##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551708_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 167195 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.41745865606029 31.0 31.0 33.0 28.0 34.0 2 31.37095008822034 31.0 31.0 34.0 28.0 34.0 3 31.237261879840904 31.0 31.0 34.0 28.0 34.0 4 34.98818146475672 35.0 35.0 37.0 32.0 37.0 5 35.370064894285115 37.0 35.0 37.0 33.0 37.0 6 35.318657854600914 37.0 35.0 37.0 33.0 37.0 7 35.55709201830198 37.0 35.0 37.0 33.0 37.0 8 35.13481862495888 37.0 35.0 37.0 32.0 37.0 9 37.0778252938186 39.0 37.0 39.0 33.0 39.0 10 36.69582822452825 38.0 35.0 39.0 32.0 39.0 11 36.93739645324322 39.0 37.0 39.0 33.0 39.0 12 36.94236669756871 39.0 37.0 39.0 33.0 39.0 13 36.94577589042734 39.0 37.0 39.0 33.0 39.0 14 37.8886569574449 40.0 37.0 41.0 33.0 41.0 15 38.14763001285924 40.0 37.0 41.0 33.0 41.0 16 38.09583420556835 40.0 37.0 41.0 34.0 41.0 17 38.047441610095994 40.0 37.0 41.0 34.0 41.0 18 37.980968330392656 39.0 37.0 41.0 34.0 41.0 19 37.85441550285595 39.0 37.0 41.0 34.0 41.0 20 37.86031280839738 39.0 36.0 41.0 34.0 41.0 21 37.57884506115614 39.0 35.0 41.0 33.0 41.0 22 37.75866503184904 39.0 35.0 41.0 33.0 41.0 23 37.84684350608571 39.0 35.0 41.0 34.0 41.0 24 37.74036903017435 39.0 35.0 41.0 34.0 41.0 25 37.28771195310865 39.0 35.0 41.0 33.0 41.0 26 37.44614372439367 39.0 35.0 41.0 33.0 41.0 27 37.615574628427886 39.0 35.0 41.0 33.0 41.0 28 37.533933431023655 39.0 35.0 41.0 33.0 41.0 29 37.566362630461434 39.0 35.0 41.0 33.0 41.0 30 37.15867699392924 39.0 35.0 41.0 33.0 41.0 31 37.1496396423338 39.0 35.0 41.0 33.0 41.0 32 37.05658662041329 39.0 35.0 41.0 33.0 41.0 33 37.011836478363584 39.0 35.0 41.0 32.0 41.0 34 36.899458715870686 39.0 35.0 41.0 32.0 41.0 35 36.806603068273574 39.0 35.0 41.0 32.0 41.0 36 36.58983223182511 39.0 35.0 41.0 31.0 41.0 37 36.63970812524298 39.0 35.0 41.0 31.0 41.0 38 36.443147223302134 39.0 35.0 41.0 31.0 41.0 39 36.42181883429529 39.0 35.0 41.0 31.0 41.0 40 36.33578157241544 39.0 35.0 41.0 30.0 41.0 41 36.20907323783606 39.0 35.0 41.0 30.0 41.0 42 36.28374652352044 39.0 35.0 41.0 30.0 41.0 43 36.28789736535183 39.0 35.0 41.0 30.0 41.0 44 36.27965549209007 39.0 35.0 41.0 30.0 41.0 45 36.24410418971859 39.0 35.0 41.0 30.0 41.0 46 36.16796554920901 39.0 35.0 41.0 30.0 41.0 47 36.04835670923173 39.0 35.0 41.0 30.0 41.0 48 35.96582433685218 39.0 35.0 41.0 29.0 41.0 49 36.075785759143514 39.0 35.0 41.0 30.0 41.0 50 36.03848201202189 39.0 35.0 41.0 30.0 41.0 51 35.223050928556475 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 11.0 10 13.0 11 10.0 12 14.0 13 6.0 14 10.0 15 17.0 16 11.0 17 30.0 18 53.0 19 99.0 20 152.0 21 245.0 22 390.0 23 569.0 24 864.0 25 1383.0 26 1991.0 27 2250.0 28 2193.0 29 2216.0 30 2429.0 31 3066.0 32 4129.0 33 6155.0 34 11684.0 35 13330.0 36 12728.0 37 20410.0 38 38256.0 39 42469.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.8181165704716 22.721971350817906 23.820090313705553 15.639821765004935 2 35.945452914261786 24.11136696671551 23.42055683483358 16.52262328418912 3 32.75576422739914 21.503633481862497 28.543915786955353 17.196686503783006 4 29.564879332515925 24.326086306408683 27.423666975687073 18.685367385388318 5 25.295014803074256 28.170698884536023 26.557014264780644 19.97727204760908 6 25.37157211639104 32.39092078112384 26.99961123239331 15.237895870091808 7 72.11459672837105 8.404557552558389 14.067406321959389 5.413439397111158 8 71.5912557193696 7.064206465504351 14.650557731989593 6.693980083136457 9 64.94392774903555 9.494303059302013 17.48497263674153 8.0767965549209 10 38.29301115463979 22.454618858219444 24.333263554532135 14.919106432608631 11 29.637848021770985 24.02045515715183 28.089356739136935 18.25234008194025 12 25.80878614791112 23.12688776578247 32.5727444002512 18.491581686055206 13 22.49050509883669 26.391937557941326 33.33293459732648 17.78462274589551 14 18.244564729806516 29.38963485750172 32.21328389006848 20.152516522623284 15 18.072908878854033 26.339902509046325 37.69909387242441 17.88809473967523 16 18.952121773976494 26.27171865187356 34.380812823349984 20.395346750799963 17 19.949161159125573 25.903884685546817 30.2867908729328 23.860163282394808 18 19.873201949819077 26.409880678249948 33.83115523789587 19.885762134035108 19 22.058075899398904 25.97864768683274 31.544005502556892 20.41927091121146 20 22.626274709171927 27.129399802625677 32.04581476718801 18.198510721014387 21 21.943838033434016 27.497831872962706 32.01172283860163 18.546607255001646 22 20.194383803343403 25.678399473668474 31.072101438440146 23.055115284547984 23 19.948563055115283 26.38655462184874 32.547025927808846 21.11785639522713 24 20.81043093393941 25.395496276802536 33.50040372020695 20.293669069051106 25 19.170429737731393 27.436825263913395 31.417207452375965 21.975537545979247 26 17.577080654325787 29.57325278865995 31.447710756900626 21.40195580011364 27 20.989264033015342 28.625257932354437 31.356200843326654 19.029277191303567 28 17.584257902449234 28.194623044947516 32.80959358832501 21.411525464278238 29 19.132749185083288 28.4847034899369 31.28143784204073 21.101109482939084 30 20.595113490235953 30.15161936660785 29.682705822542538 19.570561320613656 31 24.964861389395615 27.53371811357995 27.548670713837137 19.952749783187297 32 23.221388199407876 28.977541194413707 26.935015999282275 20.86605460689614 33 22.24468435060857 28.316038159035855 28.446424833278506 20.992852657077066 34 21.45877568109094 26.306408684470227 29.250874727115043 22.98394090732378 35 21.45399084900864 26.987649152187565 28.38063339214689 23.177726606656897 36 22.040730883100572 29.26463111935165 28.521187834564433 20.173450162983343 37 22.749484135291127 28.33099075929304 28.804091031430367 20.115434073985465 38 21.256616525613804 28.87885403271629 27.516971201291906 22.347558240378003 39 22.691468046293252 26.665869194652952 29.480546667065404 21.1621160919884 40 22.525195131433357 26.229851371153444 29.886659290050538 21.35829420736266 41 19.64532432189958 26.16346182601154 28.532551810759895 25.658662041328988 42 20.042465384730406 27.092915457998146 30.015849756272615 22.848769400998833 43 22.739316367116242 24.893687012171416 29.972188163521636 22.394808457190702 44 21.154938843864947 26.76874308442238 28.88064834474715 23.19566972696552 45 22.31107389575047 26.896737342623883 26.683812314961568 24.108376446664074 46 22.11190526032477 27.30045754956787 28.67729298124944 21.91034420885792 47 20.802057477795387 25.071323903226773 32.11818535243279 22.00843326654505 48 20.06220281706989 25.162833816800738 31.711474625437365 23.063488740692005 49 21.915727144950505 23.625108406351863 33.17862376267232 21.2805406860253 50 20.22249469182691 24.66102455216962 31.731810161787134 23.384670594216335 51 19.850473997428153 24.355393402912767 28.512216274410118 27.28191632524896 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 122.0 1 231.5 2 341.0 3 1727.5 4 3114.0 5 2142.5 6 1171.0 7 1107.0 8 1043.0 9 1003.5 10 964.0 11 897.5 12 831.0 13 782.0 14 733.0 15 731.5 16 730.0 17 728.5 18 727.0 19 694.5 20 662.0 21 892.5 22 1123.0 23 1042.5 24 962.0 25 1157.5 26 1618.0 27 1883.0 28 2196.0 29 2509.0 30 2844.0 31 3179.0 32 3681.0 33 4183.0 34 4278.5 35 4374.0 36 4375.0 37 4376.0 38 5137.0 39 5898.0 40 6876.5 41 7855.0 42 9135.5 43 10416.0 44 10955.0 45 11494.0 46 12985.0 47 14476.0 48 16423.0 49 18370.0 50 17492.5 51 16615.0 52 14075.0 53 11535.0 54 10190.0 55 8845.0 56 7630.0 57 6415.0 58 5652.0 59 4889.0 60 4634.5 61 4380.0 62 4003.5 63 3627.0 64 3243.0 65 2859.0 66 2424.5 67 1990.0 68 1589.5 69 1189.0 70 1011.0 71 833.0 72 693.5 73 554.0 74 412.0 75 230.0 76 190.0 77 136.5 78 83.0 79 53.0 80 23.0 81 15.0 82 7.0 83 3.5 84 0.0 85 0.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 167195.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.52202518017884 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17421351718717 27.08992493794671 2 9.897974223343105 7.229881276353958 3 3.4145063295285194 3.741140584347618 4 1.8227076953310515 2.662759053799456 5 1.1365311235936655 2.0754209156972396 6 0.9105350212076053 1.9952749783187296 7 0.7418567708759806 1.8965878166213104 8 0.6698000425789759 1.9569963216603365 9 0.5518890326384226 1.8140494632016508 >10 6.532597481289816 42.323035975956216 >50 0.10153448078214303 2.454020754209157 >100 0.0393036699801844 2.4946918269086993 >500 0.00491295874752305 1.1094829390831067 >1k 0.0016376529158410168 1.1567331558958103 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1934 1.1567331558958103 No Hit GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 752 0.4497742157361165 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 572 0.3421154938843865 No Hit CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT 531 0.31759322946260354 No Hit TCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 333 0.1991686354257005 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 303 0.18122551511707885 No Hit ACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 298 0.17823499506564192 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 265 0.1584975627261581 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 248 0.14832979455127246 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCC 242 0.14474117048954815 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 232 0.13876013038667423 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 172 0.1028738897694309 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32955530966835134 0.0 2 0.0 0.0 0.0 1.532940578366578 0.0 3 0.0 0.0 0.0 2.1029337001704596 0.0 4 0.0 0.0 0.0 2.9384850025419422 0.0 5 0.0 0.0 0.0 4.854212147492449 0.0 6 0.0 0.0 0.0 5.832710308322618 0.0 7 0.0 0.0 0.0 6.763360148329794 0.0 8 0.0 0.0 0.0 8.191034420885792 0.0 9 0.0 0.0 0.0 8.722150782020993 0.0 10 0.0 0.0 0.0 9.800532312569155 0.0 11 0.0 0.0 0.0 11.542809294536319 0.0 12 0.0 0.0 0.0 12.849068453003978 0.0 13 0.0 0.0 0.0 13.420855886838721 0.0 14 0.0 0.0 0.0 13.663686115015402 0.0 15 0.0 0.0 0.0 14.110469810700081 0.0 16 0.0 0.0 0.0 14.986692185771105 0.0 17 0.0 0.0 0.0 15.994497443105356 0.0 18 0.0 0.0 0.0 17.13209127067197 0.0 19 0.0 0.0 0.0 17.748736505278266 0.0 20 0.0 0.0 0.0 18.380932444152037 0.0 21 0.0 0.0 0.0 19.084900864260295 0.0 22 0.0 0.0 0.0 19.857053141541314 0.0 23 0.0 0.0 0.0 20.59571159424624 0.0 24 0.0 0.0 0.0 21.247046861449206 0.0 25 0.0 0.0 0.0 21.771584078471246 0.0 26 0.0 0.0 0.0 22.243488142587996 0.0 27 0.0 0.0 0.0 22.743503095188252 0.0 28 0.0 0.0 0.0 23.24351804778851 0.0 29 0.0 0.0 0.0 23.70585244774066 0.0 30 0.0 0.0 0.0 24.29079816980173 0.0 31 0.0 0.0 0.0 24.78722449834026 0.0 32 0.0 0.0 0.0 25.286043242919945 0.0 33 0.0 0.0 0.0 25.80220700379796 0.0 34 0.0 0.0 0.0 26.286073148120458 0.0 35 0.0 0.0 0.0 26.841113669667156 0.0 36 0.0 0.0 0.0 27.328568438051377 0.0 37 0.0 0.0 0.0 27.809444062322438 0.0 38 0.0 0.0 0.0 28.26280690212028 0.0 39 0.0 0.0 0.0 28.808875863512664 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCA 20 7.01598E-4 45.0 35 AAGTAGG 50 2.1827873E-11 45.0 2 CTCAACG 20 7.01598E-4 45.0 1 GGTAACG 20 7.01598E-4 45.0 34 TTAGCAT 20 7.01598E-4 45.0 36 GTCCTCT 20 7.01598E-4 45.0 8 CGGCAGA 20 7.01598E-4 45.0 16 GACCGAG 20 7.01598E-4 45.0 9 TCGGGTA 20 7.01598E-4 45.0 27 ATAGCGG 25 3.8764658E-5 45.0 2 GCGTTTT 20 7.01598E-4 45.0 9 TAACGGT 20 7.01598E-4 45.0 36 CGACAGG 40 6.7557266E-9 45.0 2 CGCTGGT 20 7.01598E-4 45.0 12 ACGGGCC 35 1.2036071E-7 45.0 5 CGTTAGG 25 3.8764658E-5 45.0 2 ATTCCTC 20 7.01598E-4 45.0 11 AACGGTA 20 7.01598E-4 45.0 37 AATGCGG 20 7.01598E-4 45.0 2 CTAAAGG 25 3.8764658E-5 45.0 2 >>END_MODULE