##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551731_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 553774 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.350422735628612 31.0 31.0 33.0 30.0 34.0 2 31.284903227670494 31.0 31.0 34.0 28.0 34.0 3 31.201611126560653 31.0 31.0 34.0 28.0 34.0 4 35.06002268073257 35.0 35.0 37.0 32.0 37.0 5 35.33438189586366 35.0 35.0 37.0 33.0 37.0 6 35.254751938516435 36.0 35.0 37.0 33.0 37.0 7 35.491547093218536 37.0 35.0 37.0 33.0 37.0 8 34.81556374983296 37.0 35.0 37.0 32.0 37.0 9 36.73191951951518 39.0 37.0 39.0 32.0 39.0 10 36.438489347640015 37.0 35.0 39.0 32.0 39.0 11 36.78118871597439 39.0 35.0 39.0 33.0 39.0 12 36.88776829536959 39.0 37.0 39.0 33.0 39.0 13 36.81254627338951 39.0 37.0 39.0 32.0 39.0 14 37.89175006410557 40.0 37.0 41.0 33.0 41.0 15 37.83563330889496 40.0 37.0 41.0 33.0 41.0 16 38.09011076720828 40.0 37.0 41.0 33.0 41.0 17 37.77282790452423 40.0 37.0 41.0 32.0 41.0 18 37.77147175562594 39.0 37.0 41.0 33.0 41.0 19 37.70830699888402 39.0 37.0 41.0 33.0 41.0 20 37.43384304788596 39.0 35.0 41.0 32.0 41.0 21 37.51736809601029 39.0 36.0 41.0 33.0 41.0 22 37.6336032388664 39.0 36.0 41.0 33.0 41.0 23 37.60946162152791 39.0 36.0 41.0 33.0 41.0 24 37.485100420026946 39.0 35.0 41.0 32.0 41.0 25 37.26507745036784 39.0 35.0 41.0 32.0 41.0 26 37.32880922542409 39.0 35.0 41.0 32.0 41.0 27 37.31768735982549 39.0 35.0 41.0 32.0 41.0 28 37.19180026509009 39.0 35.0 41.0 32.0 41.0 29 37.202875180127634 39.0 35.0 41.0 32.0 41.0 30 36.965301729586436 39.0 35.0 41.0 31.0 41.0 31 36.9810717007299 39.0 35.0 41.0 31.0 41.0 32 36.690330351370775 39.0 35.0 41.0 30.0 41.0 33 36.56489651012868 39.0 35.0 41.0 30.0 41.0 34 36.37826441833672 39.0 35.0 41.0 30.0 41.0 35 36.24510359821877 39.0 35.0 41.0 30.0 41.0 36 36.16657336747482 39.0 35.0 41.0 29.0 41.0 37 36.04281349431356 39.0 35.0 41.0 29.0 41.0 38 35.92376673516633 39.0 35.0 41.0 28.0 41.0 39 35.8342085399459 39.0 35.0 40.0 28.0 41.0 40 35.79395565700087 39.0 35.0 40.0 27.0 41.0 41 35.68575086587669 39.0 35.0 40.0 26.0 41.0 42 35.81119554186365 39.0 35.0 40.0 28.0 41.0 43 35.78999194617299 39.0 35.0 41.0 28.0 41.0 44 36.00119904509782 39.0 35.0 41.0 29.0 41.0 45 36.00124238407726 39.0 35.0 41.0 29.0 41.0 46 35.869560506632666 39.0 35.0 40.0 28.0 41.0 47 35.575306894148156 39.0 35.0 40.0 26.0 41.0 48 35.537502663541446 39.0 35.0 40.0 26.0 41.0 49 35.72040579731082 39.0 35.0 40.0 28.0 41.0 50 35.62104396378306 39.0 35.0 40.0 27.0 41.0 51 34.84952164601444 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 15.0 9 22.0 10 21.0 11 20.0 12 20.0 13 19.0 14 12.0 15 30.0 16 35.0 17 73.0 18 170.0 19 394.0 20 964.0 21 1964.0 22 2954.0 23 3652.0 24 4293.0 25 5556.0 26 6871.0 27 7592.0 28 7586.0 29 8093.0 30 9577.0 31 12210.0 32 15624.0 33 21221.0 34 34483.0 35 38617.0 36 45447.0 37 70478.0 38 125290.0 39 130453.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.41497072813097 15.59390653949084 17.048832195083193 16.942290537294998 2 28.598670215647537 35.53055939787711 20.33464915290353 15.536121233571818 3 28.351457453762723 33.80512627895134 24.399303687063675 13.444112580222257 4 25.376778252500117 20.712962327592123 37.64893259705222 16.261326822855533 5 33.46455413219111 23.90253063524109 23.863525553745752 18.769389678822044 6 21.97466836651775 39.76062437023046 25.186267322048344 13.07843994120345 7 64.57327357369613 6.261579633568928 24.008349976705297 5.156796816029644 8 62.6618440013435 16.481994459833796 14.428087992574588 6.4280735462481084 9 57.42775933864718 8.138338022370137 15.27987951763716 19.15402312134553 10 39.627898745697706 21.80275708140866 23.16594856385457 15.403395609039066 11 31.080549104869498 21.811966614539504 28.25141664289042 18.856067637700576 12 24.27849628187672 20.293115964274236 30.764535713124847 24.663852040724194 13 24.445351352717896 21.4934251156609 36.714255273812064 17.34696825780914 14 20.20770205896268 29.531902906239733 28.45095652739204 21.80943850740555 15 16.591244803836943 24.078956397375105 38.80337466186567 20.526424136922284 16 18.45518207788737 26.03083568387104 28.757940965086842 26.75604127315475 17 18.871958596828307 28.288796512656788 32.76733830046192 20.071906590052983 18 18.431706797357766 25.808542835163806 31.755192551474064 24.00455781600436 19 19.298486386143086 26.748456951752882 29.093456897579156 24.85959976452488 20 22.47108026017834 26.135390971768267 35.192695937331834 16.200832830721556 21 20.999721908215268 31.73225900818746 29.612441176364367 17.655577907232914 22 19.08793117770065 23.053447796393474 33.43620321647459 24.422417809431284 23 20.972635046065726 28.547385756644406 31.4817958228447 18.998183374445173 24 21.071411803371053 25.020856883855146 29.269340922470178 24.638390390303623 25 18.144224900410638 33.91690473008845 27.22970020260973 20.709170166891187 26 18.309815917684833 26.091329676005014 32.20284809326549 23.39600631304467 27 23.363863236627218 28.306673841675483 27.343645602718798 20.9858173189785 28 17.49233441801168 27.963573587781298 33.20740952085146 21.336682473355555 29 20.96523130374485 26.71378576820147 29.995088248996883 22.3258946790568 30 18.372838016952763 33.653801009075906 29.442335682065245 18.531025291906083 31 24.202472488777012 24.444267878231916 25.610989320553152 25.742270312437928 32 23.0166096638701 29.720427466800537 28.06090571243865 19.202057156890717 33 21.58497870972635 27.446575678887054 25.289558556378594 25.678887055007998 34 22.177458674477315 26.731843676301164 26.40553727693969 24.685160372281835 35 20.435592859180822 27.686384698450993 25.48115296131635 26.396869481051837 36 24.40147063603564 31.27864435672314 24.16581493533463 20.15407007190659 37 19.38841476847956 28.126455918840538 31.319094070866456 21.166035241813447 38 22.841809113465057 28.07824130421435 24.720915030319226 24.359034552001358 39 22.376276242654946 24.852557180366 30.052692975834905 22.718473601144147 40 18.830967145442003 27.5737033519089 28.45709621614594 25.13823328650316 41 21.72095475771705 26.33583375167487 24.729943984369072 27.21326750623901 42 20.2951023341652 23.643580233091477 31.12099881901281 24.94031861373051 43 25.777483233232328 25.723309508933244 25.48819554547523 23.011011712359196 44 21.692062104757536 24.643085446409547 29.578672888217937 24.08617956061498 45 20.263139836828742 22.737073246486833 28.32744043599013 28.672346480694287 46 25.841408227905248 26.737622206893064 26.68399021983697 20.736979345364716 47 18.120930198962032 25.185003268481367 35.47006540574314 21.224001126813466 48 21.228154445676395 25.82172510807658 27.144105718217176 25.806014728029847 49 19.768714313059117 22.202739745816885 34.9055751985467 23.122970742577298 50 22.00193580774829 22.51839197939954 30.057388031940828 25.422284180911348 51 20.10152155933648 22.2079765391658 28.011607623326483 29.678894278171242 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 424.5 2 742.0 3 4572.0 4 8402.0 5 5726.0 6 3050.0 7 2860.0 8 2670.0 9 2658.0 10 2646.0 11 2535.0 12 2424.0 13 2326.0 14 2228.0 15 2083.5 16 1939.0 17 1851.0 18 1763.0 19 1812.0 20 1861.0 21 2328.0 22 2795.0 23 2593.5 24 2392.0 25 2821.5 26 4154.0 27 5057.0 28 6121.0 29 7185.0 30 8339.0 31 9493.0 32 10366.0 33 11239.0 34 12525.5 35 13812.0 36 14767.0 37 15722.0 38 17080.5 39 18439.0 40 20947.0 41 23455.0 42 24997.5 43 26540.0 44 28773.0 45 31006.0 46 65335.5 47 99665.0 48 75781.5 49 51898.0 50 50128.0 51 48358.0 52 41471.0 53 34584.0 54 30261.5 55 25939.0 56 23691.5 57 21444.0 58 19903.5 59 18363.0 60 17429.0 61 16495.0 62 14635.5 63 12776.0 64 10998.0 65 9220.0 66 7450.0 67 5680.0 68 4834.0 69 3988.0 70 3366.0 71 2744.0 72 2355.0 73 1966.0 74 1557.5 75 897.0 76 645.0 77 489.5 78 334.0 79 260.5 80 187.0 81 141.0 82 95.0 83 54.5 84 14.0 85 10.0 86 6.0 87 4.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 553774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.4776499816933 #Duplication Level Percentage of deduplicated Percentage of total 1 73.66162657603911 23.92356525018795 2 9.223643028816934 5.991244996920036 3 3.3291638164361967 3.243702514857991 4 1.838918801116911 2.388950446697204 5 1.3487166283922285 2.1901573290706153 6 1.1105243071410005 2.164033184609272 7 0.9541219066478954 2.169134612678334 8 0.8506491668503017 2.2101668718546494 9 0.7699892974196123 2.2506698602119695 >10 6.776896772285132 35.10804231674516 >50 0.08156154746001171 1.7905660558614078 >100 0.04357397741014299 2.4059880906655207 >500 0.0039104851521923195 0.8766861061832286 >1k 0.005027766624247268 4.994861031296416 >5k 0.0 0.0 >10k+ 0.0016759222080824226 8.292231332160242 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 16743 3.023435553131783 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 15692 2.833646939003998 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 13269 2.39610382574841 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 4906 0.8859209713709925 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4703 0.8492634179286135 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 3594 0.6490012171030058 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 3178 0.5738803194082784 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 3132 0.5655736816824192 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 2856 0.5157338553272635 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 2761 0.49857884263255403 No Hit CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT 1368 0.24703218280381528 No Hit CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 1032 0.1863576115888431 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATG 882 0.15927074943930197 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 748 0.13507315258571187 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGT 731 0.13200330820876388 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTAT 700 0.12640535669785868 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCC 647 0.11683466540502081 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAAGTACCG 594 0.10726397411218296 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25389418788169904 0.0 2 0.0 0.0 0.0 1.4948336324926774 0.0 3 0.0 0.0 0.0 1.801998649268474 0.0 4 0.0 0.0 0.0 2.715187061870005 0.0 5 0.0 0.0 0.0 6.143480914596929 0.0 6 0.0 0.0 0.0 6.993827807011525 0.0 7 0.0 0.0 0.0 8.288760396840589 0.0 8 0.0 0.0 0.0 9.632991075781817 0.0 9 0.0 0.0 0.0 9.962728477682232 0.0 10 0.0 0.0 0.0 13.556613347683351 0.0 11 0.0 0.0 0.0 14.647852734147865 0.0 12 0.0 0.0 0.0 18.67639145210862 0.0 13 0.0 0.0 0.0 19.228241123635275 0.0 14 0.0 0.0 0.0 19.51897344404035 0.0 15 0.0 0.0 0.0 20.420243637296082 0.0 16 0.0 0.0 0.0 21.109513989461405 0.0 17 0.0 0.0 0.0 21.8121471936205 0.0 18 0.0 0.0 0.0 22.448327295972724 0.0 19 0.0 0.0 0.0 23.57496018231264 0.0 20 0.0 0.0 0.0 24.14522892010098 0.0 21 0.0 0.0 0.0 24.72922166804509 0.0 22 0.0 0.0 0.0 25.383459678497005 0.0 23 0.0 0.0 0.0 25.95571478617631 0.0 24 0.0 0.0 0.0 26.447973360973972 0.0 25 0.0 0.0 0.0 26.889308634930494 0.0 26 0.0 0.0 0.0 27.284054505989808 0.0 27 0.0 0.0 0.0 27.719791828435426 0.0 28 0.0 0.0 0.0 28.13097039586546 0.0 29 0.0 0.0 0.0 28.531675376597672 0.0 30 0.0 0.0 0.0 28.986012344385976 0.0 31 0.0 0.0 0.0 29.41849924337365 0.0 32 0.0 0.0 0.0 29.86200146630214 0.0 33 0.0 0.0 0.0 30.262525867953354 0.0 34 0.0 0.0 0.0 30.696457399589 0.0 35 0.0 0.0 0.0 31.122443451660786 0.0 36 0.0 0.0 0.0 31.53940054968272 0.0 37 0.0 0.0 0.0 31.960691545648586 0.0 38 0.0 0.0 0.0 32.37150895491663 0.0 39 0.0 0.0 0.0 32.823859552813964 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 45 3.8380676E-10 45.000004 4 GATTGCG 45 3.8380676E-10 45.000004 1 CTCACGT 20 7.030118E-4 45.0 45 GGTACGA 20 7.030118E-4 45.0 8 AGATCGC 20 7.030118E-4 45.0 29 CGACGGT 20 7.030118E-4 45.0 28 TTTCGCG 25 3.8881783E-5 45.0 1 TAACGCC 25 3.8881783E-5 45.0 12 TCGAATA 20 7.030118E-4 45.0 44 ATACCGG 20 7.030118E-4 45.0 2 CGTTTTT 2650 0.0 43.556606 1 TACGGCT 1860 0.0 43.306454 7 ACGGCTG 1875 0.0 42.960003 8 CGGCTGT 1900 0.0 42.631577 9 CGATGAA 1110 0.0 42.567566 19 GTCGAAT 155 0.0 42.096775 43 CGCGCAA 65 0.0 41.53846 41 TGATACC 1775 0.0 41.450703 4 GATACCT 1775 0.0 41.450703 5 CCGATGA 1125 0.0 41.4 18 >>END_MODULE