960792 30.15026556703232 39 23.31304881629167 23.384578429017537 30.77081164758321 22.531561107107585 40 21.62035924947287 22.411188512557718 31.240291456481707 24.72816078148771 41 20.79136306616489 23.922118130621612 29.629807563989647 25.65671123922385 42 19.982384498358556 22.177382763498546 32.75575840072597 25.08447433741693 43 21.807724130568236 23.208690314143112 29.072250246883925 25.91133530840473 44 21.325433047748685 23.034937411588867 28.652147222889475 26.987482317772976 45 20.439053033336002 22.031921424186617 26.89086396028505 30.638161582192332 46 23.456908746363467 25.82512611097766 26.963461179171006 23.75450396348787 47 18.02733071769824 23.25646568980703 34.63207622707983 24.084127365414897 48 20.91440467611498 21.7548776256439 29.36504123628793 27.965676461953187 49 19.41842154429231 19.904449248672165 35.06312221421518 25.61400699282035 50 20.266901540021887 21.461285931619827 31.346785170950437 26.925027357407856 51 19.121627031787973 21.89660234339552 27.280273307176984 31.70149731763952 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 153.0 1 357.5 2 562.0 3 2095.5 4 3629.0 5 2555.5 6 1482.0 7 1431.5 8 1381.0 9 1356.5 10 1332.0 11 1315.0 12 1298.0 13 1260.0 14 1222.0 15 1179.5 16 1137.0 17 1137.5 18 1138.0 19 1044.5 20 951.0 21 925.0 22 899.0 23 1111.0 24 1323.0 25 1632.5 26 2441.5 27 2941.0 28 3402.5 29 3864.0 30 4373.0 31 4882.0 32 5712.0 33 6542.0 34 7685.0 35 8828.0 36 8620.0 37 8412.0 38 9180.5 39 9949.0 40 11632.0 41 13315.0 42 15442.0 43 17569.0 44 21130.0 45 24691.0 46 39537.5 47 54384.0 48 45059.0 49 35734.0 50 35263.0 51 34792.0 52 29963.0 53 25134.0 54 22639.5 55 20145.0 56 18675.0 57 17205.0 58 16210.0 59 15215.0 60 14373.0 61 13531.0 62 12415.5 63 11300.0 64 9872.0 65 8444.0 66 6788.0 67 5132.0 68 4549.0 69 3966.0 70 3375.0 71 2784.0 72 2588.5 73 2393.0 74 2082.0 75 1598.5 76 1426.0 77 1133.0 78 840.0 79 681.5 80 523.0 81 389.5 82 256.0 83 195.0 84 134.0 85 97.0 86 60.0 87 47.0 88 34.0 89 24.0 90 14.0 91 10.0 92 6.0 93 4.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 374670.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.95214429856252 #Duplication Level Percentage of deduplicated Percentage of total 1 69.21009265615746 19.345704968417955 2 12.65648446191652 7.075517599840101 3 4.724618633560182 3.9618966540285445 4 2.2996076115243125 2.571158551496012 5 1.3376719965535295 1.8695400335905246 6 0.9939079644498203 1.6669115305075157 7 0.6722166795291107 1.3152928338268781 8 0.5517133728411678 1.233725744728236 9 0.5278120581624466 1.3278130931050185 >10 6.643459848411731 41.959165860109884 >50 0.31569131576905357 5.5111194291082874 >100 0.05178532624602771 2.4677277370969275 >500 0.00497935829288728 1.0224437651840965 >1k 0.006971101610042191 3.3601738877041187 >5k 0.0029876149757323677 5.311808311255902 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTC 6818 1.8197346998692183 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCG 6611 1.7644860810846879 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGC 5653 1.5087944057437213 No Hit GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 3017 0.80524194624603 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2003 0.5346037846638375 No Hit CCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 1772 0.4729495289187819 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCTCGTTT 1547 0.4128966824138576 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCT 1402 0.37419595911068404 No Hit GAACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 1282 0.3421677743080578 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTA 1048 0.27971281394293646 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTC 954 0.25462406918087915 No Hit CTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 882 0.23540715829930337 TruSeq Adapter, Index 14 (95% over 23bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 664 0.17722262257453225 No Hit TCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 632 0.1686817732938319 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCC 541 0.1443937331518403 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24314730295993808 0.0 2 0.0 0.0 0.0 1.855232604692129 0.0 3 0.0 0.0 0.0 2.2761363333066433 0.0 4 2.6690154002188593E-4 0.0 0.0 3.1902741078816024 0.0 5 2.6690154002188593E-4 0.0 0.0 6.45207782848907 0.0 6 2.6690154002188593E-4 0.0 0.0 7.353137427602957 0.0 7 2.6690154002188593E-4 0.0 0.0 8.66549229989057 0.0 8 2.6690154002188593E-4 0.0 0.0 10.021885926281795 0.0 9 2.6690154002188593E-4 0.0 0.0 10.47828755971922 0.0 10 2.6690154002188593E-4 0.0 0.0 13.233245255825127 0.0 11 2.6690154002188593E-4 0.0 0.0 14.75218192008968 0.0 12 2.6690154002188593E-4 0.0 0.0 17.503936797715323 0.0 13 2.6690154002188593E-4 0.0 0.0 18.12955400752662 0.0 14 2.6690154002188593E-4 0.0 0.0 18.39965836602877 0.0 15 2.6690154002188593E-4 0.0 0.0 19.068513625323618 0.0 16 2.6690154002188593E-4 0.0 0.0 19.846264712947395 0.0 17 2.6690154002188593E-4 0.0 0.0 20.64109749913257 0.0 18 2.6690154002188593E-4 0.0 0.0 21.502121867243176 0.0 19 2.6690154002188593E-4 0.0 0.0 22.47524488216297 0.0 20 2.6690154002188593E-4 0.0 0.0 23.091520538073503 0.0 21 2.6690154002188593E-4 0.0 0.0 23.803346945311873 0.0 22 2.6690154002188593E-4 0.0 0.0 24.573357888275016 0.0 23 2.6690154002188593E-4 0.0 0.0 25.309739237195398 0.0 24 2.6690154002188593E-4 0.0 0.0 25.861958523500682 0.0 25 2.6690154002188593E-4 0.0 0.0 26.378946806523075 0.0 26 2.6690154002188593E-4 0.0 0.0 26.85803507086236 0.0 27 2.6690154002188593E-4 0.0 0.0 27.335255024421492 0.0 28 2.6690154002188593E-4 0.0 0.0 27.78098059625804 0.0 29 2.6690154002188593E-4 0.0 0.0 28.231777297355006 0.0 30 2.6690154002188593E-4 0.0 0.0 28.71620359249473 0.0 31 2.6690154002188593E-4 0.0 0.0 29.21611017695572 0.0 32 2.6690154002188593E-4 0.0 0.0 29.713614647556515 0.0 33 2.6690154002188593E-4 0.0 0.0 30.156137400912804 0.0 34 2.6690154002188593E-4 0.0 0.0 30.606667200469747 0.0 35 2.6690154002188593E-4 0.0 0.0 31.103104064910454 0.0 36 2.6690154002188593E-4 0.0 0.0 31.601676141671337 0.0 37 2.6690154002188593E-4 0.0 0.0 32.05300664584835 0.0 38 2.6690154002188593E-4 0.0 0.0 32.4683054421224 0.0 39 2.6690154002188593E-4 0.0 0.0 32.87746550297595 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 30 2.1615706E-6 45.000004 1 CGACAGG 30 2.1615706E-6 45.000004 2 GTAATAG 25 3.8857546E-5 45.000004 1 AACGGGC 30 2.1615706E-6 45.000004 4 TGCGACG 25 3.8857546E-5 45.000004 1 CGAGGGT 30 2.1615706E-6 45.000004 4 GCGGCAC 25 3.8857546E-5 45.000004 26 ACTTTGC 25 3.8857546E-5 45.000004 38 CACCGGG 30 2.1615706E-6 45.000004 3 TGTCGGA 25 3.8857546E-5 45.000004 20 TCAACGG 25 3.8857546E-5 45.000004 2 AACCGCC 20 7.027193E-4 45.0 33 ATGTGCG 20 7.027193E-4 45.0 12 AGTATGC 20 7.027193E-4 45.0 36 TAGCACG 20 7.027193E-4 45.0 1 GTAGCTA 20 7.027193E-4 45.0 16 TACGACG 20 7.027193E-4 45.0 1 TACTCAC 45 3.8380676E-10 45.0 30 TTAGTTA 20 7.027193E-4 45.0 13 AATTACG 20 7.027193E-4 45.0 2 >>END_MODULE