##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551782_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 370925 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.114187504212442 31.0 31.0 33.0 28.0 34.0 2 31.028469367122735 31.0 31.0 34.0 28.0 34.0 3 30.92935229493833 31.0 30.0 34.0 27.0 34.0 4 34.78008761879086 35.0 35.0 37.0 32.0 37.0 5 34.55728786142751 35.0 35.0 37.0 32.0 37.0 6 34.745600862708095 35.0 35.0 37.0 32.0 37.0 7 35.21379524162567 36.0 35.0 37.0 32.0 37.0 8 34.6203787827728 36.0 35.0 37.0 31.0 37.0 9 36.37984498213925 39.0 35.0 39.0 32.0 39.0 10 36.169166273505425 37.0 35.0 39.0 32.0 39.0 11 36.521771247556785 38.0 35.0 39.0 32.0 39.0 12 36.61136078722114 39.0 35.0 39.0 32.0 39.0 13 36.63137022309092 39.0 35.0 39.0 32.0 39.0 14 37.55714227943654 39.0 36.0 41.0 32.0 41.0 15 37.628574509671765 39.0 36.0 41.0 32.0 41.0 16 37.783996764844645 39.0 36.0 41.0 33.0 41.0 17 37.51810743411741 39.0 36.0 41.0 32.0 41.0 18 37.52479072588798 39.0 36.0 40.0 33.0 41.0 19 37.42354384309497 39.0 36.0 40.0 32.0 41.0 20 37.2280487969266 39.0 35.0 40.0 32.0 41.0 21 37.180206241153876 39.0 35.0 40.0 32.0 41.0 22 37.28662667655186 39.0 35.0 40.0 32.0 41.0 23 37.31669474961245 39.0 35.0 41.0 32.0 41.0 24 37.22322302352227 39.0 35.0 41.0 32.0 41.0 25 36.93082429062479 39.0 35.0 40.0 32.0 41.0 26 37.014827795376426 39.0 35.0 40.0 32.0 41.0 27 37.02444968659432 39.0 35.0 40.0 32.0 41.0 28 36.87634697041181 39.0 35.0 41.0 31.0 41.0 29 36.95058839388017 39.0 35.0 41.0 31.0 41.0 30 36.5898092606322 39.0 35.0 40.0 30.0 41.0 31 36.63903754128193 39.0 35.0 40.0 31.0 41.0 32 36.44095976275528 39.0 35.0 40.0 30.0 41.0 33 36.34528813102379 39.0 35.0 41.0 30.0 41.0 34 36.20534339826111 39.0 35.0 41.0 30.0 41.0 35 36.100510884949784 39.0 35.0 41.0 29.0 41.0 36 35.96757565545595 39.0 35.0 41.0 29.0 41.0 37 36.012045561771245 39.0 35.0 41.0 29.0 41.0 38 35.82812967581047 39.0 35.0 40.0 28.0 41.0 39 35.745530767675405 39.0 35.0 40.0 28.0 41.0 40 35.71523892970277 39.0 35.0 40.0 27.0 41.0 41 35.50130349801173 38.0 35.0 40.0 26.0 41.0 42 35.57878816472333 39.0 35.0 40.0 27.0 41.0 43 35.58146795174227 39.0 35.0 40.0 27.0 41.0 44 35.69941093212913 39.0 35.0 40.0 27.0 41.0 45 35.702306396171736 39.0 35.0 40.0 27.0 41.0 46 35.56257194850711 38.0 35.0 40.0 27.0 41.0 47 35.36772123744692 38.0 35.0 40.0 26.0 41.0 48 35.41454741524567 38.0 35.0 40.0 27.0 41.0 49 35.42955044820381 38.0 35.0 40.0 27.0 41.0 50 35.35456493900384 38.0 35.0 40.0 27.0 41.0 51 34.49226932668329 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 26.0 10 26.0 11 24.0 12 23.0 13 14.0 14 27.0 15 33.0 16 54.0 17 99.0 18 180.0 19 341.0 20 606.0 21 1249.0 22 1891.0 23 2656.0 24 3271.0 25 4333.0 26 4921.0 27 5282.0 28 5430.0 29 5941.0 30 7134.0 31 8854.0 32 11707.0 33 16295.0 34 26260.0 35 28851.0 36 31635.0 37 47472.0 38 79689.0 39 76583.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.705533463638204 19.284221877738087 19.49747253487902 16.512772123744693 2 32.45669609759385 31.9040237244726 19.57268989687942 16.066590281054122 3 29.450158387814245 29.2493091595336 25.59331401226663 15.707218440385523 4 26.72804475298241 21.496259351620946 33.84619532250455 17.929500572892092 5 29.93138774684909 26.021702500505494 24.7958482172946 19.25106153535081 6 23.973040372042867 35.43789175709375 26.85637258205837 13.732695288805013 7 66.4449686594325 6.438228752443216 21.304306800566152 5.812495787558132 8 64.60524364763766 12.991844712542965 15.469973714362743 6.932937925456628 9 58.32553750758239 8.246950192087349 17.03848486890881 16.389027431421447 10 40.97674732088697 19.52551054795444 24.392262586776305 15.10547954438229 11 31.41713284356676 21.750758239536296 27.634697041180832 19.197411875716114 12 25.865067062074544 19.31064231313608 32.129136617914675 22.695154006874706 13 25.594122801105346 21.27761676888859 35.48183595066388 17.646424479342183 14 19.72312462088023 27.895396643526322 30.86877401091865 21.5127047246748 15 17.267641706544453 23.093347711801577 39.47967918042731 20.159331401226662 16 19.907528476107032 24.467210352497133 31.24863516883467 24.376626002561164 17 19.975466738559007 26.683022174293995 31.75601536698793 21.585495720159063 18 20.156096245871808 25.573903080137494 31.785940554020353 22.484060119970344 19 21.275999191211163 25.86884140998854 29.689559884073603 23.165599514726697 20 23.307676754060793 26.368672912313812 33.37574981465256 16.94790051897284 21 22.189930578958013 28.78964750286446 30.8946552537575 18.12576666442003 22 19.623643593718405 22.898160005391926 33.89957538585968 23.578621015029995 23 21.380332951405272 26.755543573498684 31.63065309698726 20.23347037810878 24 22.020624115387207 24.403855226797873 30.09934622902204 23.47617442879288 25 19.357821662061063 29.825975601536697 28.551324391723394 22.26487834467884 26 19.54141672844915 24.676956258003642 32.303835007076906 23.47779200647031 27 23.640897755610972 25.611376962997912 28.415447866819438 22.33227741457168 28 17.35337332344814 25.847812900181978 32.561838646626676 24.23697512974321 29 23.70640965154681 21.679045629170318 31.712071173417804 22.902473545865067 30 20.11808317045225 25.71382354923502 31.176383365909548 22.99170991440318 31 21.881242838848824 22.933477118015773 28.590955044820383 26.594324998315024 32 23.85576599042933 24.823347037810876 30.121183527667316 21.19970344409247 33 21.25227471860888 23.157242030059987 30.0489317247422 25.541551526588936 34 21.995282065107503 22.70998180225113 31.688616297095102 23.60611983554627 35 19.93610568174159 23.756284963267507 28.898833996090858 27.408775358900044 36 21.342859068544854 28.2709442609692 27.475635236233742 22.91056143425221 37 19.354316910426636 24.040169845656127 32.40870795983015 24.19680528408708 38 19.31441666105008 24.41760463705601 28.520860012131834 27.74711868976208 39 21.333962391319 24.32594190200175 33.85077845925726 20.489317247421983 40 20.091393138774684 21.71544112691245 33.76639482375143 24.426770910561434 41 18.24654579766799 26.410190739367795 29.58226056480421 25.761002898160008 42 19.571072319201996 23.669205364965965 30.91190941565006 25.847812900181978 43 22.253016108377704 25.98368942508593 27.69481701152524 24.06847745501112 44 20.69501920873492 22.52099481027162 30.98254364089776 25.801442340095708 45 20.44995619060457 21.10453595740379 29.453393543169103 28.992114308822536 46 23.851991642515333 24.9360382826717 28.965424277144976 22.24654579766799 47 17.261171395834737 23.95362943991373 35.679719619869246 23.105479544382288 48 20.02399406888185 23.727168565073804 30.424748938464653 25.8240884275797 49 19.82907595875177 20.80204893172474 35.4769832176316 23.89189189189189 50 19.605580642987128 21.663678641234753 32.87942306396172 25.8513176518164 51 19.52011862236301 21.31994338478129 30.00525712745164 29.15468086540406 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 168.0 1 446.0 2 724.0 3 3165.0 4 5606.0 5 3752.5 6 1899.0 7 1849.0 8 1799.0 9 1768.5 10 1738.0 11 1687.0 12 1636.0 13 1667.5 14 1699.0 15 1603.0 16 1507.0 17 1462.5 18 1418.0 19 1334.5 20 1251.0 21 1429.5 22 1608.0 23 1821.5 24 2035.0 25 2368.0 26 2964.5 27 3228.0 28 4021.0 29 4814.0 30 5288.0 31 5762.0 32 6174.5 33 6587.0 34 7351.5 35 8116.0 36 8802.0 37 9488.0 38 10641.5 39 11795.0 40 13207.0 41 14619.0 42 16201.0 43 17783.0 44 19609.5 45 21436.0 46 36174.5 47 50913.0 48 43373.5 49 35834.0 50 35815.5 51 35797.0 52 31063.5 53 26330.0 54 23863.5 55 21397.0 56 19407.0 57 17417.0 58 15787.0 59 14157.0 60 13047.5 61 11938.0 62 10538.5 63 9139.0 64 7710.0 65 6281.0 66 5050.0 67 3819.0 68 3310.0 69 2801.0 70 2436.5 71 2072.0 72 1736.5 73 1401.0 74 1243.5 75 799.0 76 512.0 77 423.5 78 335.0 79 255.5 80 176.0 81 123.0 82 70.0 83 39.5 84 9.0 85 15.5 86 22.0 87 11.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 370925.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.77792616989149 #Duplication Level Percentage of deduplicated Percentage of total 1 75.43940679762395 26.236261199081756 2 9.54223800533092 6.637184976898627 3 3.246139466733305 3.386819961336654 4 1.6288877651706124 2.2659735374457237 5 1.096100914703395 1.9060058343152597 6 0.8250509318764963 1.721613623712057 7 0.7152368069709945 1.7412117006778323 8 0.6398381889695899 1.7801796237329182 9 0.5613940122257106 1.7571707558464427 >10 6.188460293172863 39.48441996164861 >50 0.06677633298747349 1.5921547283533806 >100 0.040376387387774666 2.343945563451042 >500 0.001552937976452872 0.36293350659887097 >1k 0.006211751905811488 3.578297541623244 >5k 0.002329406964679308 5.205827485277556 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGC 6531 1.7607333018804339 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCG 6433 1.7343128664824423 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTC 6314 1.7022309092134529 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3156 0.8508458583271551 No Hit GCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC 2206 0.5947293927343803 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCT 1515 0.408438363550583 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTTTCAT 1495 0.4030464379591561 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCT 1337 0.3604502257868842 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTC 1235 0.33295140527060724 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTA 1198 0.3229763429264676 No Hit CCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC 1109 0.2989822740446182 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCC 781 0.21055469434521804 No Hit CTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGCT 563 0.1517827053986655 No Hit TCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC 442 0.11916155557053312 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16067938262451978 0.0 2 0.0 0.0 0.0 1.3045763968457236 0.0 3 0.0 0.0 0.0 1.6987261575790253 0.0 4 0.0 0.0 0.0 2.6153535081215877 0.0 5 0.0 0.0 0.0 5.780144234009571 0.0 6 0.0 0.0 0.0 6.631529284895868 0.0 7 0.0 0.0 0.0 7.827458381074341 0.0 8 0.0 0.0 0.0 9.16735189054391 0.0 9 0.0 0.0 0.0 9.562310440115926 0.0 10 0.0 0.0 0.0 12.173620004043944 0.0 11 0.0 0.0 0.0 13.678776032890745 0.0 12 0.0 0.0 0.0 16.65107501516479 0.0 13 0.0 0.0 0.0 17.208869717597896 0.0 14 0.0 0.0 0.0 17.48709307811552 0.0 15 0.0 0.0 0.0 18.20394958549572 0.0 16 0.0 0.0 0.0 18.949922491069625 0.0 17 0.0 0.0 0.0 19.777852665633215 0.0 18 0.0 0.0 0.0 20.540810136820113 0.0 19 0.0 0.0 0.0 21.568241558266497 0.0 20 0.0 0.0 0.0 22.180764305452584 0.0 21 0.0 0.0 0.0 22.82294264339152 0.0 22 0.0 0.0 0.0 23.571341915481565 0.0 23 0.0 0.0 0.0 24.174159196603085 0.0 24 0.0 0.0 0.0 24.690705668261778 0.0 25 0.0 0.0 0.0 25.133921951877063 0.0 26 0.0 0.0 0.0 25.567971961986924 0.0 27 0.0 0.0 0.0 26.069690638269194 0.0 28 2.695962795713419E-4 0.0 0.0 26.50697580373391 0.0 29 2.695962795713419E-4 0.0 0.0 26.94318258408034 0.0 30 2.695962795713419E-4 0.0 0.0 27.4195592100829 0.0 31 2.695962795713419E-4 0.0 0.0 27.894318258408035 0.0 32 2.695962795713419E-4 0.0 0.0 28.31758441733504 0.0 33 2.695962795713419E-4 0.0 0.0 28.75406079396104 0.0 34 2.695962795713419E-4 0.0 0.0 29.21560962458718 0.0 35 2.695962795713419E-4 0.0 0.0 29.664487430073464 0.0 36 2.695962795713419E-4 0.0 0.0 30.138707285839455 0.0 37 2.695962795713419E-4 0.0 0.0 30.576262047583743 0.0 38 2.695962795713419E-4 0.0 0.0 31.016782368403316 0.0 39 2.695962795713419E-4 0.0 0.0 31.549504616836288 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.1615124E-6 45.000004 4 CTAGACG 25 3.88568E-5 45.0 16 ATAGGCG 20 7.027102E-4 45.0 1 TAGGTCG 20 7.027102E-4 45.0 1 AGGCGAT 20 7.027102E-4 45.0 1 GACCCCG 20 7.027102E-4 45.0 9 TGCGCAT 20 7.027102E-4 45.0 20 TATTAGC 20 7.027102E-4 45.0 18 CAGTGCG 20 7.027102E-4 45.0 1 GCTACGA 20 7.027102E-4 45.0 10 CGCAATG 20 7.027102E-4 45.0 41 ACGGTAT 25 3.88568E-5 45.0 16 TACGGCT 735 0.0 44.081635 7 ACGGCTG 765 0.0 42.352943 8 CCGATGA 655 0.0 42.251907 18 GATGAAT 720 0.0 42.1875 20 CGTTTTT 1810 0.0 42.140884 1 TTGTAGG 75 0.0 42.0 2 TGATACC 835 0.0 41.766468 4 GATACCT 850 0.0 41.558823 5 >>END_MODULE