##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551751_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 226016 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07028263485771 31.0 30.0 33.0 28.0 34.0 2 30.976315836047007 31.0 31.0 34.0 28.0 34.0 3 30.895149015998868 31.0 30.0 34.0 27.0 34.0 4 34.79761167350984 35.0 35.0 37.0 32.0 37.0 5 34.48678854594365 35.0 35.0 37.0 32.0 37.0 6 34.67596541837746 35.0 35.0 37.0 32.0 37.0 7 35.191344860540845 36.0 35.0 37.0 32.0 37.0 8 34.50183615319269 36.0 35.0 37.0 30.0 37.0 9 36.21996672801926 39.0 35.0 39.0 32.0 39.0 10 35.98266936854028 37.0 35.0 39.0 32.0 39.0 11 36.3656511043466 37.0 35.0 39.0 32.0 39.0 12 36.442663351267164 38.0 35.0 39.0 32.0 39.0 13 36.35495717117372 39.0 35.0 39.0 32.0 39.0 14 37.333410024069096 39.0 36.0 40.0 32.0 41.0 15 37.39521538298174 39.0 36.0 41.0 32.0 41.0 16 37.6263140662608 39.0 36.0 41.0 33.0 41.0 17 37.269007503893526 39.0 36.0 41.0 32.0 41.0 18 37.34102895370239 39.0 36.0 40.0 32.0 41.0 19 37.26130008494974 39.0 36.0 40.0 32.0 41.0 20 36.927465312190286 39.0 35.0 40.0 31.0 41.0 21 37.034643565057344 39.0 35.0 40.0 31.0 41.0 22 37.03364806031431 39.0 35.0 40.0 31.0 41.0 23 36.99628787342489 39.0 35.0 41.0 31.0 41.0 24 36.98618681863231 39.0 35.0 41.0 31.0 41.0 25 36.831861461135496 39.0 35.0 40.0 31.0 41.0 26 36.79040864363585 39.0 35.0 40.0 31.0 41.0 27 36.63555677474161 39.0 35.0 40.0 30.0 41.0 28 36.425589338807875 39.0 35.0 40.0 30.0 41.0 29 36.5155077516636 39.0 35.0 41.0 30.0 41.0 30 36.24971683420643 38.0 35.0 40.0 30.0 41.0 31 36.324574366416535 39.0 35.0 40.0 30.0 41.0 32 35.93094736655812 39.0 35.0 40.0 28.0 41.0 33 35.79956286280617 39.0 35.0 40.0 27.0 41.0 34 35.662510618717256 39.0 35.0 40.0 26.0 41.0 35 35.54407652555571 39.0 35.0 41.0 25.0 41.0 36 35.5116894379159 39.0 35.0 40.0 25.0 41.0 37 35.341767839445 39.0 35.0 41.0 24.0 41.0 38 35.08017131530511 38.0 35.0 40.0 23.0 41.0 39 35.13956091604134 38.0 35.0 40.0 24.0 41.0 40 35.06103992637689 38.0 34.0 40.0 24.0 41.0 41 34.87813694605692 38.0 34.0 40.0 23.0 41.0 42 34.96244956109302 38.0 35.0 40.0 23.0 41.0 43 35.034948853178534 38.0 35.0 40.0 23.0 41.0 44 35.23590807730426 38.0 35.0 40.0 24.0 41.0 45 35.2599240761716 38.0 35.0 40.0 24.0 41.0 46 35.1150759238284 38.0 35.0 40.0 23.0 41.0 47 34.955892503185616 38.0 34.0 40.0 23.0 41.0 48 34.979523573552314 38.0 34.0 40.0 24.0 41.0 49 35.049496495823306 38.0 35.0 40.0 24.0 41.0 50 34.90600665439615 38.0 34.0 40.0 24.0 41.0 51 34.170921527679454 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 13.0 11 5.0 12 13.0 13 8.0 14 19.0 15 23.0 16 39.0 17 58.0 18 113.0 19 237.0 20 629.0 21 1366.0 22 1997.0 23 2477.0 24 2853.0 25 3227.0 26 3571.0 27 3494.0 28 3287.0 29 3573.0 30 4333.0 31 5464.0 32 7302.0 33 10145.0 34 16271.0 35 17474.0 36 19116.0 37 27639.0 38 45297.0 39 45955.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.596789607815374 15.359532068526121 17.74077941384681 15.302898909811693 2 27.984301996318845 34.7723170041059 20.32909174571712 16.914289253858133 3 27.790952852895366 33.436128415687385 24.04918235877106 14.723736372646185 4 25.14379512954835 20.71003822738213 37.13099957525131 17.015167067818208 5 32.98306314597197 25.107956958799377 23.32135777998018 18.58762211524848 6 23.004566048421353 39.33482585303695 24.300934447118788 13.359673651422908 7 65.69446410873566 5.871708197649724 23.243044740195383 5.190782953419227 8 64.27553801500778 16.966940393600453 12.436730142998725 6.3207914483930345 9 59.36438128274104 7.656537590259097 13.17296120628628 19.806119920713577 10 43.728762565482086 20.216267874840717 20.94055288121195 15.114416678465242 11 35.4085551465383 21.454233328613903 24.744265892680165 18.392945632167635 12 26.750318561517766 19.71807305677474 27.659103780263344 25.872504601444145 13 28.015715701543254 21.35910731983576 33.16535112558403 17.459825853036953 14 20.475984001132662 31.915882061446975 27.07640167067818 20.53173226674218 15 17.1686960215206 22.820065836047004 37.04737717683704 22.963860965595355 16 18.91724479682854 24.086347869177406 28.942641228939543 28.05376610505451 17 19.81718108452499 28.74309783378168 30.05008494973807 21.389636131955257 18 20.35032918023503 24.266866062579638 29.27978550191137 26.103019255273963 19 20.629955401387512 26.134432960498373 26.92641228939544 26.309199348718675 20 27.613974231912785 24.963276936146116 31.68404006795979 15.73870876398131 21 23.474001840577657 32.12117726178678 26.68970338383123 17.715117513804334 22 20.815782953419227 22.211701826419368 34.07103921846241 22.901476001698995 23 24.191650148662042 27.218869460569163 29.397918731417246 19.19156165935155 24 22.94572065694464 26.32601231771202 27.223736372646183 23.504530652697152 25 19.280935862947757 33.303394449950446 26.02957312756619 21.38609655953561 26 18.928305960639953 24.716834206427862 32.52734319694181 23.827516635990374 27 24.996902874132804 27.60954976638822 26.410077162678746 20.983470196800226 28 18.37436287696446 28.83910873566473 31.433615319269432 21.352913068101373 29 21.504229789041485 22.6452994478267 31.41326277785643 24.43720798527538 30 19.634008211808013 33.2113655670395 28.545766671386097 18.608859549766386 31 24.76107886167351 24.40490938694606 23.44480036811553 27.3892113832649 32 28.180748265609513 27.28036953136061 23.177562650431828 21.361319552598047 33 24.800456604842136 28.169687101798104 23.547890414837887 23.481965878521873 34 22.801925527396293 26.98393034121478 24.900891972249752 25.313252159139175 35 24.981417244796827 27.03923616027184 24.53852824578791 23.440818349143424 36 22.424076171598468 32.043306668554436 23.433739204304118 22.09887795554297 37 20.344134928500637 29.572242673085093 26.834825853036953 23.248796545377317 38 23.06341143989806 28.62717683703809 22.791306810137336 25.51810491292652 39 22.169669403936005 29.11121336542546 24.7947047996602 23.924412430978336 40 22.38691066119213 27.8272334701968 26.409192269573833 23.376663599037236 41 19.51631742885459 31.477859974515077 24.11422200198216 24.891600594648168 42 24.492513804332436 24.35447047996602 28.48692127990939 22.666094435792157 43 22.686889423757613 28.730709330312898 24.18412855727028 24.39827268865921 44 22.147104629760726 25.197773608948037 28.653281183633016 24.001840577658218 45 21.35601019396857 23.04969559677191 27.40248477983859 28.19180942942093 46 25.98621336542546 27.580348293926093 24.719931332295058 21.713507008353393 47 18.455773042616453 28.969188022086932 32.344170324224834 20.230868611071784 48 21.962161970833925 27.034811694747273 25.72826702534334 25.274759309075463 49 21.915705082825994 22.9908502052952 32.6910484213507 22.402396290528102 50 22.05153617443013 25.190694464108738 27.823693897777147 24.934075463683985 51 20.317145688800792 23.727523715135213 26.2286740761716 29.726656519892398 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 191.0 2 312.0 3 1212.5 4 2113.0 5 1487.0 6 861.0 7 874.0 8 887.0 9 869.0 10 851.0 11 835.5 12 820.0 13 804.0 14 788.0 15 752.0 16 716.0 17 694.0 18 672.0 19 689.5 20 707.0 21 727.5 22 748.0 23 772.0 24 796.0 25 993.5 26 1379.5 27 1568.0 28 2055.0 29 2542.0 30 2906.0 31 3270.0 32 3706.0 33 4142.0 34 4424.0 35 4706.0 36 5484.5 37 6263.0 38 6773.0 39 7283.0 40 8266.0 41 9249.0 42 9701.5 43 10154.0 44 11667.5 45 13181.0 46 23731.0 47 34281.0 48 27055.5 49 19830.0 50 20195.0 51 20560.0 52 18228.0 53 15896.0 54 14353.0 55 12810.0 56 12288.5 57 11767.0 58 10900.5 59 10034.0 60 9122.0 61 8210.0 62 7177.5 63 6145.0 64 5305.0 65 4465.0 66 3652.5 67 2840.0 68 2392.5 69 1945.0 70 1597.5 71 1250.0 72 998.5 73 747.0 74 693.5 75 465.0 76 290.0 77 276.0 78 262.0 79 182.0 80 102.0 81 61.5 82 21.0 83 17.0 84 13.0 85 12.5 86 12.0 87 7.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 226016.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.44541979328897 #Duplication Level Percentage of deduplicated Percentage of total 1 75.51328182876495 25.25573410731984 2 7.623822626732987 5.099638963613195 3 2.9421102762197058 2.952003397989523 4 1.8150068790348184 2.4281466798810705 5 1.329505767806117 2.223293926093728 6 1.1654672452111334 2.338772476284865 7 0.9683564398349032 2.2670961347869176 8 0.829452852153667 2.21931190712162 9 0.8069636998624193 2.4290315729859833 >10 6.921367340459309 40.15335197508141 >50 0.04497830458249551 0.952144980886309 >100 0.026457826224997354 1.645458728585587 >500 0.005291565244999471 1.5556420784369247 >1k 0.005291565244999471 3.7709719665864365 >5k 0.0026457826224997355 4.709401104346595 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGC 5497 2.4321286988531785 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG 5147 2.277272405493416 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTC 4643 2.054279343055359 No Hit GCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 1712 0.7574684978054651 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCAAGAT 1167 0.5163351267166927 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1001 0.44288899900891976 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCT 971 0.4296156024352258 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTA 885 0.39156519892396996 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTC 833 0.3685579781962339 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT 827 0.36590329888149514 No Hit CCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 367 0.162377884751522 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGCT 343 0.1517591674925669 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATG 257 0.11370876398131106 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTT 237 0.10485983293218179 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4244655245646327E-4 0.0 0.0 0.15751097267450093 0.0 2 4.4244655245646327E-4 0.0 0.0 1.2738036245221578 0.0 3 4.4244655245646327E-4 0.0 0.0 1.5091851904289961 0.0 4 4.4244655245646327E-4 0.0 0.0 2.1657758742743876 0.0 5 4.4244655245646327E-4 0.0 0.0 5.01026476001699 0.0 6 4.4244655245646327E-4 0.0 0.0 5.5730567747416115 0.0 7 4.4244655245646327E-4 0.0 0.0 6.4473311623955825 0.0 8 4.4244655245646327E-4 0.0 0.0 7.357886167350984 0.0 9 4.4244655245646327E-4 0.0 0.0 7.58353390910378 0.0 10 4.4244655245646327E-4 0.0 0.0 10.43333215347586 0.0 11 4.4244655245646327E-4 0.0 0.0 11.219559677190995 0.0 12 4.4244655245646327E-4 0.0 0.0 14.40915687384964 0.0 13 4.4244655245646327E-4 0.0 0.0 14.793642927934306 0.0 14 4.4244655245646327E-4 0.0 0.0 14.980797819623389 0.0 15 4.4244655245646327E-4 0.0 0.0 15.634291377601587 0.0 16 4.4244655245646327E-4 0.0 0.0 16.087356647317005 0.0 17 4.4244655245646327E-4 0.0 0.0 16.565198923969984 0.0 18 4.4244655245646327E-4 0.0 0.0 17.02357355231488 0.0 19 4.4244655245646327E-4 0.0 0.0 17.971736514229082 0.0 20 4.4244655245646327E-4 0.0 0.0 18.414625513238 0.0 21 4.4244655245646327E-4 0.0 0.0 18.79999646042758 0.0 22 4.4244655245646327E-4 0.0 0.0 19.219435792156307 0.0 23 4.4244655245646327E-4 0.0 0.0 19.60082472037378 0.0 24 4.4244655245646327E-4 0.0 0.0 19.933986974373497 0.0 25 4.4244655245646327E-4 0.0 0.0 20.199454905847375 0.0 26 4.4244655245646327E-4 0.0 0.0 20.469789749398274 0.0 27 4.4244655245646327E-4 0.0 0.0 20.817110293076595 0.0 28 4.4244655245646327E-4 0.0 0.0 21.1047005521733 0.0 29 4.4244655245646327E-4 0.0 0.0 21.365744018122612 0.0 30 4.4244655245646327E-4 0.0 0.0 21.660413422058614 0.0 31 4.4244655245646327E-4 0.0 0.0 21.95862239841427 0.0 32 4.4244655245646327E-4 0.0 0.0 22.252406909245362 0.0 33 4.4244655245646327E-4 0.0 0.0 22.5355727028175 0.0 34 4.4244655245646327E-4 0.0 0.0 22.813871584312615 0.0 35 4.4244655245646327E-4 0.0 0.0 23.12756619000425 0.0 36 4.4244655245646327E-4 0.0 0.0 23.419580914625513 0.0 37 4.4244655245646327E-4 0.0 0.0 23.729735947897495 0.0 38 8.848931049129265E-4 0.0 0.0 24.05670395016282 0.0 39 8.848931049129265E-4 0.0 0.0 24.396502902449384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 35 1.2061355E-7 45.000004 40 ACGGGAT 35 1.2061355E-7 45.000004 5 TCGTTGG 20 7.021251E-4 45.0 12 CATATTC 20 7.021251E-4 45.0 33 CGTATGG 20 7.021251E-4 45.0 2 CAACGAG 45 3.8198777E-10 45.0 14 CGTGCGG 20 7.021251E-4 45.0 2 TAGACGG 20 7.021251E-4 45.0 2 CGTTGTG 20 7.021251E-4 45.0 34 ATCGTTG 20 7.021251E-4 45.0 11 ACGGCTA 20 7.021251E-4 45.0 30 CTAGTAG 20 7.021251E-4 45.0 1 CGCTAGG 25 3.880832E-5 45.0 2 GAGCGAT 20 7.021251E-4 45.0 25 TCTCGTA 20 7.021251E-4 45.0 28 CGCAGCG 20 7.021251E-4 45.0 13 TTTGCGG 25 3.880832E-5 45.0 2 CACGTGA 25 3.880832E-5 45.0 43 CACCGTG 20 7.021251E-4 45.0 16 ATACGCC 25 3.880832E-5 45.0 28 >>END_MODULE