SRR3551737_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551737_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	692613
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC	16379	2.3648126731666888	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG	13178	1.9026498203181288	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC	12785	1.8459081767162906	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5275	0.7616085750628417	No Hit
GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC	4297	0.620404179534603	No Hit
GAACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCT	4138	0.5974476367033249	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCT	2657	0.3836197125956342	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAAGCAGT	2651	0.38275342796049167	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTC	1987	0.286884595004714	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTA	1965	0.28370821800919127	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTT	1694	0.24458102865525191	No Hit
CTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGCT	832	0.12012480273976955	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATATGCG	20	7.031342E-4	45.000004	1
GCGCATA	20	7.031342E-4	45.000004	1
GCGATAT	20	7.031342E-4	45.000004	9
TTAACGG	30	2.1642481E-6	45.000004	2
CAATCGA	40	6.8084773E-9	45.000004	41
CGATCGA	40	6.8084773E-9	45.000004	41
TCGACAC	30	2.1642481E-6	45.000004	34
ACCGCGA	25	3.8891954E-5	45.0	30
CCGTCGA	100	0.0	45.0	41
ACGCGTA	25	3.8891954E-5	45.0	40
TACGGCT	1250	0.0	42.84	7
CGTTTTT	3220	0.0	42.6941	1
GTCGAAT	260	0.0	42.403843	43
CGATGAA	2115	0.0	41.595745	19
GATACCT	1485	0.0	41.515152	5
CGGCGAA	190	0.0	41.44737	31
ACGGCTG	1310	0.0	41.39313	8
CCGATGA	2100	0.0	41.14286	18
CGAATGC	350	0.0	41.142857	45
CCCGTCG	115	0.0	41.08696	40