##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551801_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 340232 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.545313198053094 28.0 25.0 31.0 16.0 33.0 2 27.44563709468833 30.0 25.0 31.0 16.0 33.0 3 27.624664934515273 30.0 25.0 33.0 16.0 33.0 4 30.215517646782196 32.0 28.0 35.0 19.0 37.0 5 31.643560864351382 33.0 30.0 35.0 26.0 35.0 6 32.15685767358743 35.0 32.0 35.0 26.0 36.0 7 33.16540478261892 35.0 32.0 35.0 28.0 37.0 8 33.516006724823065 35.0 33.0 35.0 28.0 37.0 9 34.69027016859084 37.0 33.0 39.0 28.0 39.0 10 35.379223588610124 37.0 34.0 39.0 30.0 39.0 11 35.70586540948529 37.0 35.0 39.0 31.0 39.0 12 34.744738884055586 37.0 33.0 39.0 29.0 39.0 13 35.32610101342613 37.0 34.0 39.0 30.0 39.0 14 36.524321639351975 38.0 35.0 40.0 31.0 41.0 15 36.47548731453831 38.0 35.0 40.0 31.0 41.0 16 36.5771032707094 38.0 34.0 40.0 31.0 41.0 17 35.1778551106304 37.0 32.0 40.0 27.0 41.0 18 34.92291730348703 37.0 33.0 39.0 27.0 40.0 19 34.477712266923746 37.0 32.0 38.0 27.0 40.0 20 34.64018963530767 35.0 34.0 39.0 27.0 40.0 21 35.375499659056175 36.0 34.0 39.0 30.0 40.0 22 35.9633779303534 37.0 35.0 39.0 31.0 40.0 23 36.01172141362365 37.0 35.0 40.0 31.0 40.0 24 35.99172035552211 37.0 35.0 40.0 31.0 41.0 25 35.317653836205885 36.0 34.0 39.0 30.0 40.0 26 35.3762902960333 37.0 34.0 39.0 30.0 40.0 27 35.918673140680475 37.0 35.0 40.0 31.0 41.0 28 35.814144466128994 37.0 35.0 40.0 31.0 41.0 29 35.89836053046157 37.0 35.0 40.0 31.0 41.0 30 35.61189717604458 37.0 35.0 40.0 30.0 41.0 31 35.17581532601284 37.0 35.0 40.0 27.0 41.0 32 34.831653107291494 37.0 34.0 40.0 25.0 41.0 33 34.28958181476169 37.0 34.0 40.0 21.0 41.0 34 33.60976333795763 37.0 33.0 40.0 17.0 41.0 35 33.383141503444705 37.0 33.0 40.0 15.0 41.0 36 32.94828234851513 37.0 33.0 40.0 11.0 41.0 37 32.901246796303695 37.0 33.0 40.0 10.0 41.0 38 32.66006724823062 37.0 32.0 40.0 10.0 41.0 39 32.286924804251214 36.0 31.0 40.0 10.0 40.0 40 32.19946389522443 36.0 31.0 39.0 10.0 40.0 41 31.747325354464014 36.0 30.0 39.0 10.0 40.0 42 32.06156387406241 36.0 31.0 40.0 10.0 40.0 43 32.021644054645066 36.0 31.0 40.0 10.0 40.0 44 31.90078534646947 36.0 31.0 40.0 10.0 40.0 45 31.93326318512074 36.0 31.0 40.0 10.0 40.0 46 31.597357097509935 35.0 30.0 39.0 10.0 40.0 47 31.582602459498226 35.0 30.0 39.0 10.0 40.0 48 31.690002704037244 36.0 30.0 39.0 10.0 40.0 49 31.61408391920807 35.0 30.0 39.0 10.0 40.0 50 31.555500364457195 35.0 30.0 39.0 10.0 40.0 51 28.649974135295917 33.0 23.0 37.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 4.0 10 13.0 11 17.0 12 14.0 13 8.0 14 29.0 15 41.0 16 99.0 17 219.0 18 407.0 19 713.0 20 1127.0 21 1787.0 22 2415.0 23 3608.0 24 5601.0 25 8784.0 26 12165.0 27 13202.0 28 12338.0 29 11629.0 30 12106.0 31 14141.0 32 17975.0 33 23324.0 34 30803.0 35 46851.0 36 53415.0 37 46472.0 38 19365.0 39 1556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.08099179383479 11.09948505725505 14.766394695384328 32.05312845352583 2 39.6253144912883 31.64840461802535 16.707717087164053 12.018563803522303 3 21.095311434550542 30.39102729901949 37.41182487243998 11.101836393989984 4 19.331514966258318 15.562028263067553 51.6456417973618 13.460814973312326 5 26.438430247595758 18.13350889980954 38.0158244962261 17.412236356368595 6 16.66127818664911 31.615779820828138 40.253415316607494 11.469526675915258 7 50.862058830445115 4.319993416257143 39.955089468362765 4.862858284934986 8 46.36571515906793 13.360001410802042 32.49753109642832 7.77675233370171 9 42.46249617907781 5.698170660020222 32.42493357473724 19.414399586164734 10 28.10523407557196 16.96665804509864 39.34756283947424 15.580545039855156 11 22.792094805897154 16.66921394812951 42.62356274542077 17.915128500552562 12 19.30006583742858 13.37175809447671 47.89849279315291 19.4296832749418 13 17.685873168896517 16.114004561593266 52.966799125302735 13.233323144207482 14 16.22863222742129 22.872628089068638 41.713889346093254 19.184850337416822 15 12.369206894119307 17.36168261656752 55.01775259234874 15.251357896964423 16 13.780302852171458 20.86194126360836 40.79422276564227 24.56353311857791 17 14.014848691481108 18.7548496320158 46.28753321263138 20.94276846387171 18 14.713489618848316 19.246572926708836 45.843718403912625 20.196219050530225 19 14.273789649415694 21.89741117825484 41.800594888193935 22.02820428413553 20 15.354228879117779 21.11441604552188 48.067495120976275 15.463859954384068 21 15.575254532201557 25.559618142914246 43.02093865362458 15.84418867125961 22 13.512250464389005 17.881034117896025 43.1020597709798 25.50465564673517 23 14.969491405864233 24.361612076465473 43.82774107079875 16.841155446871547 24 19.16339438971055 17.681464412518515 39.47130193515013 23.6838392626208 25 13.282407298549225 27.707858167368148 38.52341931387994 20.486315220202687 26 14.415751604787323 17.4298713818806 42.37520280279339 25.77917421053869 27 18.488560746784547 20.29909003268358 37.70515413012298 23.507195090408896 28 11.753450586658515 18.542641491688023 46.08473041924334 23.61917750241012 29 17.324061228808578 17.344929342331113 37.154647417056594 28.17636201180371 30 15.158774013026404 19.747407651249734 40.90385384090855 24.189964494815303 31 19.000270403724517 17.986844270968046 40.04708551811705 22.965799807190386 32 17.699687272214256 25.355345764066872 34.397999012438575 22.5469679512803 33 15.348644454372309 18.94795316137224 33.96447130193515 31.7389310823203 34 22.509934397705095 18.516188953420016 34.75892920125091 24.214947447623974 35 14.734063815278986 21.47593406851795 30.03773895459569 33.752263161607374 36 16.275658962119966 24.47124315173176 34.47089045122152 24.782207434926757 37 16.687436807825247 24.304298243551457 35.251534247219546 23.756730701403747 38 16.15368336899527 22.934644595452514 32.7361917750241 28.17548026052811 39 24.423040748665617 23.97187801265019 31.819464365491783 19.78561687319241 40 18.4200780643796 19.42938935784994 33.99739001622422 28.15314256154624 41 19.496696371887417 27.41776199769569 29.780267582120434 23.305274048296457 42 17.771403042629736 20.71204354675633 37.257812316301816 24.258741094312118 43 20.738790002116204 23.274118836558582 30.745491311810763 25.24159984951445 44 19.718309859154928 19.534317759646356 34.19343271649933 26.55393966469938 45 18.011239389592983 17.536269369136352 34.15845658256719 30.294034658703474 46 24.776329093089423 21.801888123398154 32.429342331115244 20.992440452397187 47 15.03444708316678 18.2690046791601 44.63924616144278 22.057302076230336 48 18.81333913329728 20.856944673046627 33.94830586188248 26.381410331773615 49 17.078640457099862 17.001928096122647 42.90425356815349 23.015177878623998 50 19.318582614216183 16.00496132051071 38.54840226668861 26.128053798584496 51 18.035046674034188 16.370006348609184 33.68701356721296 31.90793341014367 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 168.0 1 392.0 2 616.0 3 12522.5 4 24429.0 5 16026.5 6 7624.0 7 7039.0 8 6454.0 9 6207.0 10 5960.0 11 5655.0 12 5350.0 13 5022.0 14 4694.0 15 4338.0 16 3982.0 17 3730.0 18 3478.0 19 3164.0 20 2850.0 21 2611.5 22 2373.0 23 2299.5 24 2226.0 25 2239.5 26 2420.0 27 2587.0 28 2578.5 29 2570.0 30 2867.0 31 3164.0 32 3433.5 33 3703.0 34 3946.0 35 4189.0 36 4616.0 37 5043.0 38 5407.5 39 5772.0 40 6176.0 41 6580.0 42 7452.0 43 8324.0 44 9973.5 45 11623.0 46 13719.5 47 15816.0 48 42441.5 49 69067.0 50 49979.0 51 30891.0 52 29510.0 53 28129.0 54 22522.0 55 16915.0 56 14520.5 57 12126.0 58 10613.5 59 9101.0 60 8587.0 61 8073.0 62 7394.0 63 6715.0 64 5971.0 65 5227.0 66 4379.0 67 3531.0 68 2991.0 69 2451.0 70 2167.0 71 1883.0 72 1603.0 73 1323.0 74 1225.5 75 937.0 76 746.0 77 610.5 78 475.0 79 377.5 80 280.0 81 221.0 82 162.0 83 127.0 84 92.0 85 67.0 86 42.0 87 35.0 88 28.0 89 17.5 90 7.0 91 8.0 92 9.0 93 6.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 340232.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.99163690993326 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8628520658473 38.32748998935858 2 9.112965850038828 8.746922964953697 3 3.9962575555374866 5.753608248117976 4 2.4001668058636483 4.6075173548113 5 1.5479271604514415 3.71437791237048 6 0.9108292047082406 2.62273106875927 7 0.6022726955503871 2.0232836767934668 8 0.395965285493988 1.520241776829243 9 0.2527748152123348 1.0917969436481263 >10 0.8236523459803895 6.827131033265857 >50 0.0608220335589513 1.9979907715504859 >100 0.023584053828981117 1.9953101041467955 >500 0.003723797972997019 1.1065199338565974 >1k 0.003723797972997019 4.816265768630196 >5k 6.206329954995031E-4 2.9246081374260915 >10k+ 0.0018618989864985095 11.924204315481836 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15194 4.465776293823039 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 13297 3.908215570551859 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG 11543 3.392684991417621 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC 9819 2.885971925039385 No Hit GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 4155 1.2212255167062476 No Hit GAACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT 3658 1.0751487220484846 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCT 2541 0.7468433304333513 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTC 2493 0.7327353100237485 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTA 2249 0.6610195396082673 No Hit CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT 1074 0.315666956664864 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCC 834 0.24512685461684966 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTT 673 0.19780620282630676 No Hit CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 579 0.17017799619083449 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATG 576 0.16929624491523432 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCTACGCATCGT 542 0.15930306379176562 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTAT 511 0.15019163394389712 No Hit TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 445 0.13079310588069318 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT 439 0.12902960332949281 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC 351 0.1031648992452209 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9391709186672623E-4 0.0 0.0 0.3697477015683416 0.0 2 2.9391709186672623E-4 0.0 0.0 2.1414799313409674 0.0 3 2.9391709186672623E-4 0.0 0.0 2.560605704342919 0.0 4 2.9391709186672623E-4 0.0 0.0 4.328517011921277 0.0 5 2.9391709186672623E-4 0.0 0.0 9.939100378565215 0.0 6 2.9391709186672623E-4 0.0 0.0 11.060100166944908 0.0 7 2.9391709186672623E-4 0.0 0.0 12.758940957934586 0.0 8 2.9391709186672623E-4 0.0 0.0 14.897775635448752 0.0 9 2.9391709186672623E-4 0.0 0.0 15.527639963319148 0.0 10 2.9391709186672623E-4 0.0 0.0 20.38608949187613 0.0 11 2.9391709186672623E-4 0.0 0.0 21.97529920759952 0.0 12 2.9391709186672623E-4 0.0 0.0 26.686496273131276 0.0 13 2.9391709186672623E-4 0.0 0.0 27.53268358061558 0.0 14 2.9391709186672623E-4 0.0 0.0 27.950339768158198 0.0 15 2.9391709186672623E-4 0.0 0.0 29.09132591878483 0.0 16 2.9391709186672623E-4 0.0 0.0 30.072127254344096 0.0 17 2.9391709186672623E-4 0.0 0.0 30.912436219991065 0.0 18 2.9391709186672623E-4 0.0 0.0 31.928801523666205 0.0 19 2.9391709186672623E-4 0.0 0.0 32.65154365256648 0.0 20 2.9391709186672623E-4 0.0 0.0 33.281114063345015 0.0 21 2.9391709186672623E-4 0.0 0.0 33.92244115779821 0.0 22 2.9391709186672623E-4 0.0 0.0 34.548190646382466 0.0 23 2.9391709186672623E-4 0.0 0.0 35.06636647934351 0.0 24 2.9391709186672623E-4 0.0 0.0 35.47814432504879 0.0 25 2.9391709186672623E-4 0.0 0.0 35.8428954360554 0.0 26 2.9391709186672623E-4 0.0 0.0 36.207646547062005 0.0 27 2.9391709186672623E-4 0.0 0.0 36.58973876648875 0.0 28 2.9391709186672623E-4 0.0 0.0 36.935973100707756 0.0 29 2.9391709186672623E-4 0.0 0.0 37.29572762115262 0.0 30 2.9391709186672623E-4 0.0 0.0 37.70750546685791 0.0 31 2.9391709186672623E-4 0.0 0.0 38.097239530673185 0.0 32 2.9391709186672623E-4 0.0 0.0 38.444061699075924 0.0 33 2.9391709186672623E-4 0.0 0.0 38.79529262385666 0.0 34 2.9391709186672623E-4 0.0 0.0 39.123891932563666 0.0 35 5.878341837334525E-4 0.0 0.0 39.456606080556796 0.0 36 5.878341837334525E-4 0.0 0.0 39.77873921324273 0.0 37 5.878341837334525E-4 0.0 0.0 40.09293658444826 0.0 38 5.878341837334525E-4 0.0 0.0 40.4274142349926 0.0 39 5.878341837334525E-4 0.0 0.0 40.7824660819676 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 20 7.0262764E-4 45.000004 4 TAGTTAA 20 7.0262764E-4 45.000004 38 ACCCACG 20 7.0262764E-4 45.000004 20 GTGCTAG 25 3.884997E-5 45.0 1 GACCTAT 25 3.884997E-5 45.0 33 GGATACC 30 2.1609812E-6 44.999996 8 CGTTTTT 7280 0.0 44.103706 1 GTACGGG 85 0.0 42.35294 3 TTACGGG 55 6.002665E-11 40.909092 3 GAATGAC 305 0.0 40.573772 1 GCGCGAC 50 1.0768417E-9 40.5 9 CGCGACC 50 1.0768417E-9 40.5 10 AAACACG 50 1.0768417E-9 40.5 40 TAAGCGG 45 1.9213985E-8 40.0 2 ATGGGAC 85 0.0 39.705883 5 TATGGGA 85 0.0 39.705883 4 GTTTTTT 8215 0.0 39.63177 2 CCGGGAT 40 3.4486584E-7 39.375004 5 GGTTATG 40 3.4486584E-7 39.375004 1 AATGACT 310 0.0 39.193546 2 >>END_MODULE