##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551781_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 240589 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.157359646534132 31.0 31.0 33.0 28.0 34.0 2 31.05885971511582 31.0 31.0 34.0 28.0 34.0 3 30.965397420497197 31.0 31.0 34.0 28.0 34.0 4 34.82657145588535 35.0 35.0 37.0 32.0 37.0 5 34.56926958422871 35.0 35.0 37.0 32.0 37.0 6 34.77707625868182 35.0 35.0 37.0 32.0 37.0 7 35.229648903316445 36.0 35.0 37.0 33.0 37.0 8 34.44515335281331 36.0 35.0 37.0 30.0 37.0 9 36.35154142541845 39.0 35.0 39.0 32.0 39.0 10 36.233385566256146 37.0 35.0 39.0 32.0 39.0 11 36.606145750636976 38.0 35.0 39.0 32.0 39.0 12 36.668575870052244 39.0 35.0 39.0 33.0 39.0 13 36.61439633565957 39.0 35.0 39.0 32.0 39.0 14 37.57949449060431 39.0 36.0 41.0 32.0 41.0 15 37.58838517139188 39.0 36.0 41.0 32.0 41.0 16 37.82012893357552 39.0 36.0 41.0 33.0 41.0 17 37.51701449359697 39.0 36.0 41.0 32.0 41.0 18 37.54851219299303 39.0 36.0 40.0 33.0 41.0 19 37.452231814422106 39.0 36.0 40.0 32.0 41.0 20 37.22141078769187 39.0 35.0 40.0 32.0 41.0 21 37.23781635901891 39.0 35.0 40.0 32.0 41.0 22 37.380628374530836 39.0 35.0 41.0 33.0 41.0 23 37.39826010332975 39.0 35.0 41.0 33.0 41.0 24 37.28826338693789 39.0 35.0 41.0 32.0 41.0 25 37.01309286791998 39.0 35.0 40.0 32.0 41.0 26 37.079995344758075 39.0 35.0 40.0 32.0 41.0 27 37.057500550731746 39.0 35.0 40.0 32.0 41.0 28 36.88245098487462 39.0 35.0 41.0 31.0 41.0 29 36.930483106043916 39.0 35.0 41.0 31.0 41.0 30 36.651517733562216 39.0 35.0 40.0 31.0 41.0 31 36.613573355390315 39.0 35.0 40.0 31.0 41.0 32 36.426241432484446 39.0 35.0 40.0 30.0 41.0 33 36.31949507250955 39.0 35.0 41.0 30.0 41.0 34 36.09766448175104 39.0 35.0 41.0 29.0 41.0 35 36.02658060011056 39.0 35.0 41.0 29.0 41.0 36 36.0451516902269 39.0 35.0 40.0 29.0 41.0 37 36.008017822926234 39.0 35.0 41.0 29.0 41.0 38 35.822892983469735 39.0 35.0 40.0 28.0 41.0 39 35.848064541604145 39.0 35.0 40.0 28.0 41.0 40 35.86062122540931 39.0 35.0 40.0 28.0 41.0 41 35.48069945009955 38.0 35.0 40.0 26.0 41.0 42 35.68591664623071 39.0 35.0 40.0 27.0 41.0 43 35.72987543071379 39.0 35.0 40.0 28.0 41.0 44 35.851950837320075 39.0 35.0 40.0 28.0 41.0 45 35.873955168357654 39.0 35.0 40.0 28.0 41.0 46 35.743454605156515 39.0 35.0 40.0 28.0 41.0 47 35.526723998187784 38.0 35.0 40.0 27.0 41.0 48 35.573866635631724 38.0 35.0 40.0 27.0 41.0 49 35.67783231984837 38.0 35.0 40.0 28.0 41.0 50 35.57845121763672 38.0 35.0 40.0 28.0 41.0 51 34.76562103836834 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 12.0 10 16.0 11 21.0 12 8.0 13 12.0 14 14.0 15 19.0 16 24.0 17 54.0 18 76.0 19 195.0 20 395.0 21 757.0 22 1227.0 23 1713.0 24 1987.0 25 2697.0 26 3133.0 27 3291.0 28 3325.0 29 3643.0 30 4430.0 31 5625.0 32 7428.0 33 10411.0 34 17583.0 35 19849.0 36 20251.0 37 30684.0 38 51256.0 39 50441.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.76652299149172 18.161678214714723 19.06030616528603 15.01149262850754 2 29.841347692537894 34.33033097938809 19.45974254849557 16.368578779578453 3 28.09313809027013 32.04510596910083 25.409307989974607 14.452447950654435 4 26.281334558105318 21.495995245002888 35.59763746472199 16.6250327321698 5 31.945766431549238 25.84407433423806 23.97075510517937 18.239404129033332 6 23.346038264426056 38.57242018546152 25.028991350394243 13.05255019971819 7 64.84585745815478 6.483671323294082 23.286600800535354 5.383870418015786 8 61.70232221755775 16.238065746979288 14.974915727651721 7.084696307811246 9 56.00214473645927 9.466351329445652 16.141635735632136 18.38986819846294 10 40.04879691091446 21.227071894392513 23.345206971224787 15.378924223468237 11 33.49072484610684 22.350980302507594 26.28756925711483 17.870725594270727 12 27.439741634073044 19.8845333743438 29.633940038821393 23.041784952761766 13 25.430505966606955 23.14444966311843 34.21020911180478 17.214835258469837 14 18.916492441466566 30.582861228069447 28.248174272306713 22.25247205815727 15 16.680729376654792 24.925495346836307 38.3467240813171 20.047051195191802 16 18.453877774960617 25.729771519063632 29.613989001990948 26.202361703984806 17 18.488376442813262 28.77479851531034 31.672270968331883 21.06455407354451 18 17.89441745050688 26.933484074500498 31.712173041992774 23.459925432999846 19 20.664702043734334 26.45258095756664 28.454334986221312 24.428382012477712 20 23.08334961282519 27.24979113758318 33.634538569926306 16.03232067966532 21 21.234969179804565 32.239628578197674 29.262767624454984 17.26263461754278 22 18.578987401751533 24.294128160472837 32.3406307021518 24.786253735623824 23 21.648121900835037 28.369958726292555 30.623594594931607 19.3583247779408 24 22.103254928529566 25.23473641770821 29.15428386168944 23.507724792072786 25 18.25810822606187 32.5588451674848 26.984192959777882 22.198853646675452 26 17.553587237986772 27.258104069595866 31.471098013624893 23.717210678792462 27 22.311078228846707 29.825553121713792 26.969229682155042 20.894138967284455 28 17.096791623889704 29.46560316556451 31.926646687920062 21.51095852262572 29 20.379152829098587 27.28969321124407 28.82716998699026 23.50398397266708 30 18.48338868360565 32.927939348848035 27.69785817306693 20.89081379447938 31 24.586327720718735 26.571040238747408 24.294543807073474 24.548088233460383 32 23.965767345971763 30.280686149408325 23.255842952088415 22.497703552531494 33 21.391667948243686 26.62756817643367 24.6295549671847 27.35120890813795 34 20.923234229328855 30.66391231519313 25.417205275386657 22.99564818009136 35 19.907809583979315 28.573209914002717 24.321560836114703 27.19741966590326 36 21.175947362514496 35.590571472511215 22.848509283466825 20.384971881507465 37 18.60974525019847 31.579997422991074 27.35952184015063 22.450735486659823 38 22.281567320201674 26.954682051132846 22.609096841501483 28.154653787164 39 21.56623952051008 29.28396560108733 24.893490558587466 24.25630431981512 40 20.50966586169775 25.07970023567162 26.977126967567095 27.433506935063534 41 17.991263108454667 32.59500642173998 24.12828516681976 25.285445302985586 42 18.48712950301136 26.137520834285855 29.505920885826036 25.869428776876745 43 21.712547123933344 28.759835237687508 25.093832220093187 24.433785418285954 44 20.855068186824834 25.011534193167602 28.872475466459395 25.260922153548165 45 19.540793635619252 24.19229474331744 27.070647452709807 29.196264168353498 46 24.040583734085928 29.042059279518185 24.559726338278143 22.357630648117745 47 17.14791615576772 25.68321909979259 34.42011064512509 22.7487540993146 48 19.969740927473826 27.054021588684435 27.202407425110874 25.773830058730862 49 18.968863913146485 23.038459779956693 33.94793610680455 24.044740200092274 50 20.799787188940474 24.63412707979168 29.025017768892177 25.541067962375667 51 18.923974080277983 23.79576788631234 26.200699117582264 31.079558915827405 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 78.0 1 251.0 2 424.0 3 2182.0 4 3940.0 5 2656.5 6 1373.0 7 1294.5 8 1216.0 9 1137.5 10 1059.0 11 1040.5 12 1022.0 13 1011.5 14 1001.0 15 908.0 16 815.0 17 810.5 18 806.0 19 815.5 20 825.0 21 980.5 22 1136.0 23 1112.0 24 1088.0 25 1445.5 26 2067.0 27 2331.0 28 3107.5 29 3884.0 30 4156.0 31 4428.0 32 4760.5 33 5093.0 34 5496.0 35 5899.0 36 5936.0 37 5973.0 38 6614.5 39 7256.0 40 8233.0 41 9210.0 42 10344.5 43 11479.0 44 12991.5 45 14504.0 46 26494.0 47 38484.0 48 30755.0 49 23026.0 50 23076.5 51 23127.0 52 19105.0 53 15083.0 54 13470.0 55 11857.0 56 10434.5 57 9012.0 58 8413.0 59 7814.0 60 7497.5 61 7181.0 62 6786.5 63 6392.0 64 5363.0 65 4334.0 66 3483.0 67 2632.0 68 2389.5 69 2147.0 70 1684.5 71 1222.0 72 900.0 73 578.0 74 533.5 75 356.5 76 224.0 77 167.5 78 111.0 79 116.0 80 121.0 81 73.0 82 25.0 83 28.5 84 32.0 85 36.5 86 41.0 87 27.0 88 13.0 89 7.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 240589.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.71558965704999 #Duplication Level Percentage of deduplicated Percentage of total 1 75.50544898663642 25.457107349047547 2 9.41491197790818 6.348586178087942 3 3.3162384732974997 3.354268067118613 4 1.6445584101780166 2.2178902609845004 5 1.124315794664431 1.895348498892302 6 0.8900833374426746 1.8005810739476866 7 0.750776665516051 1.7719014585039217 8 0.6250308200601608 1.6858626121726263 9 0.5621578973322156 1.7058136490030715 >10 6.016075743379852 37.00169168166458 >50 0.0875289708565511 1.998013209248968 >100 0.04807929385078159 3.0175943206048492 >500 0.00493120962572119 1.3358881744385653 >1k 0.007396814438581784 5.52519026223144 >5k 0.002465604812860595 4.8842632040533855 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGC 6317 2.625639576206726 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCG 5434 2.2586236278466596 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTC 4874 2.0258615314914645 No Hit GCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 2361 0.9813416240975272 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2333 0.9697035192797675 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGCCACAT 1494 0.6209760213476094 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCT 1217 0.5058419129719147 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGCCACATCGTA 1014 0.4214656530431566 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTC 890 0.36992547456450625 No Hit GAACTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCT 876 0.3641064221556264 No Hit CCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 789 0.32794516790044437 No Hit CTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGCT 659 0.2739111098179884 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCC 451 0.18745661688605877 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 321 0.13342255880360282 No Hit TCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 320 0.13300691220296856 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAAGCCACA 306 0.12718785979408867 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATG 295 0.12261574718711163 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 292 0.12136880738520879 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 265 0.11014634916808332 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 262 0.10889940936618049 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTAT 253 0.105158589960472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.288458740840188 0.0 2 0.0 0.0 0.0 1.8899450930840562 0.0 3 0.0 0.0 0.0 2.303097814114527 0.0 4 0.0 0.0 0.0 3.1959067122769538 0.0 5 0.0 0.0 0.0 6.573035342430452 0.0 6 0.0 0.0 0.0 7.348216252613378 0.0 7 0.0 0.0 0.0 8.538628116829946 0.0 8 0.0 0.0 0.0 9.869944178661536 0.0 9 0.0 0.0 0.0 10.249429525040629 0.0 10 0.0 0.0 0.0 13.417487915075087 0.0 11 0.0 0.0 0.0 14.816138726209427 0.0 12 0.0 0.0 0.0 18.573583995943288 0.0 13 0.0 0.0 0.0 19.15881440963635 0.0 14 0.0 0.0 0.0 19.47761535232284 0.0 15 0.0 0.0 0.0 20.315143252600908 0.0 16 0.0 0.0 0.0 21.120666364630136 0.0 17 0.0 0.0 0.0 21.87714317778452 0.0 18 0.0 0.0 0.0 22.626138352127487 0.0 19 0.0 0.0 0.0 23.84813935799226 0.0 20 0.0 0.0 0.0 24.50402969379315 0.0 21 0.0 0.0 0.0 25.12874653454647 0.0 22 0.0 0.0 0.0 25.81497907219366 0.0 23 0.0 0.0 0.0 26.409353711100675 0.0 24 0.0 0.0 0.0 26.886931655229457 0.0 25 0.0 0.0 0.0 27.330842224706867 0.0 26 0.0 0.0 0.0 27.75604869715573 0.0 27 0.0 0.0 0.0 28.211597371450896 0.0 28 0.0 0.0 0.0 28.64636371571435 0.0 29 0.0 0.0 0.0 29.063672902751165 0.0 30 0.0 0.0 0.0 29.49178890140447 0.0 31 0.0 0.0 0.0 29.953987921309785 0.0 32 0.0 0.0 0.0 30.383766506365628 0.0 33 0.0 0.0 0.0 30.792347114789123 0.0 34 0.0 0.0 0.0 31.2237882862475 0.0 35 0.0 0.0 0.0 31.652735578102074 0.0 36 0.0 0.0 0.0 32.093736621375044 0.0 37 0.0 0.0 0.0 32.52102132682708 0.0 38 0.0 0.0 0.0 32.9420713332696 0.0 39 0.0 0.0 0.0 33.38847578235082 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTCC 25 3.8815815E-5 45.000004 37 CGACAGG 25 3.8815815E-5 45.000004 2 ATCACCC 25 3.8815815E-5 45.000004 36 TAGCACG 25 3.8815815E-5 45.000004 1 TCGTCCC 25 3.8815815E-5 45.000004 38 AACTGCA 25 3.8815815E-5 45.000004 17 CACCGAG 50 2.1827873E-11 45.000004 16 GCACTAG 25 3.8815815E-5 45.000004 1 CTTCGGG 20 7.022156E-4 45.0 25 GATACGC 20 7.022156E-4 45.0 27 ACACGCG 35 1.206572E-7 45.0 36 CACGGTT 20 7.022156E-4 45.0 7 CGGTTTA 20 7.022156E-4 45.0 9 TCGGGTA 20 7.022156E-4 45.0 27 CGCCTAA 20 7.022156E-4 45.0 28 GTGCTCA 20 7.022156E-4 45.0 8 AGGCACG 20 7.022156E-4 45.0 1 TTGCACT 20 7.022156E-4 45.0 34 CGGGTGA 30 2.1583237E-6 44.999996 6 GATCACC 30 2.1583237E-6 44.999996 35 >>END_MODULE