SRR3551768_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551768_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351890
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2211	0.6283213504220069	No Hit
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	1447	0.411208047969536	No Hit
CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT	813	0.2310381084998153	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	737	0.20944045014066895	No Hit
CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	674	0.19153712807979767	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC	661	0.18784279178152263	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG	655	0.18613771349001107	No Hit
CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA	609	0.17306544658842252	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC	564	0.16027735940208587	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	534	0.1517519679445281	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	493	0.14010059961919918	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	490	0.1392480604734434	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	475	0.13498536474466452	No Hit
TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	471	0.13384864588365683	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	468	0.13299610673790105	No Hit
GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA	403	0.11452442524652591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGAC	20	7.026607E-4	45.0	11
TCACACG	20	7.026607E-4	45.0	39
TCGGGCA	20	7.026607E-4	45.0	27
AAGGTAC	20	7.026607E-4	45.0	27
TCGATCA	20	7.026607E-4	45.0	17
ACGGGTC	20	7.026607E-4	45.0	5
AGTATAT	20	7.026607E-4	45.0	39
TGTTGCG	20	7.026607E-4	45.0	1
TACGCCC	20	7.026607E-4	45.0	28
CTTGCGT	35	1.2087185E-7	45.0	15
CGGGCCC	20	7.026607E-4	45.0	6
ACGTCGG	20	7.026607E-4	45.0	43
GCGTGCA	20	7.026607E-4	45.0	18
GCTACGA	55	1.8189894E-12	45.0	10
ATCGGTA	20	7.026607E-4	45.0	33
CGATAGA	20	7.026607E-4	45.0	10
AATACGC	20	7.026607E-4	45.0	26
CGCCCCC	20	7.026607E-4	45.0	27
CTATCGG	30	2.161194E-6	44.999996	2
GTTAGCG	25	3.885271E-5	44.999996	1