##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551685_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 211813 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.173025262849777 31.0 31.0 33.0 28.0 34.0 2 31.211323195460146 31.0 31.0 34.0 28.0 34.0 3 31.200842252364115 31.0 31.0 34.0 28.0 34.0 4 35.13282942973283 37.0 35.0 37.0 32.0 37.0 5 32.901361106258825 35.0 35.0 37.0 28.0 37.0 6 33.918734921841434 35.0 35.0 37.0 28.0 37.0 7 35.09235977017463 37.0 35.0 37.0 32.0 37.0 8 34.48490885828537 36.0 35.0 37.0 31.0 37.0 9 36.17159947689707 39.0 35.0 39.0 31.0 39.0 10 35.892135987876095 37.0 35.0 39.0 31.0 39.0 11 36.26244848049931 37.0 35.0 39.0 32.0 39.0 12 36.38560900416877 38.0 35.0 39.0 32.0 39.0 13 36.3715541538999 39.0 35.0 39.0 32.0 39.0 14 37.31443301402653 39.0 36.0 41.0 32.0 41.0 15 37.52394801074533 39.0 36.0 41.0 32.0 41.0 16 37.66872665983674 39.0 36.0 41.0 33.0 41.0 17 37.48221780532828 39.0 36.0 41.0 32.0 41.0 18 37.44455250622011 39.0 36.0 40.0 32.0 41.0 19 37.276484446186025 39.0 36.0 40.0 32.0 41.0 20 36.99102510233083 39.0 35.0 40.0 31.0 41.0 21 37.09571178350715 39.0 35.0 40.0 32.0 41.0 22 37.18757583340022 39.0 35.0 41.0 32.0 41.0 23 37.08729870215709 39.0 35.0 41.0 31.0 41.0 24 37.06647845033119 39.0 35.0 41.0 32.0 41.0 25 36.848248218947845 39.0 35.0 40.0 31.0 41.0 26 36.846203962929565 39.0 35.0 40.0 31.0 41.0 27 36.63809114643577 39.0 35.0 40.0 31.0 41.0 28 36.558266017666526 39.0 35.0 40.0 30.0 41.0 29 36.686416792170455 39.0 35.0 41.0 31.0 41.0 30 36.31939493798775 39.0 35.0 40.0 30.0 41.0 31 36.2676370194464 38.0 35.0 40.0 30.0 41.0 32 35.861727089460985 39.0 35.0 40.0 27.0 41.0 33 35.74126706103969 39.0 35.0 41.0 26.0 41.0 34 35.59701245910308 39.0 35.0 41.0 25.0 41.0 35 35.32159027066327 39.0 35.0 41.0 23.0 41.0 36 35.142824094838375 39.0 35.0 41.0 23.0 41.0 37 35.08300718086237 39.0 35.0 41.0 22.0 41.0 38 34.946046748783125 39.0 35.0 40.0 21.0 41.0 39 34.820181008719956 39.0 35.0 40.0 21.0 41.0 40 34.74201772318035 38.0 34.0 40.0 21.0 41.0 41 34.65678688276923 38.0 34.0 40.0 21.0 41.0 42 34.70092959355658 38.0 34.0 40.0 21.0 41.0 43 34.649657953005715 38.0 34.0 40.0 20.0 41.0 44 34.79019229225779 38.0 35.0 40.0 21.0 41.0 45 34.79596625325169 38.0 35.0 40.0 21.0 41.0 46 34.64009763328974 38.0 34.0 40.0 20.0 41.0 47 34.547973920392046 38.0 34.0 40.0 20.0 41.0 48 34.58447781769769 38.0 34.0 40.0 20.0 41.0 49 34.52338147328068 38.0 34.0 40.0 20.0 41.0 50 34.39854494294496 38.0 34.0 40.0 20.0 41.0 51 33.69287059812193 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 8.0 10 6.0 11 13.0 12 13.0 13 15.0 14 18.0 15 24.0 16 40.0 17 89.0 18 106.0 19 289.0 20 593.0 21 1172.0 22 1873.0 23 2332.0 24 3051.0 25 3546.0 26 4003.0 27 3858.0 28 3748.0 29 3669.0 30 4136.0 31 4933.0 32 6432.0 33 8756.0 34 14329.0 35 16244.0 36 18516.0 37 26750.0 38 40932.0 39 42312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.48723166189044 15.711028123863974 19.000250220713554 18.80148999353203 2 32.15383380623474 29.771543767379715 21.622374452937258 16.452247973448276 3 29.191787095220782 29.395740582494938 26.798166307072748 14.61430601521153 4 26.06119548847332 21.962296931727515 34.491745077025485 17.484762502773673 5 28.53696420899567 29.888156062186926 23.90693677914009 17.66794294967731 6 22.670468762540544 38.06423590620028 25.656121201248272 13.609174130010906 7 69.7147955980039 5.786235972296318 20.384017978122213 4.114950451577571 8 70.17510728803236 12.19471892660035 12.661640220383074 4.968533564984208 9 64.75995335508208 6.947637774829685 14.094980005948642 14.197428864139594 10 41.696213169163364 23.1482486910624 20.959525619296265 14.196012520477968 11 33.33175961815375 22.277197339162374 27.02383706382517 17.36720597885871 12 25.61032608952236 19.732027779220353 30.441946433882716 24.21569969737457 13 27.97562000443788 21.08321963241161 33.87421924055653 17.066941122593988 14 20.249465330267736 30.09683069499983 29.823004253752128 19.8306997209803 15 18.562600029271103 22.573685278996095 35.39206753126579 23.471647160467015 16 20.65123481561566 22.302691525071644 31.552359864597545 25.493713794715152 17 21.20172038543432 26.31755369122764 31.23887580082431 21.24185012251373 18 21.630400400353142 21.816413534580033 30.730880540854432 25.822305524212396 19 21.93019314206399 23.427268392402734 29.104918017307718 25.537620448225557 20 28.527521917918165 22.545358405763576 30.707746927714542 18.21937274860372 21 23.23983891451422 28.919849112188583 29.360331990954286 18.479979982342915 22 21.547780353424955 21.35326915722831 35.14137470315797 21.95757578618876 23 25.556977144934446 24.989495451176275 30.113826818939348 19.33970058494993 24 21.944356578680253 26.234933644299453 30.179922856481895 21.6407869205384 25 20.12813188992177 29.93489540302059 29.033628719672542 20.9033439873851 26 19.881215978244963 22.892834717415834 34.515822919273134 22.710126385066072 27 25.446030224773743 24.502745346130787 29.723388082884433 20.327836346211043 28 18.547492363547093 28.413742310434202 32.00653406542563 21.032231260593072 29 20.628573317029645 22.628922681799512 33.63485716174173 23.10764683942912 30 20.132853035460524 30.161038274326884 29.998158753239885 19.707949936972707 31 21.66014361724729 23.23747834174484 28.991610524377638 26.110767516630233 32 26.679193439496157 24.381884020338696 27.533720782010544 21.4052017581546 33 24.878548531015564 24.953614745081744 26.82271626387427 23.345120460028422 34 20.519986969638314 24.0542365199492 29.297068640734985 26.1287078696775 35 23.23228508165221 24.293126484210127 27.96004022415999 24.51454820997767 36 20.574752257887855 29.384881947755805 27.080490810290208 22.959874984066133 37 19.942590870248758 26.76228560097822 28.54687861462705 24.748244914145967 38 20.352858417566438 26.453050568189866 26.29111527621062 26.902975738033074 39 21.25270875725286 25.823249753320145 27.66024748244914 25.263794006977854 40 20.62054736961376 24.8242553573199 28.54074112542667 26.014456147639663 41 18.544187561669965 24.7572150906696 27.875059604462425 28.823537743198006 42 20.662093450354792 24.167544012879286 28.536492094441794 26.633870442324124 43 21.59593603792024 24.674595043741412 26.647089649832633 27.08237926850571 44 20.731966404328347 24.559399092595825 30.014682762625522 24.693951740450302 45 20.386850665445465 23.347953147351674 29.170541940296395 27.09465424690647 46 23.634526681554014 25.64431833740139 27.03894472954918 23.682210251495423 47 19.289656442239146 27.73153678008432 31.557553124690173 21.421253652986362 48 20.70505587475745 24.78837465122537 29.594972924230333 24.91159654978684 49 20.58561089262699 23.039190229117192 32.336542138584505 24.038656739671314 50 20.857076761105315 24.495663627822655 30.015626991733274 24.631632619338756 51 19.649879846846037 23.67654487684892 28.914655852095954 27.75891942420909 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 72.0 1 213.5 2 355.0 3 2160.5 4 3966.0 5 2743.5 6 1521.0 7 1404.0 8 1287.0 9 1290.5 10 1294.0 11 1232.0 12 1170.0 13 1130.5 14 1091.0 15 1013.5 16 936.0 17 937.5 18 939.0 19 883.0 20 827.0 21 906.0 22 985.0 23 961.0 24 937.0 25 1071.5 26 1334.0 27 1462.0 28 1841.5 29 2221.0 30 2565.5 31 2910.0 32 3261.5 33 3613.0 34 3830.0 35 4047.0 36 4692.0 37 5337.0 38 5761.5 39 6186.0 40 6981.0 41 7776.0 42 8610.0 43 9444.0 44 10744.0 45 12044.0 46 16683.5 47 21323.0 48 19569.0 49 17815.0 50 17699.0 51 17583.0 52 16237.5 53 14892.0 54 14185.0 55 13478.0 56 13073.0 57 12668.0 58 11798.5 59 10929.0 60 10036.5 61 9144.0 62 8091.0 63 7038.0 64 6201.5 65 5365.0 66 4346.5 67 3328.0 68 2820.5 69 2313.0 70 1934.0 71 1555.0 72 1346.0 73 1137.0 74 918.5 75 560.0 76 420.0 77 343.5 78 267.0 79 188.5 80 110.0 81 89.0 82 68.0 83 47.5 84 27.0 85 22.5 86 18.0 87 12.0 88 6.0 89 3.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 211813.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.23382889624338 #Duplication Level Percentage of deduplicated Percentage of total 1 73.82195041251748 32.65427523334262 2 8.32292700628649 7.363098582239995 3 3.980019852070059 5.281545514203566 4 2.684298720288602 4.749472411986044 5 2.1698526037163925 4.799044440142956 6 1.826176982271888 4.846728010084367 7 1.4526165241800348 4.497835354770482 8 1.272240188701397 4.502084385755359 9 0.9990073964970703 3.9770930018459683 >10 3.412207955770442 20.224915373466217 >50 0.03415409902554086 1.1259932109927153 >100 0.018144365107318584 1.5636434024351669 >500 0.002134631189096304 0.7275285275219179 >1k 0.004269262378192608 3.686742551212626 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 2124 1.0027713124312483 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2025 0.9560319715975883 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 1875 0.8852147885162855 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 1785 0.8427244786675038 No Hit GCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 829 0.3913829651626671 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATCATCCT 712 0.33614556235925086 No Hit GAACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 427 0.20159291450477543 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTA 330 0.15579780277886626 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCT 323 0.1524930009017388 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTC 283 0.1336084187467247 No Hit CCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 274 0.12935938776184652 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCCCCCCTCGAATGC 228 0.10764211828358033 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.442291077507046E-4 0.0 0.0 0.07837101594330849 0.0 2 9.442291077507046E-4 0.0 0.0 0.7176141218905355 0.0 3 9.442291077507046E-4 0.0 0.0 0.8639696335918947 0.0 4 9.442291077507046E-4 0.0 0.0 1.2397728184766752 0.0 5 9.442291077507046E-4 0.0 0.0 2.72032405942978 0.0 6 9.442291077507046E-4 0.0 0.0 3.1990482170593872 0.0 7 9.442291077507046E-4 0.0 0.0 3.6909915821975043 0.0 8 9.442291077507046E-4 0.0 0.0 4.3212645116210995 0.0 9 9.442291077507046E-4 0.0 0.0 4.539853550065388 0.0 10 9.442291077507046E-4 0.0 0.0 5.929758796674425 0.0 11 9.442291077507046E-4 0.0 0.0 6.592135515761544 0.0 12 9.442291077507046E-4 0.0 0.0 8.143503939795952 0.0 13 9.442291077507046E-4 0.0 0.0 8.478705273047453 0.0 14 9.442291077507046E-4 0.0 0.0 8.620811753763933 0.0 15 9.442291077507046E-4 0.0 0.0 8.978202471047576 0.0 16 9.442291077507046E-4 0.0 0.0 9.404521913197017 0.0 17 9.442291077507046E-4 0.0 0.0 9.835562500885215 0.0 18 9.442291077507046E-4 0.0 0.0 10.286431899836176 0.0 19 9.442291077507046E-4 0.0 0.0 10.96061148277018 0.0 20 9.442291077507046E-4 0.0 0.0 11.280705150297669 0.0 21 9.442291077507046E-4 0.0 0.0 11.614962254441417 0.0 22 9.442291077507046E-4 0.0 0.0 11.95394050412392 0.0 23 9.442291077507046E-4 0.0 0.0 12.289141837375421 0.0 24 9.442291077507046E-4 0.0 0.0 12.553525987545617 0.0 25 9.442291077507046E-4 0.0 0.0 12.785334233498416 0.0 26 9.442291077507046E-4 0.0 0.0 13.026584770528721 0.0 27 9.442291077507046E-4 0.0 0.0 13.344317865286833 0.0 28 9.442291077507046E-4 0.0 0.0 13.588873204194266 0.0 29 9.442291077507046E-4 0.0 0.0 13.846175636056334 0.0 30 9.442291077507046E-4 0.0 0.0 14.158715470721816 0.0 31 9.442291077507046E-4 0.0 0.0 14.416962131691633 0.0 32 9.442291077507046E-4 0.0 0.0 14.697398176693593 0.0 33 9.442291077507046E-4 0.0 0.0 14.932983339077394 0.0 34 9.442291077507046E-4 0.0 0.0 15.20256074934022 0.0 35 9.442291077507046E-4 0.0 0.0 15.489134283542558 0.0 36 9.442291077507046E-4 0.0 0.0 15.76532129755964 0.0 37 9.442291077507046E-4 0.0 0.0 16.044340998899973 0.0 38 9.442291077507046E-4 0.0 0.0 16.31863955470155 0.0 39 9.442291077507046E-4 0.0 0.0 16.63778899312129 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGTCC 20 7.020245E-4 45.000004 6 ATCGTGA 20 7.020245E-4 45.000004 30 AAACGAT 20 7.020245E-4 45.000004 16 ACGGCTA 20 7.020245E-4 45.000004 30 CGAATGC 170 0.0 45.000004 45 ATACGGT 20 7.020245E-4 45.000004 28 ACGACCT 20 7.020245E-4 45.000004 23 CGGCGAT 50 2.1827873E-11 45.0 31 AACGATG 25 3.8800004E-5 45.0 17 CCGACGT 25 3.8800004E-5 45.0 44 CGTAAGC 50 2.1827873E-11 45.0 43 GCTACGA 35 1.2056626E-7 45.0 10 AATACGG 55 1.8189894E-12 45.0 5 CCCCTCG 125 0.0 44.999996 40 CCCTCGA 185 0.0 43.783783 41 TCGAATG 185 0.0 43.783783 44 CGTTTTT 1045 0.0 43.708134 1 ACGGGAG 100 0.0 42.75 5 CCGATGA 955 0.0 42.643974 18 CTCGAAT 190 0.0 42.63158 43 >>END_MODULE