##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551790_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 512136 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.869528797038285 28.0 16.0 31.0 16.0 33.0 2 25.933709014792946 28.0 16.0 31.0 16.0 33.0 3 26.586840214318073 30.0 23.0 33.0 16.0 33.0 4 28.941900198384804 32.0 19.0 35.0 19.0 37.0 5 31.237522845494166 33.0 28.0 35.0 19.0 37.0 6 30.041223425027727 33.0 28.0 35.0 17.0 37.0 7 32.28749199431401 33.0 32.0 35.0 28.0 37.0 8 33.05736562163175 35.0 33.0 35.0 28.0 37.0 9 34.296247481137826 37.0 32.0 38.0 28.0 39.0 10 34.00204242623053 35.0 32.0 39.0 27.0 39.0 11 34.35678999328304 37.0 32.0 39.0 27.0 39.0 12 34.64588703000766 37.0 33.0 39.0 27.0 39.0 13 34.88595412156146 37.0 34.0 39.0 29.0 39.0 14 35.16983769936111 37.0 33.0 40.0 27.0 41.0 15 35.72779496071356 38.0 34.0 40.0 27.0 41.0 16 35.522710764328224 37.0 33.0 40.0 27.0 41.0 17 34.53646101816705 37.0 32.0 40.0 25.0 41.0 18 34.628053876314105 37.0 32.0 39.0 27.0 40.0 19 34.12338714716403 37.0 32.0 39.0 25.0 40.0 20 34.41856264742178 35.0 33.0 38.0 27.0 40.0 21 35.03341885749098 36.0 34.0 39.0 29.0 40.0 22 35.82273068091288 37.0 34.0 39.0 30.0 40.0 23 36.351408610212914 38.0 35.0 40.0 31.0 40.0 24 35.48788017245419 36.0 34.0 39.0 30.0 40.0 25 34.25730665292032 36.0 33.0 39.0 25.0 40.0 26 34.71803583423153 36.0 33.0 39.0 27.0 40.0 27 35.407836980801974 37.0 34.0 39.0 30.0 40.0 28 35.509122576815535 37.0 34.0 39.0 30.0 40.0 29 35.63794773263352 38.0 35.0 40.0 30.0 41.0 30 34.386963619038696 36.0 33.0 39.0 25.0 40.0 31 34.4891142196604 36.0 33.0 39.0 25.0 40.0 32 34.37623209459987 36.0 33.0 39.0 25.0 40.0 33 34.23511918709093 37.0 33.0 40.0 22.0 40.0 34 34.1854214505522 38.0 34.0 40.0 21.0 40.0 35 34.05560632332037 38.0 34.0 40.0 18.0 41.0 36 33.57014738272646 37.0 33.0 40.0 15.0 41.0 37 33.719078526016524 37.0 33.0 40.0 15.0 41.0 38 33.27712560726057 37.0 33.0 40.0 15.0 41.0 39 33.24925996219754 37.0 33.0 40.0 15.0 40.0 40 32.91164846837559 37.0 32.0 40.0 15.0 41.0 41 32.53839214583626 36.0 31.0 39.0 13.0 40.0 42 33.05639127106862 37.0 33.0 40.0 14.0 40.0 43 32.97914225908743 37.0 33.0 40.0 14.0 40.0 44 33.2390790727463 37.0 33.0 40.0 15.0 40.0 45 33.234051111423526 37.0 33.0 40.0 15.0 40.0 46 33.059946967211836 37.0 33.0 40.0 15.0 40.0 47 33.03601191870909 36.0 32.0 40.0 15.0 41.0 48 32.90856725557274 36.0 32.0 40.0 15.0 40.0 49 32.961849977349765 36.0 33.0 40.0 15.0 40.0 50 32.92463915834856 36.0 33.0 39.0 15.0 40.0 51 31.60869183185716 35.0 30.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 9.0 10 16.0 11 14.0 12 23.0 13 31.0 14 48.0 15 70.0 16 135.0 17 280.0 18 503.0 19 921.0 20 1441.0 21 2185.0 22 3210.0 23 4916.0 24 7771.0 25 11850.0 26 15787.0 27 17346.0 28 16515.0 29 16996.0 30 20153.0 31 25754.0 32 33282.0 33 42274.0 34 56826.0 35 79745.0 36 80320.0 37 55873.0 38 17011.0 39 825.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.91315588046925 12.786252089288782 16.868761422747085 29.431830607494884 2 39.00331162035084 26.067880406766953 19.49775059749754 15.431057375384663 3 25.210686223971756 24.399573550775575 35.795960448006 14.593779777246668 4 22.362419357358203 19.310495649593076 42.80269303466267 15.524391958386053 5 25.592811284502552 22.07811987440836 34.885655372791604 17.443413468297482 6 21.012973116515926 29.190488464001753 35.74890263523752 14.047635784244811 7 60.94084383835544 4.6339253635753 30.284729056344407 4.140501741724854 8 59.11886686348938 9.258282956089788 25.075956386584814 6.546893793836012 9 52.98592561350891 5.89023228205008 26.15906712279551 14.964774981645501 10 31.1222019151163 20.041551462892667 33.033608260305854 15.802638361685178 11 24.89436399706328 19.750417857756535 37.276817095459016 18.07840104972117 12 20.876095412156147 16.883601230923038 42.69295655841417 19.547346798506645 13 19.758423543746193 18.578463533124015 45.98544136713685 15.677671555992939 14 17.976474998828436 22.797460049674307 39.79470296952372 19.431361981973538 15 16.072879078994642 20.13254291828733 46.84790758704719 16.946670415670837 16 17.70623428151897 21.17230579377353 38.70983488760798 22.41162503709952 17 17.842721464610964 20.805411062686474 40.64603933330209 20.705828139400474 18 18.4394379617914 20.831575987628288 39.84547073433619 20.88351531624412 19 18.08894512395145 22.841198431666587 37.847759188965426 21.222097255416532 20 19.356967680459878 22.004116094162487 41.58485246106503 17.054063764312605 21 19.412226439851914 24.286322383116985 38.42573066529203 17.87572051173907 22 17.75212053048409 19.33431744692816 39.50200727931643 23.411554743271317 23 18.607557367574238 23.401401190308825 39.39754284018308 18.59349860193386 24 20.46311917147008 20.560554227783246 37.38303888029742 21.593287720449254 25 17.86712904384773 25.438555383726197 35.94299170532827 20.751323867097803 26 18.92641798272334 19.956417826514834 38.322437789962045 22.794726400799785 27 21.801240295546496 20.838800631082368 35.82993579830357 21.53002327506756 28 18.247887279941267 21.686622303450644 39.428784541606134 20.636705875001955 29 24.65185028976678 19.354038770951465 35.714732024306045 20.27937891497571 30 22.82616336285674 23.056570910851807 36.284893075276884 17.832372651014573 31 22.05449333770717 23.001702672727557 34.130973022790826 20.812830966774452 32 22.49031507255885 24.19240201821391 35.76374244341347 17.553540465813768 33 19.47861505537592 24.520830404423823 32.69365949669619 23.30689504350407 34 24.035217207929144 22.78301076276614 32.25725197994283 20.924520049361888 35 24.39039630098255 22.164620335223457 32.169970476592155 21.275012887201836 36 22.668588031304186 25.725588515550555 33.26401580830092 18.341807644844337 37 22.4290032335161 23.582407797928674 35.42086477029539 18.56772419825984 38 21.010044207007514 28.349305653185873 30.208382148491808 20.432267991314806 39 22.58872643204149 22.344455379039942 33.841010981458055 21.225807207460516 40 23.249683677773092 24.80669197244482 33.54070012652889 18.402924223253198 41 19.73225861880438 25.16538575690832 33.384491619413595 21.717864004873704 42 22.731266694784196 22.98491025821266 34.741748285611635 19.542074761391508 43 23.186223971757503 21.785228923567175 33.66176171954325 21.366785385132076 44 21.796944561600824 22.26146960963494 32.620827280253685 23.32075854851055 45 20.87961010356624 21.204328537732163 32.473991283565304 25.442070075136293 46 24.233406751331678 22.883765249855507 32.60130121686427 20.281526781948543 47 19.275153474858243 21.596216629957667 38.64207944764672 20.486550447537372 48 20.437344767796052 22.73243825858756 33.04708124404455 23.783135729571832 49 19.321820766358936 20.76011059562304 38.42065388881078 21.49741474920724 50 20.153045284846215 20.056977052970304 36.544589718356065 23.24538794382742 51 19.94255432150835 19.96012777855882 33.54675320617961 26.55056469375322 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 104.0 1 411.5 2 719.0 3 13860.5 4 27002.0 5 18239.5 6 9477.0 7 8892.0 8 8307.0 9 8033.0 10 7759.0 11 7358.0 12 6957.0 13 6550.0 14 6143.0 15 5570.5 16 4998.0 17 4518.5 18 4039.0 19 3724.0 20 3409.0 21 3358.5 22 3308.0 23 3214.0 24 3120.0 25 3397.0 26 3876.5 27 4079.0 28 4591.5 29 5104.0 30 5671.5 31 6239.0 32 6891.5 33 7544.0 34 8279.0 35 9014.0 36 9635.5 37 10257.0 38 10902.5 39 11548.0 40 12605.0 41 13662.0 42 15260.0 43 16858.0 44 19699.0 45 22540.0 46 47950.5 47 73361.0 48 57623.5 49 41886.0 50 40662.5 51 39439.0 52 34276.0 53 29113.0 54 26301.0 55 23489.0 56 21754.0 57 20019.0 58 19051.0 59 18083.0 60 17545.5 61 17008.0 62 15887.0 63 14766.0 64 13423.0 65 12080.0 66 10364.0 67 8648.0 68 7367.5 69 6087.0 70 5182.0 71 4277.0 72 3610.0 73 2943.0 74 2510.0 75 1716.0 76 1355.0 77 1106.5 78 858.0 79 644.5 80 431.0 81 328.5 82 226.0 83 151.0 84 76.0 85 54.5 86 33.0 87 22.0 88 11.0 89 7.0 90 3.0 91 4.0 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 512136.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.1651755378998 #Duplication Level Percentage of deduplicated Percentage of total 1 75.63045494359662 36.42754138369553 2 9.804553617877103 9.444760921516025 3 4.799716531810118 6.935375678603818 4 3.141857931614018 6.053125551653278 5 2.0819405778037527 5.013851669469715 6 1.4605652490741863 4.220902896372871 7 0.9176100503473543 3.093779440522498 8 0.6515049893625083 2.5103881741170206 9 0.3924213135250429 1.7010937305672214 >10 1.0489677325654823 7.805757076733237 >50 0.039526771893458816 1.2664328757538625 >100 0.025115969631345915 2.481899065986997 >500 0.0012352116212137336 0.32860621273195795 >1k 0.0028821604494987116 3.268808813796538 >5k 8.23474414142489E-4 3.60990880528656 >10k+ 8.23474414142489E-4 5.837767703192907 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15800 3.085118015527126 No Hit GAATCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC 13637 2.6627692644141403 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCG 9387 1.8329115703641221 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGC 8816 1.7214177484105784 No Hit GAACTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT 4874 0.9517003295999501 No Hit GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 3675 0.7175828295608979 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGATACGTT 1796 0.35068809847384286 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT 1638 0.31983691831857164 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGATACGTTCGTA 1618 0.3159317056406892 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTC 1587 0.3098786259899714 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT 1295 0.2528625208928878 No Hit CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGCT 592 0.11559429526532014 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCC 543 0.10602652420450819 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGATACGTTCGT 522 0.10192605089273163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12067107174656731 0.0 2 0.0 0.0 0.0 1.0505022103503756 0.0 3 0.0 0.0 0.0 1.3014121249043222 0.0 4 0.0 0.0 0.0 2.6969398753456115 0.0 5 0.0 0.0 0.0 6.267866348001312 0.0 6 0.0 0.0 0.0 7.316220691378852 0.0 7 0.0 0.0 0.0 8.337824327912898 0.0 8 0.0 0.0 0.0 9.637088585844385 0.0 9 0.0 0.0 0.0 10.349985160191824 0.0 10 0.0 0.0 0.0 13.20821031913398 0.0 11 0.0 0.0 0.0 14.195252823468767 0.0 12 0.0 0.0 0.0 16.947451458206412 0.0 13 0.0 0.0 0.0 17.529523407844792 0.0 14 0.0 0.0 0.0 17.829639002140055 0.0 15 1.9526063389412187E-4 0.0 0.0 18.439633222425293 0.0 16 1.9526063389412187E-4 0.0 0.0 18.935595232516363 0.0 17 1.9526063389412187E-4 0.0 0.0 19.476076667135292 0.0 18 1.9526063389412187E-4 0.0 0.0 20.106768514613307 0.0 19 1.9526063389412187E-4 0.0 0.0 20.826303950513147 0.0 20 1.9526063389412187E-4 0.0 0.0 21.243575925144885 0.0 21 1.9526063389412187E-4 0.0 0.0 21.620233687926646 0.0 22 1.9526063389412187E-4 0.0 0.0 22.045511348548043 0.0 23 1.9526063389412187E-4 0.0 0.0 22.4223643719637 0.0 24 1.9526063389412187E-4 0.0 0.0 22.73321930112314 0.0 25 1.9526063389412187E-4 0.0 0.0 23.01127044378837 0.0 26 1.9526063389412187E-4 0.0 0.0 23.26862395926082 0.0 27 1.9526063389412187E-4 0.0 0.0 23.566201165315462 0.0 28 1.9526063389412187E-4 0.0 0.0 23.840542355936705 0.0 29 1.9526063389412187E-4 0.0 0.0 24.123279753815392 0.0 30 1.9526063389412187E-4 0.0 0.0 24.447412406079636 0.0 31 1.9526063389412187E-4 0.0 0.0 24.76217254791696 0.0 32 1.9526063389412187E-4 0.0 0.0 25.07400378024587 0.0 33 1.9526063389412187E-4 0.0 0.0 25.39794117187622 0.0 34 1.9526063389412187E-4 0.0 0.0 25.69297998969024 0.0 35 1.9526063389412187E-4 0.0 0.0 26.00520174328694 5.857819016823657E-4 36 1.9526063389412187E-4 0.0 0.0 26.30414577377884 5.857819016823657E-4 37 1.9526063389412187E-4 0.0 0.0 26.599965634128434 5.857819016823657E-4 38 1.9526063389412187E-4 0.0 0.0 26.907891653779465 5.857819016823657E-4 39 1.9526063389412187E-4 0.0 0.0 27.246083071684083 5.857819016823657E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCAGG 35 1.2101555E-7 45.0 2 ATCCGTT 20 7.0296193E-4 45.0 28 TTAAGCG 20 7.0296193E-4 45.0 1 CTTGACG 25 3.887766E-5 45.0 1 CGGTATG 20 7.0296193E-4 45.0 1 TGTAACG 25 3.887766E-5 45.0 1 TAGCGAC 30 2.163135E-6 44.999996 30 GTAGCGA 30 2.163135E-6 44.999996 29 TCGGTAG 30 2.163135E-6 44.999996 26 CGTTTTT 8140 0.0 44.170757 1 CGAGACA 115 0.0 41.08696 22 GTGCAAG 55 6.002665E-11 40.909092 1 ACGACCA 110 0.0 40.909092 28 CCCTCGT 80 0.0 39.375 14 ACGGGTA 40 3.453224E-7 39.375 5 CGTGTAC 80 0.0 39.375 18 GCGAGAC 120 0.0 39.374996 21 ACACGAC 115 0.0 39.130436 26 CACGACC 115 0.0 39.130436 27 AACACGT 115 0.0 39.130436 41 >>END_MODULE