##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551771_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 555873 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23927407879138 31.0 31.0 33.0 28.0 34.0 2 31.153004373301094 31.0 31.0 34.0 28.0 34.0 3 30.99894220442439 31.0 31.0 34.0 27.0 34.0 4 34.813045425843676 35.0 35.0 37.0 32.0 37.0 5 34.58115612738881 35.0 35.0 37.0 32.0 37.0 6 34.80242429475798 36.0 35.0 37.0 32.0 37.0 7 35.40801765870982 37.0 35.0 37.0 33.0 37.0 8 34.992793317898155 37.0 35.0 37.0 32.0 37.0 9 36.92775687971893 39.0 37.0 39.0 32.0 39.0 10 36.407895328609236 37.0 35.0 39.0 32.0 39.0 11 36.681889568300676 38.0 35.0 39.0 32.0 39.0 12 36.838258019367736 39.0 37.0 39.0 33.0 39.0 13 36.91139342979422 39.0 37.0 39.0 33.0 39.0 14 37.89682355502066 40.0 37.0 41.0 33.0 41.0 15 37.97621399132536 40.0 37.0 41.0 33.0 41.0 16 38.04910114360654 40.0 37.0 41.0 33.0 41.0 17 37.854155535527 39.0 37.0 41.0 33.0 41.0 18 37.85348092100174 39.0 37.0 41.0 33.0 41.0 19 37.778505162150346 39.0 37.0 41.0 33.0 41.0 20 37.75916981037035 39.0 36.0 41.0 33.0 41.0 21 37.63727865897426 39.0 36.0 41.0 33.0 41.0 22 37.816929406537106 39.0 36.0 41.0 33.0 41.0 23 37.85563249159431 40.0 36.0 41.0 33.0 41.0 24 37.74891746855847 40.0 36.0 41.0 33.0 41.0 25 37.35543550415293 39.0 36.0 41.0 32.0 41.0 26 37.525906097256026 39.0 36.0 41.0 33.0 41.0 27 37.60204759000707 39.0 36.0 41.0 33.0 41.0 28 37.471282109402686 39.0 36.0 41.0 33.0 41.0 29 37.55224124935012 40.0 36.0 41.0 33.0 41.0 30 37.16963047314764 39.0 35.0 41.0 32.0 41.0 31 37.184945122357085 39.0 35.0 41.0 32.0 41.0 32 37.18559635024547 39.0 36.0 41.0 32.0 41.0 33 37.09959649056529 39.0 36.0 41.0 31.0 41.0 34 37.032876214531015 40.0 36.0 41.0 31.0 41.0 35 37.03424523227428 40.0 36.0 41.0 31.0 41.0 36 36.85040647773862 39.0 35.0 41.0 31.0 41.0 37 36.87674342880478 40.0 35.0 41.0 31.0 41.0 38 36.565674173777104 39.0 35.0 41.0 30.0 41.0 39 36.61917560306041 39.0 35.0 41.0 31.0 41.0 40 36.52651774775893 39.0 35.0 41.0 30.0 41.0 41 36.350446954610135 39.0 35.0 41.0 30.0 41.0 42 36.4807339086446 39.0 35.0 41.0 30.0 41.0 43 36.46536349130107 39.0 35.0 41.0 31.0 41.0 44 36.53329627450874 39.0 35.0 41.0 31.0 41.0 45 36.530952213904975 39.0 35.0 41.0 31.0 41.0 46 36.398983220987525 39.0 35.0 41.0 30.0 41.0 47 36.247275906546996 39.0 35.0 41.0 30.0 41.0 48 36.25140094949746 39.0 35.0 41.0 30.0 41.0 49 36.25952510735366 39.0 35.0 41.0 30.0 41.0 50 36.17155897120385 39.0 35.0 40.0 30.0 41.0 51 35.25158444464833 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 24.0 10 27.0 11 20.0 12 21.0 13 19.0 14 25.0 15 36.0 16 53.0 17 97.0 18 149.0 19 359.0 20 682.0 21 1263.0 22 1832.0 23 2388.0 24 3097.0 25 4165.0 26 5340.0 27 6103.0 28 6399.0 29 7304.0 30 8873.0 31 11399.0 32 15170.0 33 21423.0 34 34585.0 35 40009.0 36 47717.0 37 73372.0 38 127873.0 39 136013.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.37689724091654 21.681031458624542 23.948275955119243 12.993795345339674 2 31.65723105817336 28.27570326315543 24.259318225565913 15.807747453105295 3 30.483221887013762 27.164298319939988 27.419752353505206 14.932727439541047 4 27.55521495017747 23.734917867930264 31.041083125102315 17.66878405678995 5 28.175320621796708 29.43046343319427 24.55291046695918 17.841305478049843 6 25.26476371401381 35.619826830948796 25.09188249834045 14.023526956696944 7 74.19374569371061 6.124240608916065 14.889372212717653 4.792641484655668 8 74.69314033960994 9.265965427354809 10.712518866719556 5.328375366315687 9 68.1036855540744 8.150782642797905 12.64047723131003 11.105054571817663 10 38.727191282900954 28.052270932389234 19.5776733174664 13.642864467243419 11 27.705429117802087 24.586011552998617 28.898327495668973 18.810231833530324 12 24.587090936239033 21.845637402788046 31.564404099497544 22.002867561475373 13 24.109463852354764 23.18605149017851 33.92393586304785 18.78054879441887 14 19.807042256054892 27.717482230653406 29.92769931261277 22.547776200678932 15 17.837527636708383 26.111180071707025 35.34440420743587 20.706888084148716 16 19.9806430605552 26.67767637571891 29.513216148292866 23.82846441543302 17 20.436862376837876 27.52157417251782 30.288393212118596 21.75317023852571 18 19.89267332646126 26.099846547682652 31.60362169056601 22.403858435290076 19 20.60272760144853 26.847859133291234 29.45582893934406 23.093584325916172 20 22.362302180534044 27.340237788127865 32.43168853317214 17.865771498165948 21 22.11746208216625 28.67813331462402 30.533952899313334 18.670451703896394 22 21.031602542307326 23.383578623174717 31.316865543028715 24.267953291489246 23 21.329512316662257 26.454603839366186 31.061411509463493 21.15447233450806 24 21.51030900943201 25.156105801145223 30.619583969719706 22.71400121970306 25 19.400114774417897 30.37060623559698 28.079075616192906 22.150203373792216 26 20.22836151423077 26.99555474002155 30.240900349540272 22.535183396207405 27 23.209258229847464 27.673227517796334 28.42825609446762 20.68925815788858 28 18.622778944111335 28.239543924601485 31.576457212348863 21.561219918938317 29 23.839797939457394 23.95115431042702 29.497744988513563 22.71130276160202 30 22.670825890086405 28.665720407359235 28.676334342556665 19.987119359997696 31 22.781642569435824 27.628073318905578 26.5015570103243 23.088727101334296 32 25.008769988828384 28.00747652791195 25.864541001271874 21.11921248198779 33 22.05233929332779 28.481865462074968 26.291077278443097 23.17471796615414 34 22.07626562182369 26.62982371872712 29.00482664205673 22.28908401739246 35 23.926508393104182 25.07461236649379 26.857033890834774 24.141845349567255 36 22.517013778327062 30.72176558314579 26.43877288517341 20.322447753353735 37 23.117690551618804 26.780757475178685 30.20096316964486 19.900588803557646 38 20.788021724386684 29.421468572857467 26.21048332982534 23.580026372930508 39 23.19990357509719 26.788133260654863 28.879798083375157 21.132165080872788 40 21.820451793844995 26.173964196857913 29.23923270243383 22.766351306863257 41 19.536117062710368 27.819124152459285 28.702419437533393 23.942339347296954 42 21.31350146526275 25.92822461245644 29.22250226220737 23.535771660073436 43 23.5445866232035 27.140012197030615 26.84947820815186 22.46592297161402 44 22.135991494460068 25.720083544262806 28.46171697492053 23.682207986356595 45 21.040597402644128 25.364426766545595 27.891083035153713 25.703892795656564 46 24.685854502737136 26.977385122141207 27.034412536676545 21.30234783844511 47 19.444909178895177 26.34810469297843 32.74596895334006 21.461017174786328 48 20.925463190333044 25.916531294018597 29.045483410779084 24.112522104869278 49 21.036459766889198 24.140945863533577 31.83982672301047 22.982767646566753 50 21.15177387640702 24.059632326088874 30.423855808790854 24.36473798871325 51 20.797196481930225 23.43376994385408 27.79753648765096 27.97149708656474 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 179.0 1 353.0 2 527.0 3 3068.5 4 5610.0 5 3835.0 6 2060.0 7 1974.5 8 1889.0 9 1864.0 10 1839.0 11 1790.5 12 1742.0 13 1747.0 14 1752.0 15 1687.5 16 1623.0 17 1521.5 18 1420.0 19 1562.0 20 1704.0 21 2574.5 22 3445.0 23 3123.0 24 2801.0 25 3562.0 26 5061.5 27 5800.0 28 7008.5 29 8217.0 30 10082.0 31 11947.0 32 12631.0 33 13315.0 34 15046.5 35 16778.0 36 18063.0 37 19348.0 38 20677.5 39 22007.0 40 24392.0 41 26777.0 42 28474.0 43 30171.0 44 32780.5 45 35390.0 46 50734.5 47 66079.0 48 60293.5 49 54508.0 50 52573.5 51 50639.0 52 43438.5 53 36238.0 54 31533.5 55 26829.0 56 24510.5 57 22192.0 58 20613.5 59 19035.0 60 17886.5 61 16738.0 62 14830.0 63 12922.0 64 10794.0 65 8666.0 66 7577.5 67 6489.0 68 5433.0 69 4377.0 70 3944.5 71 3512.0 72 3029.0 73 2546.0 74 2215.0 75 1610.0 76 1336.0 77 996.0 78 656.0 79 483.5 80 311.0 81 220.5 82 130.0 83 94.0 84 58.0 85 45.5 86 33.0 87 27.5 88 22.0 89 15.0 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 555873.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.288920372583174 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99493919340973 23.152217603967312 2 9.845196093522052 6.160911132453569 3 3.385744944368484 3.1780891189866467 4 1.7284155881762742 2.1632103083671583 5 1.0972907279960438 1.7166521106921018 6 0.855091285299462 1.6052929882214801 7 0.632125805874893 1.3844973803832146 8 0.5571615788776552 1.3946387420932538 9 0.4957583792188599 1.3960570006277822 >10 7.2556824299123175 46.929168710055606 >50 0.10037550337857301 2.0617492105548494 >100 0.04351539163810966 2.430456848719584 >500 0.0017406156655243863 0.3944863110447906 >1k 0.0052218469965731595 2.750511780321961 >5k 0.0017406156655243863 3.282060753510708 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGC 6491 1.167712768923837 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCG 6004 1.0801028292433703 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTC 5584 1.0045460024142205 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3369 0.6060736894938232 No Hit GCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC 3156 0.5677555844590401 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAGATCAT 1633 0.29377213860000395 No Hit CCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC 1353 0.24340092071390407 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCT 1252 0.2252313028335609 No Hit CTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGCT 1180 0.2122787039485638 No Hit GAACTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCT 1088 0.19572816092884526 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAGATCATCGTA 1076 0.1935693944480124 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTC 1044 0.18781268383245814 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCC 882 0.15866933634121463 No Hit TCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC 680 0.12233010058052829 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 611 0.10991719331573939 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21947459221800664 0.0 2 0.0 0.0 0.0 1.284825850509019 0.0 3 0.0 0.0 0.0 1.62681044051429 0.0 4 0.0 0.0 0.0 2.2755197680045622 0.0 5 0.0 0.0 0.0 4.421873341572625 0.0 6 0.0 0.0 0.0 5.124192036670246 0.0 7 0.0 0.0 0.0 6.018101256941783 0.0 8 0.0 0.0 0.0 7.189591867207078 0.0 9 0.0 0.0 0.0 7.579968805824352 0.0 10 0.0 0.0 0.0 9.533292676564612 0.0 11 0.0 0.0 0.0 10.874066558368549 0.0 12 0.0 0.0 0.0 13.120622876088603 0.0 13 0.0 0.0 0.0 13.629552073944948 0.0 14 0.0 0.0 0.0 13.84830707733601 0.0 15 0.0 0.0 0.0 14.377204865140058 0.0 16 0.0 0.0 0.0 15.06081425073713 0.0 17 0.0 0.0 0.0 15.871071269876392 0.0 18 0.0 0.0 0.0 16.66981486778455 0.0 19 0.0 0.0 0.0 17.55472922771928 0.0 20 0.0 0.0 0.0 18.13579720547679 0.0 21 0.0 0.0 0.0 18.760220410057695 0.0 22 0.0 0.0 0.0 19.467396329737188 0.0 23 0.0 0.0 0.0 20.115565965607253 0.0 24 0.0 0.0 0.0 20.64356426737762 0.0 25 0.0 0.0 0.0 21.143858399310634 0.0 26 0.0 0.0 0.0 21.574352415030052 0.0 27 0.0 0.0 0.0 22.049101143606542 0.0 28 0.0 0.0 0.0 22.484812178321306 0.0 29 0.0 0.0 0.0 22.931676839853708 0.0 30 0.0 0.0 0.0 23.451579767320954 0.0 31 0.0 0.0 0.0 23.913375897012447 0.0 32 0.0 0.0 0.0 24.38254781218012 0.0 33 0.0 0.0 0.0 24.815560388793845 0.0 34 0.0 0.0 0.0 25.253610087196176 0.0 35 0.0 0.0 0.0 25.714326833647252 0.0 36 0.0 0.0 0.0 26.18116008512736 0.0 37 0.0 0.0 0.0 26.643675803645795 0.0 38 0.0 0.0 0.0 27.082265193668338 0.0 39 0.0 0.0 0.0 27.532368004921988 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTCA 30 2.1634714E-6 45.000004 16 TTGCGTG 30 2.1634714E-6 45.000004 1 GCGAACA 25 3.8881975E-5 45.0 33 CGCATCC 20 7.0301414E-4 45.0 26 TTCGTAG 35 1.2104101E-7 45.0 1 TATTGCG 20 7.0301414E-4 45.0 1 GCCGATT 25 3.8881975E-5 45.0 9 GCCTATT 20 7.0301414E-4 45.0 43 TTACGTA 20 7.0301414E-4 45.0 21 TATAGCG 40 6.8048394E-9 45.0 1 TTACGCG 20 7.0301414E-4 45.0 1 TGTAACG 20 7.0301414E-4 45.0 1 ATCGATG 25 3.8881975E-5 45.0 1 AATCGCG 25 3.8881975E-5 45.0 1 TACGGCT 780 0.0 42.115383 7 CGTTTTT 1755 0.0 42.05128 1 CCGATGA 585 0.0 41.153847 18 CGATGAA 585 0.0 41.153847 19 TTATGCG 45 1.9252184E-8 40.0 1 ACGGCTG 820 0.0 39.786587 8 >>END_MODULE