##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551737_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 692613 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.334505705206226 31.0 31.0 33.0 30.0 34.0 2 31.31668334264589 31.0 31.0 34.0 28.0 34.0 3 31.224197351190348 31.0 31.0 34.0 28.0 34.0 4 35.060618267344104 35.0 35.0 37.0 32.0 37.0 5 35.277200976591544 35.0 35.0 37.0 33.0 37.0 6 35.184316494203834 36.0 35.0 37.0 33.0 37.0 7 35.50016098456136 37.0 35.0 37.0 33.0 37.0 8 35.02792179759837 37.0 35.0 37.0 32.0 37.0 9 36.84209363670621 39.0 37.0 39.0 32.0 39.0 10 36.460258470458975 38.0 35.0 39.0 32.0 39.0 11 36.675537421330525 38.0 35.0 39.0 32.0 39.0 12 36.68695794043715 39.0 35.0 39.0 33.0 39.0 13 36.61223078400203 39.0 35.0 39.0 32.0 39.0 14 37.63479605493977 39.0 36.0 41.0 33.0 41.0 15 37.63593521923499 40.0 36.0 41.0 32.0 41.0 16 37.8588721262812 40.0 36.0 41.0 33.0 41.0 17 37.55090360706484 39.0 36.0 41.0 32.0 41.0 18 37.58565750281903 39.0 36.0 41.0 33.0 41.0 19 37.49713909499244 39.0 36.0 41.0 33.0 41.0 20 37.18702363368865 39.0 35.0 41.0 32.0 41.0 21 37.236212719079774 39.0 35.0 40.0 32.0 41.0 22 37.353614500449744 39.0 35.0 41.0 32.0 41.0 23 37.31834083391447 39.0 35.0 41.0 32.0 41.0 24 37.289015655207166 39.0 35.0 41.0 32.0 41.0 25 37.062752215162 39.0 35.0 40.0 32.0 41.0 26 37.02862060053739 39.0 35.0 41.0 32.0 41.0 27 37.04860578707012 39.0 35.0 41.0 32.0 41.0 28 36.92118686770245 39.0 35.0 41.0 31.0 41.0 29 36.93765782623196 39.0 35.0 41.0 31.0 41.0 30 36.66344841924711 39.0 35.0 41.0 31.0 41.0 31 36.56499805807861 39.0 35.0 40.0 30.0 41.0 32 36.329855200523234 39.0 35.0 40.0 30.0 41.0 33 36.308662990732195 39.0 35.0 41.0 30.0 41.0 34 36.04663354571745 39.0 35.0 41.0 29.0 41.0 35 35.986885894431666 39.0 35.0 41.0 29.0 41.0 36 35.880783352319405 39.0 35.0 41.0 27.0 41.0 37 35.68728424098306 39.0 35.0 41.0 27.0 41.0 38 35.53339166316543 39.0 35.0 41.0 26.0 41.0 39 35.54556007467374 39.0 35.0 40.0 26.0 41.0 40 35.39802169465488 38.0 35.0 40.0 25.0 41.0 41 35.35828088701771 38.0 35.0 40.0 25.0 41.0 42 35.294027111821464 38.0 35.0 40.0 25.0 41.0 43 35.32994904802538 38.0 35.0 40.0 26.0 41.0 44 35.5287902479451 39.0 35.0 40.0 26.0 41.0 45 35.4590528910084 39.0 35.0 40.0 26.0 41.0 46 35.436561254264646 38.0 35.0 40.0 26.0 41.0 47 35.10769650584093 38.0 35.0 40.0 24.0 41.0 48 35.146459855648104 38.0 35.0 40.0 25.0 41.0 49 35.259807424925604 38.0 35.0 40.0 26.0 41.0 50 35.11790278265063 38.0 35.0 40.0 26.0 41.0 51 34.345116248178996 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 12.0 9 24.0 10 30.0 11 30.0 12 24.0 13 21.0 14 26.0 15 37.0 16 74.0 17 143.0 18 273.0 19 636.0 20 1830.0 21 3692.0 22 4988.0 23 5828.0 24 6925.0 25 8150.0 26 9178.0 27 9700.0 28 9905.0 29 10385.0 30 12430.0 31 15486.0 32 20305.0 33 28782.0 34 49379.0 35 51367.0 36 53676.0 37 81960.0 38 144456.0 39 162833.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.09381285075504 15.471699202873754 18.19024476872366 18.244243177647547 2 28.845545780977254 33.227502227073415 22.121011300683065 15.805940691266262 3 28.448498656536913 32.39023812720812 25.30431857328696 13.856944642968006 4 25.978576780972922 21.383658695404215 35.931032192580844 16.70673233104201 5 31.567267723822685 24.308091242873004 25.163980462393866 18.960660570910452 6 23.743851183850147 37.32170779352972 25.441913449502103 13.492527573118032 7 68.76365300680179 5.785481935799646 20.887999503330143 4.562865554068433 8 68.60844367633874 13.119736418461681 13.017370450742332 5.254449454457251 9 63.07187419237006 6.682519675489776 14.00017036931158 16.245435762828592 10 43.32448279197762 19.912563004159612 21.5427663067254 15.220187897137363 11 33.8526709721013 22.208072906514893 26.147213523280676 17.792042598103126 12 27.150371130775774 19.98244329806111 29.383219777855746 23.483965793307373 13 27.519408385346505 20.093472112131884 33.78538953210523 18.60172997041638 14 20.662476736648028 28.00496092334392 30.276359236687732 21.056203103320325 15 18.9694677980344 23.4458492693611 36.29848125865382 21.28620167395068 16 22.7993121699997 25.178562920418763 27.52417295083979 24.49795195874175 17 22.296145177754386 28.122198110633214 30.16648546879715 19.41517124281525 18 21.987747847643632 25.416502433537918 29.223534643444466 23.37221507537398 19 21.385246883901978 27.11846298004802 27.51421067753565 23.982079458514352 20 26.14779104637077 26.499502608238657 31.48164992571609 15.871056419674478 21 23.077100776335413 30.637311167997133 29.38740682025893 16.89818123540852 22 21.254293523222927 21.615389835304853 34.976964047743834 22.153352593728386 23 24.641755208175418 25.39614474461207 31.60408482081624 18.358015226396272 24 23.90411384135152 25.31269265809334 28.696544823732733 22.08664867682241 25 20.807001889944313 31.802319621491364 26.54859207089674 20.842086417667584 26 20.2576330504914 24.600606688006145 31.882595331014578 23.259164930487877 27 25.295800107708054 25.469923319371713 27.526194281655126 21.708082291265107 28 18.463701951883664 29.843938822979066 29.94688231378851 21.745476911348764 29 23.110452734788403 27.573406794270394 29.15018921100239 20.16595125993881 30 24.26030120716764 29.207363996921803 28.392478916797693 18.13985587911287 31 23.7666633459089 26.67882352771317 25.372177536373126 24.182335590004808 32 27.910824659658424 29.803223445127365 24.566677206463062 17.71927468875115 33 28.130283433894544 24.585302326118626 24.670342601135122 22.61407163885171 34 22.432585007789342 27.218807616952034 26.720838332517584 23.62776904274104 35 25.25450720676626 28.431750486924155 25.391813321436356 20.921928984873226 36 23.8304796473644 33.81166683270456 23.73403329131853 18.623820228612516 37 24.25423721472164 28.78317328724699 26.57342556377082 20.389163934260544 38 23.981935077741827 29.008984815474154 23.492773020431322 23.516307086352697 39 24.03189082503505 28.047553251238426 25.181594916641757 22.738961007084765 40 24.101915499709072 25.89627974063438 26.963975553447593 23.03782920620895 41 21.711547429805677 27.01941777009672 25.27529803800968 25.99373676208792 42 21.56500094569406 27.17376081592462 29.55936432033473 21.701873918046584 43 25.489414723662417 25.396866648474692 25.916059906470135 23.197658721392756 44 23.644805973898844 23.45624468498281 28.272354114057922 24.62659522706042 45 21.959016073911407 23.398492375973305 27.42483897934344 27.217652570771843 46 25.380551621179503 27.648629176755275 25.607806957131906 21.36301224493332 47 19.92295841978132 26.316139027133477 32.63684048667871 21.124062066406495 48 21.353627494719273 26.759243618008906 27.727605459325773 24.159523427946052 49 22.083327919054362 23.735043956726194 32.04747817323671 22.134149950982728 50 22.32126743217352 24.185945109317903 29.408486413047402 24.084301045461174 51 20.502647221464223 23.66963946677293 28.248964428909073 27.57874888285377 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 521.5 2 932.0 3 5561.0 4 10190.0 5 6788.5 6 3387.0 7 3248.5 8 3110.0 9 3067.0 10 3024.0 11 2937.0 12 2850.0 13 2699.5 14 2549.0 15 2536.5 16 2524.0 17 2508.5 18 2493.0 19 2408.0 20 2323.0 21 2364.0 22 2405.0 23 2648.0 24 2891.0 25 3330.0 26 4679.5 27 5590.0 28 6388.5 29 7187.0 30 8409.5 31 9632.0 32 11143.5 33 12655.0 34 14850.0 35 17045.0 36 18129.5 37 19214.0 38 20481.0 39 21748.0 40 23607.5 41 25467.0 42 27971.0 43 30475.0 44 33430.0 45 36385.0 46 67769.0 47 99153.0 48 78030.5 49 56908.0 50 57418.0 51 57928.0 52 52931.5 53 47935.0 54 44905.5 55 41876.0 56 39495.0 57 37114.0 58 34355.0 59 31596.0 60 29985.5 61 28375.0 62 25369.5 63 22364.0 64 19028.0 65 15692.0 66 12820.0 67 9948.0 68 7851.0 69 5754.0 70 4913.0 71 4072.0 72 3285.5 73 2499.0 74 2086.0 75 1287.5 76 902.0 77 701.5 78 501.0 79 360.0 80 219.0 81 154.0 82 89.0 83 62.5 84 36.0 85 23.5 86 11.0 87 8.5 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 692613.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.41986153781582 #Duplication Level Percentage of deduplicated Percentage of total 1 71.57797656642005 24.63704042573204 2 8.207817958878728 5.650239153444078 3 3.5772550801891616 3.693858736366775 4 2.458017624129179 3.3841850512014946 5 1.998956688294539 3.4401906215594447 6 1.7014114547119745 3.513740801402397 7 1.4910650760435535 3.5925577422904356 8 1.2966249798967813 3.570372181961635 9 1.162853646733417 3.6022735358377562 >10 6.449700347764072 31.92958876753239 >50 0.04529892833094752 1.0896793717825206 >100 0.026247977098392817 1.6668684554558444 >500 0.002116772346644582 0.46542336276999446 >1k 0.0029634812853024145 2.8253267316053297 >5k 4.233544693289163E-4 0.7686625668790611 >10k+ 0.001270063407986749 6.169992494178806 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC 16379 2.3648126731666888 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 13178 1.9026498203181288 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC 12785 1.8459081767162906 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5275 0.7616085750628417 No Hit GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 4297 0.620404179534603 No Hit GAACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCT 4138 0.5974476367033249 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCT 2657 0.3836197125956342 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGAAGCAGT 2651 0.38275342796049167 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTC 1987 0.286884595004714 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTA 1965 0.28370821800919127 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTT 1694 0.24458102865525191 No Hit CTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGCT 832 0.12012480273976955 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4438077252376146E-4 0.0 0.0 0.12719946059343384 0.0 2 1.4438077252376146E-4 0.0 0.0 0.9273577019201199 0.0 3 1.4438077252376146E-4 0.0 0.0 1.1346884912642414 0.0 4 1.4438077252376146E-4 0.0 0.0 1.970797544949344 0.0 5 1.4438077252376146E-4 0.0 0.0 4.992542733099148 0.0 6 1.4438077252376146E-4 0.0 0.0 5.949642874159163 0.0 7 1.4438077252376146E-4 0.0 0.0 6.818237601662111 0.0 8 1.4438077252376146E-4 0.0 0.0 7.689286802297964 0.0 9 1.4438077252376146E-4 0.0 0.0 8.038110748715372 0.0 10 1.4438077252376146E-4 0.0 0.0 10.510487097412263 0.0 11 1.4438077252376146E-4 0.0 0.0 11.301838111615 0.0 12 1.4438077252376146E-4 0.0 0.0 13.78605368365884 0.0 13 1.4438077252376146E-4 0.0 0.0 14.12578164140725 0.0 14 1.4438077252376146E-4 0.0 0.0 14.327914722940516 0.0 15 1.4438077252376146E-4 0.0 0.0 14.806392603084262 0.0 16 1.4438077252376146E-4 0.0 0.0 15.2040172506147 0.0 17 1.4438077252376146E-4 0.0 0.0 15.60164189814514 0.0 18 1.4438077252376146E-4 0.0 0.0 15.963748875634733 0.0 19 1.4438077252376146E-4 0.0 0.0 16.704855380999202 0.0 20 1.4438077252376146E-4 0.0 0.0 17.071582543209555 0.0 21 1.4438077252376146E-4 0.0 0.0 17.41982896653687 0.0 22 1.4438077252376146E-4 0.0 0.0 17.854270711060867 0.0 23 1.4438077252376146E-4 0.0 0.0 18.2002070420278 0.0 24 1.4438077252376146E-4 0.0 0.0 18.492578106388414 0.0 25 1.4438077252376146E-4 0.0 0.0 18.76459148182318 0.0 26 1.4438077252376146E-4 0.0 0.0 19.029097057086712 0.0 27 1.4438077252376146E-4 0.0 0.0 19.336194960244754 0.0 28 1.4438077252376146E-4 0.0 0.0 19.611384712675044 0.0 29 1.4438077252376146E-4 0.0 0.0 19.89480416913919 0.0 30 1.4438077252376146E-4 0.0 0.0 20.2369866000205 0.0 31 1.4438077252376146E-4 0.0 0.0 20.530801472106358 0.0 32 1.4438077252376146E-4 0.0 0.0 20.84223079844011 0.0 33 1.4438077252376146E-4 0.0 0.0 21.132291770440347 0.0 34 1.4438077252376146E-4 0.0 0.0 21.441122242868673 0.0 35 1.4438077252376146E-4 0.0 0.0 21.747065099846523 0.0 36 1.4438077252376146E-4 0.0 0.0 22.067157272531702 0.0 37 1.4438077252376146E-4 0.0 0.0 22.39981057242645 0.0 38 1.4438077252376146E-4 0.0 0.0 22.82400128210126 0.0 39 1.4438077252376146E-4 0.0 0.0 23.346082155547183 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 20 7.031342E-4 45.000004 1 GCGCATA 20 7.031342E-4 45.000004 1 GCGATAT 20 7.031342E-4 45.000004 9 TTAACGG 30 2.1642481E-6 45.000004 2 CAATCGA 40 6.8084773E-9 45.000004 41 CGATCGA 40 6.8084773E-9 45.000004 41 TCGACAC 30 2.1642481E-6 45.000004 34 ACCGCGA 25 3.8891954E-5 45.0 30 CCGTCGA 100 0.0 45.0 41 ACGCGTA 25 3.8891954E-5 45.0 40 TACGGCT 1250 0.0 42.84 7 CGTTTTT 3220 0.0 42.6941 1 GTCGAAT 260 0.0 42.403843 43 CGATGAA 2115 0.0 41.595745 19 GATACCT 1485 0.0 41.515152 5 CGGCGAA 190 0.0 41.44737 31 ACGGCTG 1310 0.0 41.39313 8 CCGATGA 2100 0.0 41.14286 18 CGAATGC 350 0.0 41.142857 45 CCCGTCG 115 0.0 41.08696 40 >>END_MODULE