SRR3551703_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551703_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	966950
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC	6181	0.6392264336315218	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4931	0.5099539790061534	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC	4715	0.48761569884688977	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG	4257	0.44025027147215473	No Hit
GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	3118	0.322457210817519	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTT	1683	0.17405243290759606	No Hit
GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT	1491	0.15419618387713946	No Hit
CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT	1177	0.12172294327524691	No Hit
CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	1141	0.1179998965820363	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGACC	20	7.03273E-4	45.000004	13
CGTACTC	20	7.03273E-4	45.000004	40
TATCGCG	25	3.8903458E-5	45.0	32
TATAGCG	30	2.165143E-6	44.999996	1
CGTTTTT	2465	0.0	40.801216	1
ATAACGG	50	1.0804797E-9	40.5	2
CGGTCTA	100	0.0	38.25	31
GTTAGCG	65	9.094947E-12	38.07692	1
TATTACG	30	1.139788E-4	37.499996	1
TACGGCT	525	0.0	37.285717	7
CGAATAT	115	0.0	37.173912	14
TTACACG	540	0.0	37.083332	34
ACAACGA	280	0.0	36.964283	13
TCACGAC	105	0.0	36.42857	25
CTATACG	25	0.0021069439	36.0	1
CGGTTAC	25	0.0021069439	36.0	45
CCTCGCA	25	0.0021069439	36.0	43
CTACGAA	125	0.0	36.0	11
TTGCGCA	25	0.0021069439	36.0	19
CTACCGT	25	0.0021069439	36.0	20