##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551784_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 355665 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.126214274668577 31.0 30.0 33.0 28.0 34.0 2 31.041027371262285 31.0 31.0 34.0 28.0 34.0 3 30.91764160094471 31.0 30.0 34.0 27.0 34.0 4 34.883435255085544 35.0 35.0 37.0 32.0 37.0 5 34.564390648503505 35.0 35.0 37.0 32.0 37.0 6 34.761604318670656 35.0 35.0 37.0 32.0 37.0 7 35.19769445967413 36.0 35.0 37.0 32.0 37.0 8 34.27334148707351 35.0 35.0 37.0 30.0 37.0 9 36.17796803171524 39.0 35.0 39.0 32.0 39.0 10 36.100934868485794 37.0 35.0 39.0 32.0 39.0 11 36.55534562017629 38.0 35.0 39.0 32.0 39.0 12 36.661113688442775 39.0 35.0 39.0 32.0 39.0 13 36.58648728438278 39.0 35.0 39.0 32.0 39.0 14 37.61350990398268 39.0 36.0 41.0 32.0 41.0 15 37.58132793499501 39.0 36.0 41.0 32.0 41.0 16 37.864296458746296 39.0 37.0 41.0 33.0 41.0 17 37.507418497743664 39.0 36.0 41.0 32.0 41.0 18 37.581429153838585 39.0 36.0 40.0 33.0 41.0 19 37.52663883148468 39.0 36.0 40.0 32.0 41.0 20 37.20439458479187 39.0 35.0 40.0 32.0 41.0 21 37.33004090928261 39.0 35.0 40.0 32.0 41.0 22 37.386231425639295 39.0 35.0 41.0 32.0 41.0 23 37.36565869568273 39.0 35.0 41.0 32.0 41.0 24 37.30002389889362 39.0 35.0 41.0 32.0 41.0 25 37.07490194424529 39.0 35.0 40.0 32.0 41.0 26 37.08400320526338 39.0 35.0 40.0 32.0 41.0 27 37.043110792459196 39.0 35.0 41.0 31.0 41.0 28 36.866332082155964 39.0 35.0 41.0 31.0 41.0 29 36.90411201552022 39.0 35.0 41.0 31.0 41.0 30 36.61750804830388 39.0 35.0 40.0 30.0 41.0 31 36.62620443394768 39.0 35.0 40.0 30.0 41.0 32 36.41961677421169 39.0 35.0 40.0 30.0 41.0 33 36.34290413732023 39.0 35.0 41.0 30.0 41.0 34 36.12515710008013 39.0 35.0 41.0 29.0 41.0 35 36.152202212756386 39.0 35.0 41.0 29.0 41.0 36 36.086109119536644 39.0 35.0 40.0 29.0 41.0 37 35.93755078514894 39.0 35.0 41.0 29.0 41.0 38 35.59456792206149 39.0 35.0 40.0 26.0 41.0 39 35.71767252892469 39.0 35.0 40.0 27.0 41.0 40 35.56248998355194 39.0 35.0 40.0 26.0 41.0 41 35.40940491754882 38.0 35.0 40.0 25.0 41.0 42 35.433101373483474 38.0 35.0 40.0 26.0 41.0 43 35.514239523146784 38.0 35.0 40.0 27.0 41.0 44 35.66840144518016 39.0 35.0 40.0 27.0 41.0 45 35.73850955252836 39.0 35.0 40.0 28.0 41.0 46 35.662457649754685 39.0 35.0 40.0 27.0 41.0 47 35.412688906695905 38.0 35.0 40.0 26.0 41.0 48 35.457152095370645 38.0 35.0 40.0 26.0 41.0 49 35.51924985590373 38.0 35.0 40.0 27.0 41.0 50 35.40227742398043 38.0 35.0 40.0 26.0 41.0 51 34.51406239017052 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 18.0 10 17.0 11 19.0 12 15.0 13 19.0 14 21.0 15 24.0 16 47.0 17 73.0 18 167.0 19 403.0 20 1083.0 21 1789.0 22 2125.0 23 2738.0 24 3343.0 25 3785.0 26 4194.0 27 4538.0 28 4825.0 29 5465.0 30 6705.0 31 8518.0 32 11149.0 33 15463.0 34 23810.0 35 27714.0 36 30825.0 37 46385.0 38 76440.0 39 73924.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.10145783251093 17.204672936611697 18.463441721844994 13.230427509032374 2 29.56489955435592 35.373736521726904 19.02323815950403 16.03812576441314 3 28.730968748682045 34.284228136026876 23.251936513292 13.732866601999072 4 26.901438151069122 20.900004217451816 35.67711188899667 16.521445742482392 5 33.41093444674061 26.073130614482732 21.644525044634698 18.871409894141962 6 22.41969268834437 41.23177709361337 23.559529332377377 12.78900088566488 7 64.3602828504351 7.098533732585438 23.52213459294561 5.0190488240338516 8 61.082479299340676 18.640855861555114 13.624618672065006 6.652046167039208 9 54.79116584426357 10.484022886705185 14.82574894915159 19.89906231987966 10 40.426243796831294 21.3273726681006 22.72503619979475 15.521347335273362 11 33.14635963617449 22.711259190530413 26.226364697116665 17.916016476178427 12 26.241547523652876 20.3596080581446 28.949432752730804 24.44941166547172 13 25.769755247212967 23.512575035496887 33.53324054939339 17.184429167896756 14 18.936077488648024 31.535855369519073 27.1120295783954 22.416037563437506 15 17.435226969198546 25.538638887717376 35.540466450170804 21.485667692913275 16 18.93495283483053 26.932647294504658 26.500780228585892 27.631619642078924 17 18.585185497589023 30.711484121293914 30.264434228838937 20.438896152278126 18 17.817046940238708 27.440990820013216 30.185989625068533 24.555972614679543 19 20.303656530724137 26.231144475841027 27.115684703302268 26.349514290132568 20 22.415475236528756 27.380821840777138 33.91084306861794 16.292859854076166 21 21.61331590119916 33.526492626488405 27.637805238075153 17.222386234237273 22 19.569819914807475 24.323169274457708 32.15329031532481 23.953720495410007 23 23.172367255704103 27.934995009348683 29.897797084334975 18.994840650612232 24 21.214907286350922 27.43368057019949 27.985042104227293 23.3663700392223 25 17.597177118918083 36.27036677772623 25.80012090028538 20.332335203070304 26 17.885088496197266 27.756456215821068 31.276060337677308 23.082394950304362 27 25.256350779525675 28.104255408881958 26.192062755683015 20.447331055909356 28 16.956686769853654 30.58327358609928 31.12957417794835 21.330465466098715 29 20.983509763400953 27.121026808935373 28.48635654337649 23.40910688428718 30 20.52830613076912 33.80906189813448 27.209874460517625 18.452757510578774 31 23.836475334935965 28.26479974132962 23.39589220193159 24.502832721802818 32 25.105084841072355 30.883556155370922 23.353717683775464 20.657641319781256 33 23.33937834760238 28.6224396552936 22.75034091068843 25.287841086415586 34 23.73019554918252 29.43078458661943 24.599552950107544 22.239466914090507 35 25.604149972586566 27.995726315493513 24.062249588798448 22.337874123121477 36 23.535630438755568 35.53034456581334 22.641530653845614 18.29249434158548 37 22.99157915454149 27.383633475320877 27.83715012722646 21.787637242911167 38 19.57010107826185 33.098843012385245 23.517354814221246 23.813701095131652 39 25.382593170539693 26.417274682636748 25.45316519758762 22.74696694923594 40 21.262142746685786 31.388244555972616 26.6205558601493 20.729056837192303 41 25.189433877384616 27.72749638002053 23.918012736704483 23.165057005890375 42 19.761292227236304 28.717472902872082 29.291327513249826 22.229907356641785 43 25.988781578170467 26.02364584651287 24.690649909324787 23.296922665991872 44 23.15859024643977 25.69496576834943 27.61728030590584 23.529163679304965 45 20.409936316477584 25.77087990103046 26.519337016574585 27.29984676591737 46 26.060197095581515 29.34249926194593 24.448568175108598 20.148735467363952 47 18.928204911925548 27.0760406562355 34.12986939957544 19.865885032263506 48 22.215286857014323 27.801723531975313 26.691971377560346 23.291018233450018 49 21.071795088074452 24.439852108023 32.7288319064288 21.759520897473745 50 22.541717627542774 24.27537148721409 28.98007956925759 24.20283131598555 51 21.322874052830613 23.415011316829037 26.842112662196165 28.42000196814418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 198.0 1 458.0 2 718.0 3 2598.5 4 4479.0 5 3015.0 6 1551.0 7 1499.0 8 1447.0 9 1382.0 10 1317.0 11 1257.0 12 1197.0 13 1145.5 14 1094.0 15 1097.0 16 1100.0 17 993.0 18 886.0 19 989.0 20 1092.0 21 1539.0 22 1986.0 23 1681.0 24 1376.0 25 2116.5 26 3652.0 27 4447.0 28 5318.0 29 6189.0 30 7135.0 31 8081.0 32 8294.0 33 8507.0 34 9449.5 35 10392.0 36 10391.5 37 10391.0 38 11109.5 39 11828.0 40 13220.5 41 14613.0 42 15897.0 43 17181.0 44 18508.0 45 19835.0 46 38669.0 47 57503.0 48 44860.0 49 32217.0 50 30857.0 51 29497.0 52 25165.0 53 20833.0 54 19007.0 55 17181.0 56 15766.5 57 14352.0 58 13169.5 59 11987.0 60 11173.0 61 10359.0 62 9838.0 63 9317.0 64 7764.5 65 6212.0 66 5216.5 67 4221.0 68 3653.5 69 3086.0 70 2739.0 71 2392.0 72 1993.0 73 1594.0 74 1256.0 75 784.0 76 650.0 77 456.5 78 263.0 79 202.0 80 141.0 81 129.0 82 117.0 83 79.5 84 42.0 85 27.5 86 13.0 87 9.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 355665.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.69898327390219 #Duplication Level Percentage of deduplicated Percentage of total 1 73.5316113072693 21.102824830103987 2 10.32222506235978 5.924747288282346 3 3.4774469257817993 2.993975734766834 4 1.7048215576212715 1.9570658146864304 5 1.1021892012382541 1.5815854725506135 6 0.8153971546065217 1.4040641580984004 7 0.6984833765417628 1.4032033918329543 8 0.5146193557451635 1.1815241826365415 9 0.5036274849304976 1.3008237089668002 >10 7.10974117973287 41.91084217069088 >50 0.13290169738628022 2.6549880721482717 >100 0.06994826178225275 3.882396686189598 >500 0.006994826178225275 1.2064738409513693 >1k 0.006994826178225275 4.076831975983995 >5k 0.002997782647810832 7.4186526721109995 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC 9394 2.641249490391239 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCG 9047 2.5436857717233914 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTC 7428 2.088482139091561 No Hit GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 3270 0.9194044958036355 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2697 0.7582978364472186 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGACAGAGT 2315 0.650893396876274 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCT 1885 0.5299931114953679 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTA 1531 0.43046124864690083 No Hit GAACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCT 1311 0.36860528868457676 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTC 1207 0.3393642894296599 No Hit CTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGCT 711 0.19990721606005651 No Hit CCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 695 0.1954086007900693 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 639 0.17966344734511408 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 618 0.17375901480325587 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 522 0.14676732318333263 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 517 0.14536150591146163 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 505 0.14198754445897122 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCC 467 0.1313033331927516 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATG 448 0.1259612275596418 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 447 0.1256800641052676 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 433 0.12174377574402878 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGACAGAG 430 0.12090028538090619 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 377 0.10599862229907356 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20974793696315353 0.0 2 0.0 0.0 0.0 1.562425315957432 0.0 3 0.0 0.0 0.0 1.8652383563184458 0.0 4 0.0 0.0 0.0 2.6350638943950067 0.0 5 0.0 0.0 0.0 5.834704005173408 0.0 6 0.0 0.0 0.0 6.515400728213347 0.0 7 0.0 0.0 0.0 7.599285844825889 0.0 8 0.0 0.0 0.0 8.643245750917297 0.0 9 0.0 0.0 0.0 8.937061560738336 0.0 10 0.0 0.0 0.0 12.234546553638959 0.0 11 0.0 0.0 0.0 13.364823640223245 0.0 12 0.0 0.0 0.0 16.97327541366173 0.0 13 0.0 0.0 0.0 17.461937497364094 0.0 14 0.0 0.0 0.0 17.71217297175713 0.0 15 0.0 0.0 0.0 18.5146134705411 0.0 16 0.0 0.0 0.0 19.190530414856678 0.0 17 0.0 0.0 0.0 19.863354561174138 0.0 18 0.0 0.0 0.0 20.46448202662618 0.0 19 0.0 0.0 0.0 21.66139485189715 0.0 20 0.0 0.0 0.0 22.230188520096156 0.0 21 0.0 0.0 0.0 22.755964179775912 0.0 22 0.0 0.0 0.0 23.321102723068055 0.0 23 0.0 0.0 0.0 23.80386037422856 0.0 24 0.0 0.0 0.0 24.235446276692954 0.0 25 0.0 0.0 0.0 24.667032179157353 0.0 26 0.0 0.0 0.0 25.052507275104382 0.0 27 0.0 0.0 0.0 25.533296782084264 0.0 28 0.0 0.0 0.0 25.92186467602941 0.0 29 0.0 0.0 0.0 26.30818326233956 0.0 30 2.8116345437420045E-4 0.0 0.0 26.714745617364656 0.0 31 2.8116345437420045E-4 0.0 0.0 27.121870299298497 0.0 32 2.8116345437420045E-4 0.0 0.0 27.50622074142803 0.0 33 2.8116345437420045E-4 0.0 0.0 27.87257672247761 0.0 34 2.8116345437420045E-4 0.0 0.0 28.253553203154652 0.0 35 2.8116345437420045E-4 0.0 0.0 28.658990904362252 0.0 36 2.8116345437420045E-4 0.0 0.0 29.069489547748585 0.0 37 2.8116345437420045E-4 0.0 0.0 29.463118383872466 0.0 38 2.8116345437420045E-4 0.0 0.0 29.846906499093247 0.0 39 2.8116345437420045E-4 0.0 0.0 30.229569960496534 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 25 3.885354E-5 45.000004 5 GCGAACC 30 2.1612595E-6 45.000004 33 GGATACA 30 2.1612595E-6 45.000004 8 TCGATGG 25 3.885354E-5 45.000004 2 ACGATAG 30 2.1612595E-6 45.000004 1 CGGCGAA 40 6.7921064E-9 45.0 31 ATTACGG 20 7.026711E-4 45.0 2 CGCGCAG 20 7.026711E-4 45.0 41 TAACCGC 20 7.026711E-4 45.0 37 AAGCATG 20 7.026711E-4 45.0 3 CGAATAC 20 7.026711E-4 45.0 45 GACGCGT 20 7.026711E-4 45.0 45 CGATCGA 35 1.208773E-7 45.0 41 ACGACGA 20 7.026711E-4 45.0 38 GCATATC 55 1.8189894E-12 45.0 28 CGATGAA 950 0.0 43.81579 19 GATACCT 980 0.0 43.622448 5 GATGAAT 990 0.0 43.181816 20 TGATACC 985 0.0 43.172592 4 TACGGCT 1140 0.0 43.026318 7 >>END_MODULE