##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551783_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 833734 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16428261291971 31.0 31.0 33.0 28.0 34.0 2 31.07020224675976 31.0 31.0 34.0 28.0 34.0 3 30.950840435918412 31.0 30.0 34.0 27.0 34.0 4 34.872727992381265 35.0 35.0 37.0 32.0 37.0 5 34.55439864513142 35.0 35.0 37.0 32.0 37.0 6 34.77024206761389 35.0 35.0 37.0 32.0 37.0 7 35.296874062950536 36.0 35.0 37.0 33.0 37.0 8 34.77242022035805 37.0 35.0 37.0 32.0 37.0 9 36.63064238714026 39.0 37.0 39.0 32.0 39.0 10 36.24390273156666 37.0 35.0 39.0 32.0 39.0 11 36.55164476919497 38.0 35.0 39.0 32.0 39.0 12 36.650903045815575 39.0 35.0 39.0 32.0 39.0 13 36.620526450882416 39.0 35.0 39.0 32.0 39.0 14 37.50461058323158 39.0 36.0 41.0 32.0 41.0 15 37.51631575538481 39.0 36.0 41.0 32.0 41.0 16 37.776196004960816 39.0 36.0 41.0 33.0 41.0 17 37.493102116502385 39.0 36.0 41.0 32.0 41.0 18 37.50315808159437 39.0 36.0 40.0 33.0 41.0 19 37.45728733624873 39.0 36.0 40.0 32.0 41.0 20 37.239605197820886 39.0 35.0 40.0 32.0 41.0 21 37.271808514466244 39.0 35.0 40.0 32.0 41.0 22 37.42880702958018 39.0 35.0 41.0 32.0 41.0 23 37.4152091674323 39.0 35.0 41.0 32.0 41.0 24 37.31341890818894 39.0 35.0 41.0 32.0 41.0 25 37.06689663609736 39.0 35.0 40.0 32.0 41.0 26 37.10862457330516 39.0 35.0 40.0 32.0 41.0 27 37.11642802140731 39.0 35.0 40.0 32.0 41.0 28 36.94821729712354 39.0 35.0 41.0 31.0 41.0 29 37.08003152084478 39.0 35.0 41.0 31.0 41.0 30 36.65939616232515 39.0 35.0 40.0 30.0 41.0 31 36.70220837821176 39.0 35.0 40.0 30.0 41.0 32 36.5652390330729 39.0 35.0 40.0 30.0 41.0 33 36.38925604569323 39.0 35.0 41.0 30.0 41.0 34 36.33878431250255 39.0 35.0 41.0 30.0 41.0 35 36.212481438924165 39.0 35.0 41.0 30.0 41.0 36 36.13769739509244 39.0 35.0 41.0 29.0 41.0 37 36.2929195642735 39.0 35.0 41.0 30.0 41.0 38 35.94830605444902 39.0 35.0 40.0 28.0 41.0 39 35.981001134654456 39.0 35.0 40.0 29.0 41.0 40 35.85856760069758 39.0 35.0 40.0 28.0 41.0 41 35.79986062701053 39.0 35.0 40.0 27.0 41.0 42 35.973146111349664 39.0 35.0 40.0 29.0 41.0 43 35.97841157971247 39.0 35.0 40.0 29.0 41.0 44 36.0919585863117 39.0 35.0 40.0 30.0 41.0 45 36.13958888566377 39.0 35.0 40.0 30.0 41.0 46 36.02280583495455 39.0 35.0 40.0 30.0 41.0 47 35.78659500512154 38.0 35.0 40.0 29.0 41.0 48 35.80866079588934 38.0 35.0 40.0 29.0 41.0 49 35.94084804026224 39.0 35.0 40.0 29.0 41.0 50 35.834216908510385 39.0 35.0 40.0 29.0 41.0 51 34.930699719574825 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 21.0 10 29.0 11 33.0 12 24.0 13 26.0 14 34.0 15 47.0 16 84.0 17 117.0 18 285.0 19 510.0 20 1083.0 21 2305.0 22 4182.0 23 5876.0 24 7080.0 25 8493.0 26 9567.0 27 10078.0 28 10723.0 29 12379.0 30 15608.0 31 19725.0 32 27212.0 33 37901.0 34 59212.0 35 60179.0 36 71193.0 37 107307.0 38 182158.0 39 180230.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.00691827369401 18.191053741361156 19.69752942785109 14.10449855709375 2 29.048713378607566 32.96830883711112 21.562512743872748 16.420465040408573 3 27.950161562320837 32.02544216740591 25.62423986547268 14.40015640480057 4 25.951802373418857 21.127122079704076 35.949115665188174 16.971959881688882 5 31.321020853173792 25.617882921891155 24.318547642293588 18.742548582641465 6 23.710440020438174 37.05642327169097 25.36564419826947 13.867492509601384 7 69.19772973154508 5.030861161953333 20.8013587067338 4.970050399767792 8 67.72159945498204 13.284452835076896 12.957010269462444 6.036937440478618 9 62.43142297183514 7.016506463692257 13.82971067510741 16.722359889365194 10 40.05210294890217 24.699964257185144 20.979712954011713 14.268219839900976 11 30.31902261392722 21.776249979010093 29.262330671413185 18.6423967356495 12 24.87088207989599 19.47311732519005 31.9242108394284 23.731789755485565 13 25.48114866372248 20.260778617640636 36.425046837480544 17.83302588115634 14 19.621246104872778 27.950041619989108 30.755012989754526 21.673699285383588 15 16.947851473011777 23.76765251267191 38.7608038055303 20.523692208786017 16 20.474995622104892 26.233666852977088 27.823502460017224 25.467835064900797 17 20.86384866156352 27.581218949928875 31.164136283275003 20.390796105232603 18 20.54408240517959 25.045877941885543 31.604444583044472 22.805595069890398 19 19.99006877493301 26.821024451443748 28.714913869411586 24.473992904211656 20 22.7159981480904 27.75621481191843 33.6017242909609 15.926062749030267 21 21.08046451266231 30.957835472704726 31.20347736808143 16.758222646551538 22 19.858611979360326 21.920420661745833 34.31346208742836 23.907505271465478 23 20.935934002931393 27.46703385012486 32.39870270374004 19.198329443203708 24 22.007138967584385 25.224352131495177 29.052551533222825 23.71595736769761 25 19.239229778322585 32.79199360947256 26.941086725502377 21.027689886702476 26 18.74122921699247 24.103491041507244 32.6240743450549 24.531205396445387 27 22.561152597830965 26.36308462891042 28.17757222327505 22.898190549983568 28 16.031492058618216 26.768849537142543 33.6248731609842 23.574785243255043 29 20.461442138619752 23.132078096851032 33.57617657430308 22.83030319022614 30 19.446130300551495 27.469912466086306 30.911297847994685 22.172659385367517 31 20.65071113808481 22.611888204151445 31.114360215608333 25.62304044215541 32 22.770811793689592 25.804992959385125 30.399024149189067 21.02517109773621 33 20.60345385938441 25.058351944385137 26.69520494546222 27.64298925076823 34 19.1238452552013 22.22435453034181 33.194040305421154 25.457759909035737 35 18.360652198422997 24.164181861361058 27.870160027058986 29.60500591315696 36 18.32418972957802 25.97723014774496 30.300431552509554 25.39814857016746 37 17.2658185944198 23.697246363948214 32.75385194798341 26.283083093648575 38 18.16994389097722 26.589295866547364 28.58765505544934 26.65310518702608 39 20.423180534798867 23.35361158355063 30.491979456277424 25.731228425373082 40 19.184416132723385 24.542240090964267 29.48194508080515 26.7913986955072 41 17.735632707794093 24.16178301472652 26.354448781026086 31.748135496453305 42 18.75094454586235 21.57906478565106 32.60236478301233 27.06762588547426 43 20.898991764759504 22.56019305917715 28.420095618026853 28.120719558036495 44 20.617247227533003 21.97727332698439 30.729105446101514 26.6763739993811 45 19.03148965977158 20.594218299841437 29.87031835093687 30.503973689450113 46 23.888314498389175 24.345294782268688 28.17517337664051 23.59121734270163 47 16.1878968591901 23.752659721206044 36.57389527115363 23.485548148450224 48 19.67653951979888 24.565748787982738 28.623157985640503 27.13455370657788 49 19.82310904916916 20.600815128086417 34.995094358632365 24.580981464112057 50 19.966200250919357 21.793161847783583 30.565863932621195 27.674773968675858 51 19.05128014450652 20.729153423034205 28.70819709883488 31.511369333624394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 203.0 1 550.0 2 897.0 3 4824.0 4 8751.0 5 5870.5 6 2990.0 7 2909.5 8 2829.0 9 2760.5 10 2692.0 11 2678.5 12 2665.0 13 2579.5 14 2494.0 15 2409.0 16 2324.0 17 2272.5 18 2221.0 19 2411.5 20 2602.0 21 2849.0 22 3096.0 23 3575.0 24 4054.0 25 4799.0 26 6849.5 27 8155.0 28 9175.5 29 10196.0 30 11687.0 31 13178.0 32 15485.5 33 17793.0 34 19769.0 35 21745.0 36 24171.5 37 26598.0 38 28125.0 39 29652.0 40 31856.0 41 34060.0 42 37504.5 43 40949.0 44 44971.0 45 48993.0 46 92055.0 47 135117.0 48 108615.5 49 82114.0 50 80859.5 51 79605.0 52 66862.5 53 54120.0 54 48500.5 55 42881.0 56 39090.0 57 35299.0 58 31948.0 59 28597.0 60 26023.0 61 23449.0 62 21102.0 63 18755.0 64 16128.5 65 13502.0 66 10912.5 67 8323.0 68 7022.5 69 5722.0 70 4755.0 71 3788.0 72 3386.5 73 2985.0 74 2521.0 75 1642.5 76 1228.0 77 955.5 78 683.0 79 533.0 80 383.0 81 349.5 82 316.0 83 204.5 84 93.0 85 51.5 86 10.0 87 10.5 88 11.0 89 11.5 90 12.0 91 7.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 833734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.34150785884582 #Duplication Level Percentage of deduplicated Percentage of total 1 73.76802433722271 23.857691388338186 2 9.861820451551404 6.378922872727524 3 3.480659774902519 3.3770935639193507 4 1.8291999285411535 2.3663633545725573 5 1.2668552622125968 2.048600470943444 6 0.9423807797365147 1.8286809236324246 7 0.7432077829341822 1.6825522246764864 8 0.6711895692982858 1.7365826184188682 9 0.6012295799123094 1.7500204065334077 >10 6.7218446242678755 38.89474482652586 >50 0.06597845627655219 1.4774436229421655 >100 0.03898726871618471 2.4473721023363635 >500 0.0037487758380946755 0.946407739563937 >1k 0.0029990206704757407 2.920697213181558 >5k 7.497551676189352E-4 1.4441023041181211 >10k+ 0.0011246327514284028 6.842724367569695 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCG 19008 2.2798638414650236 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGC 18934 2.2709881089172326 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 18497 2.218573309952575 No Hit GCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 6793 0.8147682594208705 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5118 0.6138648537783035 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCT 4303 0.5161118534208752 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTTACCCT 4230 0.5073560632048111 No Hit GAACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCT 3914 0.4694542863791089 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTC 3264 0.3914917707566202 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTA 3214 0.3854946541702749 No Hit CCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 2177 0.2611144561694737 TruSeq Adapter, Index 19 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGCT 1866 0.22381239100240602 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCC 1122 0.1345752961975882 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTT 942 0.11298567648674518 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATG 922 0.11058682985220707 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCTTACCC 847 0.10159115497268914 No Hit CGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTG 844 0.10123132797750842 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1994233172690571E-4 0.0 0.0 0.23040921924738586 0.0 2 1.1994233172690571E-4 0.0 0.0 1.521228593292345 0.0 3 1.1994233172690571E-4 0.0 0.0 1.9007261308762746 0.0 4 1.1994233172690571E-4 0.0 0.0 2.832438163730878 0.0 5 1.1994233172690571E-4 0.0 0.0 6.3829710675107405 0.0 6 1.1994233172690571E-4 0.0 0.0 7.281818901472172 0.0 7 1.1994233172690571E-4 0.0 0.0 8.592548702583798 0.0 8 1.1994233172690571E-4 0.0 0.0 10.074076384074537 0.0 9 1.1994233172690571E-4 0.0 0.0 10.529497417641599 0.0 10 1.1994233172690571E-4 0.0 0.0 13.77657622215239 0.0 11 1.1994233172690571E-4 0.0 0.0 15.127126877397348 0.0 12 1.1994233172690571E-4 0.0 0.0 18.547642293585245 0.0 13 1.1994233172690571E-4 0.0 0.0 19.09661834589929 0.0 14 1.1994233172690571E-4 0.0 0.0 19.388078211995673 0.0 15 1.1994233172690571E-4 0.0 0.0 20.11912672387116 0.0 16 1.1994233172690571E-4 0.0 0.0 20.802198303055892 0.0 17 1.1994233172690571E-4 0.0 0.0 21.544401451781983 0.0 18 1.1994233172690571E-4 0.0 0.0 22.230831416255064 0.0 19 1.1994233172690571E-4 0.0 0.0 23.351092794584364 0.0 20 1.1994233172690571E-4 0.0 0.0 23.980190324491986 0.0 21 1.1994233172690571E-4 0.0 0.0 24.619003183269484 0.0 22 1.1994233172690571E-4 0.0 0.0 25.36912252588955 0.0 23 2.3988466345381142E-4 0.0 0.0 25.97974893671123 0.0 24 2.3988466345381142E-4 0.0 0.0 26.493461943497568 0.0 25 2.3988466345381142E-4 0.0 0.0 26.944804937785914 0.0 26 2.3988466345381142E-4 0.0 0.0 27.377316985993133 0.0 27 2.3988466345381142E-4 0.0 0.0 27.9116600738365 0.0 28 2.3988466345381142E-4 0.0 0.0 28.348609988317616 0.0 29 2.3988466345381142E-4 0.0 0.0 28.832817181499134 0.0 30 2.3988466345381142E-4 0.0 0.0 29.386830811745714 0.0 31 2.3988466345381142E-4 0.0 0.0 29.868879042956145 0.0 32 2.3988466345381142E-4 0.0 0.0 30.326578980826017 0.0 33 2.3988466345381142E-4 0.0 0.0 30.778521686773 0.0 34 2.3988466345381142E-4 0.0 0.0 31.22890514240753 0.0 35 2.3988466345381142E-4 0.0 0.0 31.697279947801096 0.0 36 2.3988466345381142E-4 0.0 0.0 32.1345896892774 0.0 37 2.3988466345381142E-4 0.0 0.0 32.60056564803642 0.0 38 2.3988466345381142E-4 0.0 0.0 33.10480321061634 0.0 39 2.3988466345381142E-4 0.0 0.0 33.86103961215448 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCACG 30 2.164781E-6 45.000004 16 GCGAACC 60 0.0 45.000004 33 ACCGCTA 30 2.164781E-6 45.000004 10 TAGCCGT 35 1.2113924E-7 45.000004 44 AATCGCG 30 2.164781E-6 45.000004 1 GAATCGT 20 7.0321705E-4 45.0 9 CATTAGT 20 7.0321705E-4 45.0 27 CGCTATT 55 1.8189894E-12 45.0 43 CGTTTTT 2945 0.0 42.93718 1 CGATGAA 1475 0.0 42.55932 19 CGATCCC 90 0.0 42.5 34 TACGGCT 2185 0.0 42.21968 7 TGATACC 2030 0.0 42.00739 4 TAATACG 75 0.0 42.0 4 GATACCT 2030 0.0 41.89655 5 ACGGCTG 2235 0.0 41.37584 8 CCGATGA 1515 0.0 41.28713 18 ACCACCG 1975 0.0 41.012657 14 CGACAGG 55 6.002665E-11 40.909092 2 CCACCGA 1880 0.0 40.81117 15 >>END_MODULE