##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551703_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 966950 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329728527845287 31.0 31.0 33.0 28.0 34.0 2 31.30821655721599 31.0 31.0 34.0 28.0 34.0 3 31.16126687005533 31.0 31.0 34.0 28.0 34.0 4 34.97292310874399 35.0 35.0 37.0 32.0 37.0 5 35.314159987589846 35.0 35.0 37.0 33.0 37.0 6 35.23150524846166 37.0 35.0 37.0 33.0 37.0 7 35.60185635244842 37.0 35.0 37.0 35.0 37.0 8 35.18792388437872 37.0 35.0 37.0 32.0 37.0 9 37.11301928745023 39.0 37.0 39.0 33.0 39.0 10 36.56238998914112 38.0 35.0 39.0 32.0 39.0 11 36.78150473137184 39.0 37.0 39.0 33.0 39.0 12 36.84185945498733 39.0 35.0 39.0 33.0 39.0 13 36.883674440250275 39.0 37.0 39.0 33.0 39.0 14 37.79478876880914 40.0 37.0 41.0 33.0 41.0 15 37.960467449195924 40.0 37.0 41.0 33.0 41.0 16 37.997352500129274 40.0 37.0 41.0 33.0 41.0 17 37.86643983659962 40.0 37.0 41.0 33.0 41.0 18 37.83081958736233 39.0 37.0 41.0 33.0 41.0 19 37.775392729717154 39.0 37.0 41.0 33.0 41.0 20 37.79682300015513 39.0 36.0 41.0 33.0 41.0 21 37.54473240601892 39.0 36.0 41.0 33.0 41.0 22 37.73863178034024 39.0 36.0 41.0 33.0 41.0 23 37.81391902373442 40.0 36.0 41.0 33.0 41.0 24 37.72980815967733 40.0 36.0 41.0 33.0 41.0 25 37.27148456486892 39.0 35.0 41.0 32.0 41.0 26 37.462828481307206 39.0 35.0 41.0 33.0 41.0 27 37.5739210920937 39.0 36.0 41.0 33.0 41.0 28 37.47473602564766 39.0 35.0 41.0 33.0 41.0 29 37.53972077149801 40.0 36.0 41.0 33.0 41.0 30 37.21986969336574 39.0 35.0 41.0 32.0 41.0 31 37.25575365841046 39.0 35.0 41.0 32.0 41.0 32 37.235350328352034 39.0 35.0 41.0 32.0 41.0 33 37.257237706189564 40.0 35.0 41.0 33.0 41.0 34 37.14312942758157 40.0 35.0 41.0 32.0 41.0 35 37.09476188013858 40.0 35.0 41.0 32.0 41.0 36 36.9229205232949 39.0 35.0 41.0 31.0 41.0 37 36.96832204353896 39.0 35.0 41.0 32.0 41.0 38 36.80794973886964 39.0 35.0 41.0 31.0 41.0 39 36.77745695227261 39.0 35.0 41.0 31.0 41.0 40 36.7069424479032 39.0 35.0 41.0 31.0 41.0 41 36.49807125497699 39.0 35.0 41.0 30.0 41.0 42 36.626993122705414 39.0 35.0 41.0 31.0 41.0 43 36.637130151507314 39.0 35.0 41.0 31.0 41.0 44 36.6972470138063 39.0 35.0 41.0 31.0 41.0 45 36.647502973266455 39.0 35.0 41.0 31.0 41.0 46 36.56347174104142 39.0 35.0 41.0 31.0 41.0 47 36.40910181498526 39.0 35.0 41.0 31.0 41.0 48 36.33468638502508 39.0 35.0 41.0 31.0 41.0 49 36.422618542840894 39.0 35.0 41.0 31.0 41.0 50 36.36676043228709 39.0 35.0 41.0 31.0 41.0 51 35.50147887688092 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 31.0 9 50.0 10 72.0 11 57.0 12 64.0 13 43.0 14 52.0 15 72.0 16 112.0 17 176.0 18 354.0 19 601.0 20 1058.0 21 1675.0 22 2490.0 23 3477.0 24 4905.0 25 6543.0 26 8428.0 27 9438.0 28 10426.0 29 12143.0 30 14626.0 31 18923.0 32 25497.0 33 37868.0 34 67395.0 35 69197.0 36 78730.0 37 121609.0 38 219895.0 39 250893.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.09519623558612 20.384094317182893 21.750452453591187 12.770256993639794 2 33.611458710377995 25.5094885981695 23.456021510936452 17.423031180516055 3 32.90180464346657 25.050312839340194 25.913852836237655 16.13402968095558 4 29.329334505403587 24.49775065928952 27.1219814881845 19.050933347122395 5 27.519933812503233 28.36744402502715 24.29701639174725 19.815605770722375 6 26.741506799731113 34.78339107502973 23.92295361704328 14.552148508195872 7 76.1411655204509 6.819380526397436 12.049330368685041 4.990123584466622 8 76.50126687005533 7.752003723046694 10.454108278607995 5.2926211282899835 9 69.79275040074461 8.355757795129014 12.69838150886809 9.153110295258287 10 41.4398883085992 23.59718703138735 19.938673147525726 15.02425151248772 11 30.987848389265217 25.271834117586224 25.08495785717979 18.655359635968768 12 28.08459589430684 22.974610889911578 28.579140596721654 20.36165261905993 13 26.12182636123895 23.0175293448472 31.169760587414036 19.690883706499818 14 21.05631108123481 26.580691866177155 30.17291483530689 22.190082217281144 15 20.52991364600031 26.513780443663066 32.81121050726511 20.145095403071515 16 24.148404777909924 26.366306427426444 29.402657841667097 20.082630952996535 17 24.055535446507058 27.453746315735046 27.861626764569003 20.629091473188893 18 24.05894823930917 26.49630280779772 28.77491080200631 20.66983815088681 19 24.04571073995553 27.51610734784632 27.36129065618698 21.07689125601117 20 25.557371115362738 27.800299912094733 28.46227829774032 18.180050674802214 21 24.832411189823674 27.73690470034645 29.436165261905995 17.994518847923885 22 23.811365634210663 24.38254304772739 30.05491493872486 21.751176379337092 23 23.49190754434045 26.309323129427582 30.137028801902893 20.061740524329075 24 23.414654325456333 25.5073168209318 29.24628988055225 21.83173897305962 25 22.867986969336574 27.991519726976577 27.22033197166348 21.920161332023373 26 21.72883809917783 26.566730441077613 27.801954599513934 23.902476860230625 27 22.49878483892652 27.4753606701484 28.555147629143185 21.470706861781892 28 19.779823155282074 27.840012410155644 29.251460778737265 23.128703655825017 29 21.377010186669423 26.959822121102434 28.226485340503643 23.436682351724496 30 22.099901752934485 26.862816071151556 29.30492786597032 21.732354309943638 31 22.80479859351569 25.856249030456592 28.71865142975335 22.62030094627437 32 23.268317906820414 26.633745281555406 28.31066756295569 21.787269248668494 33 23.18909974662599 25.73545684885465 27.478980298877914 23.596463105641448 34 20.871710016029784 25.17472464967165 30.795284140855266 23.1582811934433 35 21.013392626299186 26.183256631676922 28.398779668028336 24.404571073995555 36 22.241584363203888 27.794818760018615 27.060758053673922 22.902838823103572 37 21.135736077356636 27.76100108588862 29.352500129272453 21.75076270748229 38 21.335022493407106 26.72568385128497 28.274884947515382 23.664408707792546 39 22.402709550648947 24.127410931278764 29.149180412637676 24.320699105434613 40 22.537566575314134 23.718289466880396 29.970629298309113 23.773514659496357 41 20.696313149594083 25.534412327421276 28.77884068462692 24.990433838357724 42 21.503904028129686 25.418273954185842 29.071823775789856 24.005998241894616 43 22.590619990692385 24.75453746315735 28.826723201820155 23.82811934433011 44 22.06018925487357 24.39660789079063 28.795284140855266 24.747918713480534 45 21.795025595946015 23.6141475774342 28.146336418635915 26.444490407983867 46 21.981798438388747 25.903200785976527 27.814881844976476 24.300118930658254 47 20.211696571694503 25.31516624437665 31.323232845545274 23.14990433838358 48 20.690831997517968 25.116190082217283 30.19525311546616 23.997724804798594 49 21.717462123170794 24.001861523346605 30.661874967681886 23.618801385800715 50 20.265784166709757 24.50860954547805 30.481410621024875 24.744195666787324 51 19.929158694865297 23.584880293707016 29.218470448316875 27.26749056311081 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 245.0 1 848.0 2 1451.0 3 4906.5 4 8362.0 5 5596.5 6 2831.0 7 2692.5 8 2554.0 9 2533.0 10 2512.0 11 2438.0 12 2364.0 13 2359.5 14 2355.0 15 2363.0 16 2371.0 17 2316.0 18 2261.0 19 2368.5 20 2476.0 21 2994.5 22 3513.0 23 3964.0 24 4415.0 25 5353.5 26 7686.0 27 9080.0 28 10812.5 29 12545.0 30 14950.0 31 17355.0 32 19355.5 33 21356.0 34 24358.0 35 27360.0 36 29147.5 37 30935.0 38 34261.0 39 37587.0 40 40165.0 41 42743.0 42 46460.5 43 50178.0 44 53053.5 45 55929.0 46 73367.5 47 90806.0 48 88839.5 49 86873.0 50 85962.5 51 85052.0 52 76701.0 53 68350.0 54 62515.5 55 56681.0 56 53607.5 57 50534.0 58 47707.0 59 44880.0 60 41985.0 61 39090.0 62 35345.5 63 31601.0 64 27636.5 65 23672.0 66 19843.5 67 16015.0 68 12830.5 69 9646.0 70 8048.0 71 6450.0 72 5019.0 73 3588.0 74 2868.5 75 1726.5 76 1304.0 77 978.0 78 652.0 79 432.0 80 212.0 81 222.0 82 232.0 83 138.0 84 44.0 85 37.0 86 30.0 87 19.5 88 9.0 89 8.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 966950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.80007470209633 #Duplication Level Percentage of deduplicated Percentage of total 1 73.13320826247049 22.525082776880595 2 9.265353169987863 5.707471395538624 3 3.246695426944257 2.99995385054513 4 1.7307088388034575 2.132238460908995 5 1.184591354003898 1.8242751097388747 6 0.9206313850931809 1.7013309260378628 7 0.7698408634780913 1.6597809272696087 8 0.6959648751724187 1.7148616116276514 9 0.6131715382330167 1.699715626449861 >10 8.299462216436766 49.5580529690562 >50 0.08442670371716623 1.7625975988566496 >100 0.04848598357149846 2.747073304233192 >500 0.004407816688312031 0.9710050402106288 >1k 0.0027125025774227883 2.351068667483533 >5k 3.3906282217784854E-4 0.6454917351626045 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC 6181 0.6392264336315218 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4931 0.5099539790061534 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC 4715 0.48761569884688977 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG 4257 0.44025027147215473 No Hit GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 3118 0.322457210817519 No Hit GAATGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTT 1683 0.17405243290759606 No Hit GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT 1491 0.15419618387713946 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 1177 0.12172294327524691 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 1141 0.1179998965820363 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0341796370029474E-4 0.0 0.0 0.1258596618232587 0.0 2 1.0341796370029474E-4 0.0 0.0 0.6878328765706603 0.0 3 1.0341796370029474E-4 0.0 0.0 0.9524794456797145 0.0 4 1.0341796370029474E-4 0.0 0.0 1.4561249289001499 0.0 5 1.0341796370029474E-4 0.0 0.0 3.0285950669631316 0.0 6 1.0341796370029474E-4 0.0 0.0 3.9830394539531517 0.0 7 1.0341796370029474E-4 0.0 0.0 4.657221159315373 0.0 8 1.0341796370029474E-4 0.0 0.0 5.541755002843994 0.0 9 1.0341796370029474E-4 0.0 0.0 5.903924711722426 0.0 10 1.0341796370029474E-4 0.0 0.0 7.020631883758209 0.0 11 1.0341796370029474E-4 0.0 0.0 8.082320699105434 0.0 12 1.0341796370029474E-4 0.0 0.0 9.311443197683438 0.0 13 1.0341796370029474E-4 0.0 0.0 9.676612027509178 0.0 14 1.0341796370029474E-4 0.0 0.0 9.859248151403898 0.0 15 1.0341796370029474E-4 0.0 0.0 10.209317958529397 0.0 16 1.0341796370029474E-4 0.0 0.0 10.722271058482859 0.0 17 1.0341796370029474E-4 0.0 0.0 11.286933140286468 0.0 18 1.0341796370029474E-4 0.0 0.0 11.884999224365272 0.0 19 1.0341796370029474E-4 0.0 0.0 12.384921660892497 0.0 20 1.0341796370029474E-4 0.0 0.0 12.825999276074254 0.0 21 1.0341796370029474E-4 0.0 0.0 13.376389678887223 0.0 22 1.0341796370029474E-4 0.0 0.0 13.928745023010498 0.0 23 1.0341796370029474E-4 0.0 0.0 14.427323026009617 0.0 24 1.0341796370029474E-4 0.0 0.0 14.863333160970061 0.0 25 1.0341796370029474E-4 0.0 0.0 15.286209214540566 0.0 26 1.0341796370029474E-4 0.0 0.0 15.682610269403796 0.0 27 1.0341796370029474E-4 0.0 0.0 16.078390816484823 0.0 28 1.0341796370029474E-4 0.0 0.0 16.4570039815916 0.0 29 1.0341796370029474E-4 0.0 0.0 16.857748590930246 0.0 30 1.0341796370029474E-4 0.0 0.0 17.36522053880759 0.0 31 1.0341796370029474E-4 0.0 0.0 17.78602823310409 0.0 32 1.0341796370029474E-4 0.0 0.0 18.212317079476705 0.0 33 1.0341796370029474E-4 0.0 0.0 18.64553492941724 0.0 34 1.0341796370029474E-4 0.0 0.0 19.071306685971354 0.0 35 1.0341796370029474E-4 0.0 0.0 19.520761156212835 0.0 36 1.0341796370029474E-4 0.0 0.0 19.945085061275144 0.0 37 1.0341796370029474E-4 0.0 0.0 20.382853301618493 0.0 38 2.0683592740058948E-4 0.0 0.0 20.87367495734009 0.0 39 2.0683592740058948E-4 0.0 0.0 21.55137287346812 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACC 20 7.03273E-4 45.000004 13 CGTACTC 20 7.03273E-4 45.000004 40 TATCGCG 25 3.8903458E-5 45.0 32 TATAGCG 30 2.165143E-6 44.999996 1 CGTTTTT 2465 0.0 40.801216 1 ATAACGG 50 1.0804797E-9 40.5 2 CGGTCTA 100 0.0 38.25 31 GTTAGCG 65 9.094947E-12 38.07692 1 TATTACG 30 1.139788E-4 37.499996 1 TACGGCT 525 0.0 37.285717 7 CGAATAT 115 0.0 37.173912 14 TTACACG 540 0.0 37.083332 34 ACAACGA 280 0.0 36.964283 13 TCACGAC 105 0.0 36.42857 25 CTATACG 25 0.0021069439 36.0 1 CGGTTAC 25 0.0021069439 36.0 45 CCTCGCA 25 0.0021069439 36.0 43 CTACGAA 125 0.0 36.0 11 TTGCGCA 25 0.0021069439 36.0 19 CTACCGT 25 0.0021069439 36.0 20 >>END_MODULE