##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551745_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 306807 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.04353225317545 31.0 30.0 33.0 28.0 34.0 2 30.934730954639235 31.0 30.0 34.0 28.0 34.0 3 30.816184115747035 31.0 30.0 34.0 27.0 34.0 4 34.82719429478467 35.0 35.0 37.0 32.0 37.0 5 34.511181296385026 35.0 35.0 37.0 32.0 37.0 6 34.68988321648463 35.0 35.0 37.0 32.0 37.0 7 35.12323056514356 35.0 35.0 37.0 32.0 37.0 8 34.37213948834283 35.0 35.0 37.0 30.0 37.0 9 35.970088687676615 39.0 35.0 39.0 31.0 39.0 10 35.92367188493092 37.0 35.0 39.0 32.0 39.0 11 36.38492602841526 37.0 35.0 39.0 32.0 39.0 12 36.402976464031134 38.0 35.0 39.0 32.0 39.0 13 36.28656451775872 38.0 35.0 39.0 32.0 39.0 14 37.267174477766154 39.0 36.0 40.0 32.0 41.0 15 37.21763519085288 39.0 36.0 41.0 31.0 41.0 16 37.49320908584224 39.0 36.0 40.0 33.0 41.0 17 37.08357371246419 39.0 35.0 40.0 31.0 41.0 18 37.14901876423941 39.0 36.0 40.0 32.0 41.0 19 37.07466909164393 39.0 35.0 40.0 32.0 41.0 20 36.70127474275359 39.0 35.0 40.0 30.0 41.0 21 36.885393749164784 39.0 35.0 40.0 31.0 41.0 22 36.91252155263732 39.0 35.0 40.0 31.0 41.0 23 36.853458363075156 39.0 35.0 40.0 31.0 41.0 24 36.82014426007229 39.0 35.0 40.0 31.0 41.0 25 36.7041853673482 38.0 35.0 40.0 31.0 41.0 26 36.515415228466104 38.0 35.0 40.0 30.0 41.0 27 36.42180589099988 38.0 35.0 40.0 30.0 41.0 28 36.21172267907838 38.0 35.0 40.0 30.0 41.0 29 36.12685173415209 38.0 35.0 40.0 30.0 41.0 30 35.882818840508854 38.0 35.0 40.0 29.0 41.0 31 36.07536333916762 38.0 35.0 40.0 30.0 41.0 32 35.593115541692335 38.0 35.0 40.0 26.0 41.0 33 35.53908157245434 38.0 35.0 40.0 26.0 41.0 34 35.10542132350305 38.0 34.0 40.0 24.0 41.0 35 34.991867851776526 38.0 34.0 40.0 23.0 41.0 36 35.06457805721512 38.0 34.0 40.0 25.0 41.0 37 35.200106255724286 38.0 35.0 40.0 25.0 41.0 38 35.267715534521706 38.0 35.0 40.0 25.0 41.0 39 34.863722144540375 38.0 34.0 40.0 23.0 41.0 40 35.0190771397002 38.0 34.0 40.0 25.0 41.0 41 34.750455498081855 38.0 34.0 40.0 23.0 41.0 42 34.59827187776028 38.0 34.0 40.0 23.0 41.0 43 34.617381611240944 38.0 34.0 40.0 22.0 41.0 44 34.889885172111455 38.0 35.0 40.0 23.0 41.0 45 34.95066931328164 38.0 35.0 40.0 23.0 41.0 46 34.79134113628437 38.0 34.0 40.0 23.0 41.0 47 34.53862200014993 37.0 34.0 40.0 23.0 41.0 48 34.58043656109541 38.0 34.0 40.0 23.0 41.0 49 34.675988487876744 38.0 34.0 40.0 23.0 41.0 50 34.50771331814463 37.0 34.0 40.0 23.0 41.0 51 33.68216500927293 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 8.0 10 17.0 11 9.0 12 16.0 13 9.0 14 22.0 15 24.0 16 36.0 17 81.0 18 138.0 19 280.0 20 644.0 21 1522.0 22 2864.0 23 3743.0 24 4551.0 25 4827.0 26 4726.0 27 4587.0 28 4707.0 29 5402.0 30 6624.0 31 8387.0 32 10899.0 33 14737.0 34 24236.0 35 24994.0 36 26543.0 37 38624.0 38 60914.0 39 52622.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.02100017274703 15.508772616009415 16.79427131714726 16.67595589409629 2 27.97621957778017 36.779799678625324 18.87375451016437 16.370226233430138 3 25.233778890312152 36.46755126186821 23.97305146231996 14.325618385499677 4 24.85438728581812 19.821907583594896 39.61513264038956 15.70857249019742 5 33.8551597584149 23.73511686499982 23.361918078792204 19.047805297793076 6 21.198668870006227 40.391190553018674 24.948257373527984 13.461883203447117 7 61.30661947087257 5.750194747838218 27.149315367641545 5.793870413647668 8 58.99343887199444 18.71860811519946 14.62450335227032 7.663449660535776 9 54.428028043688705 7.219848308545764 15.321358378394233 23.030765269371297 10 42.97750703210813 18.740445948104185 22.58064516129032 15.701401858497361 11 36.17388129997034 20.763215963129916 24.94727956011434 18.115623176785405 12 26.66431991447392 17.393670939711285 28.990212087729418 26.951797058085376 13 27.84942977181094 20.004758691946403 34.97051892557862 17.175292610664034 14 20.059842180915037 30.263325152294442 26.92800359835336 22.74882906843716 15 16.474526330885542 21.642922097605336 39.049304611694 22.833246959815128 16 19.463375998591946 22.372370904184063 27.779027206028545 30.385225891195443 17 19.30953335484523 28.056400277699012 31.082080917319356 21.551985450136403 18 19.038027163656633 24.020964319588536 30.16032880605723 26.7806797106976 19 19.468916941269267 26.141189738174162 26.39476935011261 27.99512397044396 20 25.912381399381367 24.767687829808317 33.31410300286499 16.00582776794532 21 21.987438357012714 32.67037583888243 27.987627400939353 17.354558403165505 22 18.64462023356703 21.948651758271488 34.77528218065429 24.631445827507196 23 24.031068391529526 26.8605344728119 29.93771328555085 19.17068385010772 24 24.03237214274772 24.44533534111021 27.09292812745472 24.42936438868735 25 19.204907319585278 33.73814808658212 24.936197674759704 22.120746919072904 26 18.059561874403126 23.24588422037307 33.436003741765994 25.25855016345781 27 24.97693990032822 25.06266154292438 25.56069450827393 24.39970404847347 28 15.528328884282303 28.637547383208332 31.424641549899444 24.409482182609914 29 21.321221484516325 24.348205875354864 31.030908682005297 23.299663958123514 30 18.62147864944411 29.1945750911811 27.133344415218687 25.050601844156102 31 23.08161156688081 21.80980225353398 23.533687301789072 31.574898877796137 32 26.680290866896776 25.154250066002405 28.19492384463197 19.97053522246885 33 24.386340598486996 19.972490849296136 24.78594034686301 30.855228205353853 34 24.438816585019246 23.59496360904412 26.983087087321998 24.983132718614634 35 21.50016133921325 21.300035527220697 29.640783945607502 27.559019187958555 36 19.78833598972644 30.07428122565652 26.38531715378071 23.752065630836324 37 18.942853324728574 22.485471322362265 32.81672191312454 25.75495343978462 38 18.120186306049078 23.54313949812097 24.519649160547186 33.81702503528277 39 24.937501425977896 23.54965825421193 30.24768013767613 21.265160182134046 40 21.034396216513965 19.78116535802638 30.22812386940324 28.956314556056412 41 21.177156974906048 23.218179506986477 27.546307613581178 28.0583559045263 42 19.82353727261764 21.27819769431597 34.769415300172426 24.12884973289397 43 22.082612195940772 22.56011107960379 28.915246392683347 26.44203033177209 44 21.95680020338519 20.27267956728497 30.542979788596742 27.2275404407331 45 20.514851356064238 19.277591449999512 28.423406245620207 31.784150948316043 46 26.634985512064585 24.732812484721663 27.36345650522967 21.268745497984074 47 16.161951976323877 23.32052397761459 36.27785545962119 24.239668586440335 48 21.829358521806867 22.937547057270532 27.802820665760557 27.430273755162037 49 21.25179673214757 18.367247161896564 37.22079352817895 23.16016257777691 50 21.282434885775096 20.201951063698026 30.755817174966673 27.759796875560205 51 19.399818126705064 19.914799857891115 29.002923662106795 31.682458353297022 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 90.0 1 252.0 2 414.0 3 2259.5 4 4105.0 5 2769.0 6 1433.0 7 1343.0 8 1253.0 9 1222.5 10 1192.0 11 1156.0 12 1120.0 13 1129.0 14 1138.0 15 1052.0 16 966.0 17 940.0 18 914.0 19 891.5 20 869.0 21 1010.0 22 1151.0 23 1198.5 24 1246.0 25 1410.0 26 1740.5 27 1907.0 28 2233.5 29 2560.0 30 3152.0 31 3744.0 32 3966.0 33 4188.0 34 5041.5 35 5895.0 36 6013.0 37 6131.0 38 6866.5 39 7602.0 40 8784.0 41 9966.0 42 10797.0 43 11628.0 44 13406.0 45 15184.0 46 34581.5 47 53979.0 48 40600.5 49 27222.0 50 27514.0 51 27806.0 52 24364.5 53 20923.0 54 19791.0 55 18659.0 56 17255.5 57 15852.0 58 14997.0 59 14142.0 60 12899.0 61 11656.0 62 10790.5 63 9925.0 64 8138.5 65 6352.0 66 5377.0 67 4402.0 68 3619.0 69 2836.0 70 2558.0 71 2280.0 72 1907.0 73 1534.0 74 1408.0 75 1051.0 76 820.0 77 628.0 78 436.0 79 364.0 80 292.0 81 195.0 82 98.0 83 64.5 84 31.0 85 17.0 86 3.0 87 2.0 88 1.0 89 2.0 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 306807.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.394190390084994 #Duplication Level Percentage of deduplicated Percentage of total 1 73.2807426893467 24.471510732948726 2 9.286503788456947 6.202305511399538 3 3.484759401767624 3.4911215677880016 4 2.14056672634132 2.8592997120849204 5 1.589852466364258 2.6545917976957116 6 1.340026704964056 2.6849464148020763 7 1.1151895697937069 2.606859697030962 8 0.9513086326656253 2.5414545279173852 9 0.7984197428940922 2.3996322814867224 >10 5.890718877398826 31.77151848922719 >50 0.07094843770888831 1.6274519028634866 >100 0.037972403280813465 2.2895114836059838 >500 0.0019985475410954456 0.4227971213713426 >1k 0.007994190164381782 5.036858524056073 >5k 0.002997821311643168 8.940140235721893 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGC 9529 3.105861339539189 No Hit GAATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTC 8633 2.813821066664059 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCG 8629 2.812517315445867 No Hit GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 3457 1.1267669903229065 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2074 0.6759950066328343 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCT 1935 0.6306896518006434 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCTCGTTT 1864 0.6075480676777257 No Hit GAACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 1622 0.5286711189770767 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCTCGTTTCGTA 1573 0.5127001665542181 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTC 1479 0.4820620129266933 No Hit CCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 1090 0.35527220695746836 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 762 0.24836460706567973 TruSeq Adapter, Index 14 (95% over 23bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATG 505 0.16459859129680873 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATCGAATGC 393 0.1280935571874175 No Hit GAATGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTT 388 0.1264638681646768 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCACCTCGTT 384 0.12516011694648427 No Hit TCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 383 0.12483417914193613 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTAT 358 0.11668573402823273 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCTCGTTTCGT 339 0.11049291574181815 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCC 332 0.1082113511099812 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.259378045481361E-4 0.0 0.0 0.2623799326612496 0.0 2 3.259378045481361E-4 0.0 0.0 2.0243997040484736 0.0 3 3.259378045481361E-4 0.0 0.0 2.3910797341651264 0.0 4 3.259378045481361E-4 0.0 0.0 3.3721525258550162 0.0 5 3.259378045481361E-4 0.0 0.0 7.32186684136933 0.0 6 3.259378045481361E-4 0.0 0.0 8.144207922244277 0.0 7 3.259378045481361E-4 0.0 0.0 9.456107585550525 0.0 8 3.259378045481361E-4 0.0 0.0 10.79147477078424 0.0 9 3.259378045481361E-4 0.0 0.0 11.136642905800715 0.0 10 3.259378045481361E-4 0.0 0.0 14.827888542308356 0.0 11 3.259378045481361E-4 0.0 0.0 15.957588972872196 0.0 12 3.259378045481361E-4 0.0 0.0 20.109384727206354 0.0 13 3.259378045481361E-4 0.0 0.0 20.675538693706468 0.0 14 3.259378045481361E-4 0.0 0.0 20.980290540958975 0.0 15 3.259378045481361E-4 0.0 0.0 21.84532947422973 0.0 16 3.259378045481361E-4 0.0 0.0 22.51285009794431 0.0 17 3.259378045481361E-4 0.0 0.0 23.153317883881396 0.0 18 3.259378045481361E-4 0.0 0.0 23.768362521063732 0.0 19 3.259378045481361E-4 0.0 0.0 24.93489392354151 0.0 20 3.259378045481361E-4 0.0 0.0 25.528752603428213 0.0 21 3.259378045481361E-4 0.0 0.0 26.084476560182786 0.0 22 3.259378045481361E-4 0.0 0.0 26.70603995345608 0.0 23 3.259378045481361E-4 0.0 0.0 27.229822005364937 0.0 24 3.259378045481361E-4 0.0 0.0 27.642785203727424 0.0 25 3.259378045481361E-4 0.0 0.0 27.9967536594667 0.0 26 3.259378045481361E-4 0.0 0.0 28.340292105460435 0.0 27 3.259378045481361E-4 0.0 0.0 28.79595315621873 0.0 28 3.259378045481361E-4 0.0 0.0 29.14568442049888 0.0 29 3.259378045481361E-4 0.0 0.0 29.501608503065444 0.0 30 3.259378045481361E-4 0.0 0.0 29.884911361214055 0.0 31 3.259378045481361E-4 0.0 0.0 30.265932654730825 0.0 32 3.259378045481361E-4 0.0 0.0 30.629353306801995 0.0 33 3.259378045481361E-4 0.0 0.0 30.96637299670477 0.0 34 3.259378045481361E-4 0.0 0.0 31.3112151939167 0.0 35 3.259378045481361E-4 0.0 0.0 31.641716127728508 0.0 36 3.259378045481361E-4 0.0 0.0 31.965046429840257 0.0 37 3.259378045481361E-4 0.0 0.0 32.2909842343884 0.0 38 3.259378045481361E-4 0.0 0.0 32.65375301085047 0.0 39 3.259378045481361E-4 0.0 0.0 33.01717366292164 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCC 30 2.160281E-6 45.000004 34 ATACTCC 30 2.160281E-6 45.000004 28 CCCCGTA 30 2.160281E-6 45.000004 40 CACAACG 95 0.0 45.000004 12 ACTGCGA 25 3.884099E-5 45.0 30 GTTTCGA 20 7.0251944E-4 45.0 44 ACGTTAT 20 7.0251944E-4 45.0 21 GCGCGAA 20 7.0251944E-4 45.0 13 TCGATCA 20 7.0251944E-4 45.0 17 TCCTACG 20 7.0251944E-4 45.0 44 ACGGGCC 20 7.0251944E-4 45.0 5 CGTTATT 25 3.884099E-5 45.0 1 AAACGCC 20 7.0251944E-4 45.0 5 CCCGTAA 20 7.0251944E-4 45.0 41 TCGTGAA 20 7.0251944E-4 45.0 43 GAAACGC 20 7.0251944E-4 45.0 4 GCGATTA 25 3.884099E-5 45.0 9 CCGACGG 20 7.0251944E-4 45.0 40 CGATCGA 55 1.8189894E-12 45.0 41 CGATCAC 50 2.1827873E-11 45.0 34 >>END_MODULE