SRR3551655_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551655_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	705483
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16279	2.3074971331697576	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTC	6652	0.94290011240526	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCG	4431	0.6280803364503468	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC	3720	0.5272983190239878	No Hit
GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC	2111	0.2992276213601178	No Hit
GAACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCT	2053	0.2910063034828621	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCC	1139	0.16144967348610811	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCT	948	0.13437602323514528	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTT	911	0.12913138941689595	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	844	0.11963434980006606	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGACAGAGT	827	0.11722465318087041	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTC	805	0.11410622226191135	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	725	0.10276647346569655	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGTAC	130	0.0	45.000004	18
ATTACGA	20	7.0314325E-4	45.0	30
ATAACGC	20	7.0314325E-4	45.0	11
CGGTCTA	60	0.0	44.999996	31
CGTTTTT	7295	0.0	43.48869	1
GTCGAAT	50	1.0804797E-9	40.500004	43
CGATGAA	580	0.0	40.344826	19
CCGATGA	565	0.0	40.22124	18
CGGTTCA	45	1.9264917E-8	40.0	41
GATGAAT	620	0.0	39.556454	20
CATATTA	80	0.0	39.375	28
ACGGTCT	75	0.0	39.0	30
TCACGAC	70	0.0	38.57143	25
CTCACGA	70	0.0	38.57143	24
TATTAGT	70	0.0	38.57143	30
TAGTACG	35	6.244858E-6	38.57143	1
GTTTTTT	8400	0.0	38.517857	2
TATCACG	30	1.1394751E-4	37.499996	1
TACGAAT	30	1.1394751E-4	37.499996	12
ATAACGG	30	1.1394751E-4	37.499996	2