##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551686_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 203198 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.831140070276284 31.0 31.0 34.0 30.0 34.0 2 31.873561747654996 33.0 31.0 34.0 30.0 34.0 3 31.55714623175425 31.0 31.0 34.0 30.0 34.0 4 35.510472544021106 37.0 35.0 37.0 33.0 37.0 5 35.57011387907361 37.0 35.0 37.0 33.0 37.0 6 35.501186035295625 37.0 35.0 37.0 33.0 37.0 7 30.086708530595775 37.0 35.0 37.0 0.0 37.0 8 31.851932597761788 37.0 32.0 37.0 17.0 37.0 9 35.84279864959301 39.0 34.0 39.0 32.0 39.0 10 36.33143042746484 37.0 35.0 39.0 32.0 39.0 11 36.63144814417465 38.0 35.0 39.0 32.0 39.0 12 36.90404925245327 39.0 37.0 39.0 33.0 39.0 13 36.86552032992451 39.0 37.0 39.0 33.0 39.0 14 38.00621561235839 40.0 37.0 41.0 33.0 41.0 15 38.132988513666476 40.0 37.0 41.0 33.0 41.0 16 38.060625596708626 40.0 37.0 41.0 33.0 41.0 17 37.85974271400309 40.0 37.0 41.0 33.0 41.0 18 37.69566137461983 39.0 36.0 41.0 33.0 41.0 19 37.49874506638845 39.0 36.0 41.0 33.0 41.0 20 37.4921898837587 39.0 35.0 41.0 33.0 41.0 21 37.49025580960443 39.0 35.0 41.0 33.0 41.0 22 37.640961033081034 39.0 35.0 41.0 33.0 41.0 23 37.620744298664356 39.0 35.0 41.0 33.0 41.0 24 37.49365151231803 39.0 35.0 41.0 33.0 41.0 25 37.150838098800186 39.0 35.0 41.0 32.0 41.0 26 37.18837291705627 39.0 35.0 41.0 33.0 41.0 27 37.23796494059981 39.0 35.0 41.0 33.0 41.0 28 37.13873660173821 39.0 35.0 41.0 32.0 41.0 29 37.129204027598696 39.0 35.0 41.0 32.0 41.0 30 36.8853285957539 39.0 35.0 41.0 32.0 41.0 31 36.80931898936013 39.0 35.0 41.0 31.0 41.0 32 36.66218171438695 39.0 35.0 41.0 31.0 41.0 33 36.4309737300564 39.0 35.0 41.0 30.0 41.0 34 36.28325574070611 39.0 35.0 41.0 30.0 41.0 35 36.09570960344098 39.0 35.0 41.0 29.0 41.0 36 35.960831307394756 39.0 35.0 41.0 28.0 41.0 37 35.826489433951124 39.0 35.0 41.0 27.0 41.0 38 35.696842488607174 39.0 35.0 41.0 26.0 41.0 39 35.61686138643097 39.0 35.0 41.0 26.0 41.0 40 35.44338526954005 39.0 35.0 40.0 25.0 41.0 41 35.26107540428548 39.0 35.0 40.0 24.0 41.0 42 35.25507140818315 38.0 35.0 40.0 24.0 41.0 43 35.24814220612408 38.0 35.0 40.0 24.0 41.0 44 35.15702910461717 38.0 35.0 40.0 24.0 41.0 45 35.11303752989695 38.0 35.0 40.0 23.0 41.0 46 34.91314383015581 38.0 34.0 40.0 23.0 41.0 47 34.79351174716287 38.0 34.0 40.0 23.0 41.0 48 34.755780076575554 38.0 34.0 40.0 23.0 41.0 49 34.69434246400063 38.0 34.0 40.0 23.0 41.0 50 34.55570428842804 38.0 34.0 40.0 23.0 41.0 51 32.8101900609258 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 9.0 10 13.0 11 8.0 12 5.0 13 4.0 14 8.0 15 12.0 16 28.0 17 51.0 18 104.0 19 175.0 20 320.0 21 488.0 22 680.0 23 978.0 24 1472.0 25 2286.0 26 3169.0 27 3744.0 28 3902.0 29 3837.0 30 4069.0 31 4985.0 32 6342.0 33 8881.0 34 13925.0 35 17073.0 36 19604.0 37 29721.0 38 39113.0 39 38184.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63773265484897 16.31807399679131 20.112402681128753 19.931790667230977 2 33.39304520713787 27.033730646955185 22.72512524729574 16.84809889861121 3 30.2778570655223 26.154784988041218 28.76258624592762 14.804771700508862 4 26.88609139853739 22.547466018366322 32.49982775421018 18.06661482888611 5 26.29405801238201 26.32752290869005 27.44367562672861 19.93474345219933 6 23.280248821346667 34.72130631207 28.278821641945296 13.719623224638038 7 61.19154716089725 20.9007962676798 14.268841228752253 3.6388153426706955 8 71.75464325436273 9.260917922420496 14.147777045049656 4.836661778167108 9 67.43078179903345 6.989734150926682 15.460289963483891 10.11919408655597 10 38.14210769791041 24.231537711985354 22.846189430998336 14.780165159105895 11 29.360033071191644 23.15721611433183 29.26062264392366 18.22212817055286 12 26.704987253811552 20.387503814013918 33.11056211183181 19.79694682034272 13 23.163613815096607 22.220691148534925 36.90931997362179 17.70637506274668 14 20.970186714436164 26.535202118131085 31.915176330475692 20.579434836957056 15 19.068101063986852 23.55682634671601 38.53581236035788 18.83926022893926 16 21.327473695607242 23.57306666404197 33.70702467543972 21.39243496491107 17 21.922951997559032 21.973641472849142 33.5111566058721 22.59224992371972 18 22.35209007962677 23.044518154706246 33.09629031781809 21.507101447848896 19 22.641463006525655 24.481540172639495 30.904831740469884 21.972165080364963 20 25.025344737645057 23.794033405840608 32.340377365918954 18.840244490595378 21 23.891967440624416 25.695134794633805 31.157294855264322 19.255602909477457 22 22.000216537564345 22.254648175671022 32.33693245012254 23.408202836642094 23 22.01153554660971 26.322601600409453 32.06872114883021 19.59714170415063 24 23.51253457219067 22.56173781238004 31.26753216074961 22.65819545467967 25 20.695085581550998 27.038651955235782 30.704534493449735 21.56172796976348 26 20.842232699140737 23.838817311194006 31.37973798954714 23.93921200011811 27 22.028760125591788 25.80340357680686 31.031309363281135 21.13652693432022 28 19.16406657545842 24.298959635429483 34.42701207689052 22.109961712221576 29 21.238398015728503 23.709386903414405 30.448626462858886 24.60358861799821 30 20.902764790992038 26.761582299038377 31.84726227620351 20.48839063376608 31 22.676896426145927 23.95496018661601 31.055423773856045 22.312719613382022 32 23.208889851278062 25.23745312453863 28.885618952942448 22.668038071240858 33 21.201488203624052 26.11590665262453 28.66612860362799 24.016476540123428 34 21.314678294077698 24.388035315308223 31.576098189942815 22.721188200671268 35 19.80678943690391 25.50172737920649 28.796543273063712 25.894939910825894 36 21.148338074193642 26.505674268447528 29.013572968237877 23.332414689120956 37 20.529729623323064 27.43334087933936 29.494384787251843 22.54254471008573 38 20.602564985875844 27.586393566865812 27.790627860510437 24.020413586747903 39 22.322070099115148 24.3895117077924 29.168594179076567 24.119824014015887 40 21.5784604179175 25.39542712034567 30.383665193555053 22.642447268181773 41 18.97361194499946 26.007637870451482 29.564759495664326 25.45399068888473 42 20.600596462563608 24.452012322955934 30.264569533164696 24.68282168131576 43 22.63112825913641 24.36736582052973 27.786198683057904 25.215307237275958 44 21.187216409610333 24.688235120424416 29.780312798354313 24.344235671610942 45 20.423429364462248 24.304373074538134 28.84772487918188 26.424472681817733 46 23.417061191547162 25.547495546216005 28.02685065797892 23.008592604257917 47 20.050886327621335 24.608509926278803 33.46588056969065 21.874723176409216 48 21.133082018523805 24.61835254283999 29.35068258545852 24.897882853177688 49 19.949015246213055 23.657221035640113 32.80888591423144 23.584877803915393 50 20.51348930599711 23.885569739859644 31.60710243211055 23.9938385220327 51 20.019882085453595 24.09570960344098 28.72518430299511 27.159224008110318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 75.0 1 266.0 2 457.0 3 2541.5 4 4626.0 5 3157.0 6 1688.0 7 1584.0 8 1480.0 9 1451.0 10 1422.0 11 1349.5 12 1277.0 13 1188.5 14 1100.0 15 1054.0 16 1008.0 17 1005.0 18 1002.0 19 937.5 20 873.0 21 899.0 22 925.0 23 945.0 24 965.0 25 1099.5 26 1427.5 27 1621.0 28 1944.5 29 2268.0 30 2664.0 31 3060.0 32 3416.5 33 3773.0 34 4000.0 35 4227.0 36 4831.0 37 5435.0 38 5958.5 39 6482.0 40 7273.5 41 8065.0 42 8927.5 43 9790.0 44 11213.5 45 12637.0 46 17497.0 47 22357.0 48 19433.5 49 16510.0 50 16327.5 51 16145.0 52 14663.0 53 13181.0 54 12242.5 55 11304.0 56 10712.5 57 10121.0 58 9646.0 59 9171.0 60 8617.5 61 8064.0 62 7370.0 63 6676.0 64 5741.5 65 4807.0 66 3911.0 67 3015.0 68 2632.5 69 2250.0 70 1906.0 71 1562.0 72 1289.5 73 1017.0 74 853.5 75 523.5 76 357.0 77 301.0 78 245.0 79 180.0 80 115.0 81 78.5 82 42.0 83 36.0 84 30.0 85 27.0 86 24.0 87 18.0 88 12.0 89 10.0 90 8.0 91 4.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 203198.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.57428714849556 #Duplication Level Percentage of deduplicated Percentage of total 1 73.16333919520017 34.80693707615232 2 9.726905968759699 9.255012352483783 3 4.693286438398676 6.698392700715558 4 3.0567911451329266 5.816986387661296 5 2.142339919313127 5.096014724554376 6 1.6447708699700012 4.694928099686021 7 1.2361642701975795 4.116674376716306 8 1.04375711182373 3.972480044094922 9 0.7696286334953968 3.2953080246852826 >10 2.4785352229233477 15.505565999665352 >50 0.026895624288817626 0.8523705941987617 >100 0.012413365056377365 1.6156655085187845 >500 0.0010344470880314471 0.37205090601285445 >1k 0.0041377883521257885 3.901613204854378 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 2270 1.117136979694682 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2042 1.0049311508971546 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 1861 0.9158554710184156 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 1755 0.8636896032441265 No Hit GCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 756 0.37205090601285445 TruSeq Adapter, Index 22 (95% over 21bp) GAATCTATCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 433 0.21309264854969043 No Hit GAACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 412 0.2027579011604445 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 406 0.1998051161920885 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCT 369 0.18159627555389324 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 308 0.15157629504227405 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTC 284 0.13976515516885007 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 283 0.13927302434079075 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTA 226 0.11122156714140888 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08710715656650164 0.0 2 0.0 0.0 0.0 0.7534522977588362 0.0 3 0.0 0.0 0.0 0.9143790785342375 0.0 4 0.0 0.0 0.0 1.3061152176694653 0.0 5 0.0 0.0 0.0 3.040876386578608 0.0 6 0.0 0.0 0.0 3.4532820204923276 0.0 7 0.0 0.0 0.0 3.948365633520015 0.0 8 0.0 0.0 0.0 4.670321558283054 0.0 9 0.0 0.0 0.0 4.906544355751533 0.0 10 0.0 0.0 0.0 6.526146910894792 0.0 11 0.0 0.0 0.0 7.177728127245347 0.0 12 0.0 0.0 0.0 8.958257463164008 0.0 13 0.0 0.0 0.0 9.28109528637093 0.0 14 0.0 0.0 0.0 9.418399787399482 0.0 15 0.0 0.0 0.0 9.76682841366549 0.0 16 0.0 0.0 0.0 10.15659602948848 0.0 17 0.0 0.0 0.0 10.59754525142964 0.0 18 0.0 0.0 0.0 11.10493213515881 0.0 19 0.0 0.0 0.0 11.423832911741258 0.0 20 0.0 0.0 0.0 11.690075689721356 0.0 21 0.0 0.0 0.0 12.014882036240515 0.0 22 0.0 0.0 0.0 12.364294924162639 0.0 23 0.0 0.0 0.0 12.689101270681798 0.0 24 0.0 0.0 0.0 12.951899132865481 0.0 25 0.0 0.0 0.0 13.214696995049163 0.0 26 0.0 0.0 0.0 13.445506353408991 0.0 27 0.0 0.0 0.0 13.709288477248792 0.0 28 0.0 0.0 0.0 13.977499778541127 0.0 29 0.0 0.0 0.0 14.23291567830392 0.0 30 0.0 0.0 0.0 14.54984793157413 0.0 31 0.0 0.0 0.0 14.815598578726169 0.0 32 0.0 0.0 0.0 15.099558066516403 0.0 33 0.0 0.0 0.0 15.378104115197985 0.0 34 0.0 0.0 0.0 15.642870500693904 0.0 35 0.0 0.0 0.0 15.923877203515783 0.0 36 0.0 0.0 0.0 16.207344560477956 0.0 37 0.0 0.0 0.0 16.480477170050886 0.0 38 0.0 0.0 0.0 16.762468134528884 0.0 39 0.0 0.0 0.0 17.097117097609228 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 35 1.2053351E-7 45.000004 2 TACGGGA 40 6.7666406E-9 45.0 4 ATCACGG 20 7.019566E-4 45.0 2 GTTGTAG 20 7.019566E-4 45.0 1 TACGAAA 25 3.8794366E-5 45.0 20 GGGTTAC 20 7.019566E-4 45.0 7 ATACGAA 25 3.8794366E-5 45.0 19 ACATACG 25 3.8794366E-5 45.0 17 TATCGGG 20 7.019566E-4 45.0 3 AAGGACC 25 3.8794366E-5 45.0 6 TACACGG 25 3.8794366E-5 45.0 2 CGAAAAG 30 2.1566557E-6 44.999996 22 ACGGGAC 30 2.1566557E-6 44.999996 5 CGTTTTA 245 0.0 43.163265 1 CGTTTTT 1100 0.0 42.545456 1 GTAGGGC 45 1.9148501E-8 40.000004 4 AGGCGAT 45 1.9148501E-8 40.000004 7 TAGGGCG 40 3.439509E-7 39.375 5 GGCGACT 40 3.439509E-7 39.375 10 CAATCTT 40 3.439509E-7 39.375 17 >>END_MODULE