##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551655_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 705483 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01641428638252 33.0 31.0 34.0 30.0 34.0 2 32.14613676020542 33.0 31.0 34.0 30.0 34.0 3 32.072845128798285 33.0 31.0 34.0 30.0 34.0 4 35.747595618888056 37.0 35.0 37.0 35.0 37.0 5 35.769410460634774 37.0 35.0 37.0 35.0 37.0 6 35.649309763665464 37.0 35.0 37.0 33.0 37.0 7 35.919896014503536 37.0 35.0 37.0 35.0 37.0 8 35.706941201985025 37.0 35.0 37.0 35.0 37.0 9 37.547385266547884 39.0 37.0 39.0 35.0 39.0 10 37.2953706893008 39.0 37.0 39.0 34.0 39.0 11 37.32884421027863 39.0 37.0 39.0 34.0 39.0 12 37.24381452139882 39.0 37.0 39.0 34.0 39.0 13 37.29888601142763 39.0 37.0 39.0 34.0 39.0 14 38.44269387072403 40.0 38.0 41.0 34.0 41.0 15 38.46647474141829 40.0 38.0 41.0 34.0 41.0 16 38.26943810127246 40.0 38.0 41.0 34.0 41.0 17 38.23765845527107 40.0 37.0 41.0 34.0 41.0 18 37.955358243926504 39.0 37.0 41.0 33.0 41.0 19 37.66811673704398 39.0 37.0 41.0 33.0 41.0 20 37.72477153949847 39.0 35.0 41.0 34.0 41.0 21 37.62741696114577 39.0 35.0 41.0 33.0 41.0 22 37.76565842125182 39.0 35.0 41.0 33.0 41.0 23 37.80178827838516 40.0 35.0 41.0 34.0 41.0 24 37.65857717336917 40.0 35.0 41.0 33.0 41.0 25 37.31562348065084 39.0 35.0 41.0 33.0 41.0 26 37.447819437179916 39.0 35.0 41.0 33.0 41.0 27 37.52891848563325 39.0 35.0 41.0 33.0 41.0 28 37.3726879315306 39.0 35.0 41.0 33.0 41.0 29 37.35284762354302 39.0 35.0 41.0 33.0 41.0 30 37.0530204129653 39.0 35.0 41.0 33.0 41.0 31 36.86713783322915 39.0 35.0 41.0 32.0 41.0 32 36.67980093070988 39.0 35.0 41.0 31.0 41.0 33 36.40014146336623 39.0 35.0 41.0 31.0 41.0 34 36.055595953410645 39.0 35.0 41.0 29.0 41.0 35 35.89885794554936 39.0 35.0 41.0 28.0 41.0 36 35.665949427555304 39.0 35.0 41.0 26.0 41.0 37 35.59868345516476 39.0 35.0 41.0 26.0 41.0 38 35.369363967664704 38.0 35.0 41.0 25.0 41.0 39 35.271157490683684 38.0 35.0 41.0 25.0 41.0 40 35.158349669658946 38.0 35.0 40.0 24.0 41.0 41 34.972448662831 38.0 35.0 40.0 23.0 41.0 42 34.96941244509081 38.0 35.0 40.0 23.0 41.0 43 34.978893892553046 38.0 35.0 40.0 23.0 41.0 44 35.01789128866323 38.0 35.0 40.0 23.0 41.0 45 35.00602282407939 38.0 35.0 40.0 23.0 41.0 46 34.94596751445464 38.0 35.0 40.0 23.0 41.0 47 34.8804677079391 37.0 35.0 40.0 23.0 41.0 48 34.83952696237897 37.0 35.0 40.0 23.0 41.0 49 34.80121562107095 37.0 34.0 40.0 24.0 41.0 50 34.67809855092185 37.0 34.0 40.0 24.0 41.0 51 33.82576334227756 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 19.0 10 19.0 11 22.0 12 28.0 13 27.0 14 44.0 15 51.0 16 97.0 17 158.0 18 312.0 19 552.0 20 1011.0 21 1631.0 22 2163.0 23 3186.0 24 4573.0 25 7236.0 26 11253.0 27 14225.0 28 13938.0 29 12813.0 30 12592.0 31 14071.0 32 17058.0 33 23252.0 34 42192.0 35 54427.0 36 59552.0 37 84233.0 38 139968.0 39 184688.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.04448016465315 17.532102120107783 20.86740573479446 21.5560119804446 2 36.74461326495465 25.35213463683746 22.61599499917078 15.287257099037113 3 29.04166365454589 24.334675676097085 31.657176714392833 14.966483954964188 4 26.176109133742415 22.038518291723545 34.60437742652906 17.180995148004985 5 25.544768619513157 26.242588411060225 29.690155538829426 18.52248743059719 6 24.791809299444495 32.40092248856457 28.954914576254847 13.852353635736083 7 70.0575350504548 5.971795209806615 19.28409330912297 4.686576430615621 8 70.6438000632191 7.551280470259382 16.608763074375997 5.1961563921455225 9 64.31480276633171 7.141915538716029 18.930009652961164 9.61327204199109 10 39.21937169286858 20.994269174452114 24.203134590060994 15.583224542618321 11 29.8205626499859 20.90284244978263 29.93594459398738 19.340650306244093 12 24.61746066170269 18.626529625802466 34.79190852224646 21.964101190248382 13 23.470586817825517 18.80626464422247 37.65675430875017 20.066394229201837 14 20.34847048050768 22.89197613549866 34.87695663821807 21.88259674577559 15 19.7636229363429 20.654785444865436 38.023169941727865 21.558421677063798 16 21.594992366931592 21.028713661420614 34.21811723315799 23.1581767384898 17 21.340131512736665 22.70529552094097 33.86573453931562 22.088838427006745 18 21.734754770844937 21.795705920624595 33.67083260688067 22.79870670164979 19 23.158885472789564 22.975181542290883 31.06198164945151 22.803951335468042 20 24.135521337863565 23.013594941338063 32.362934330097254 20.48794939070112 21 23.47172079270514 24.92094068886139 31.395370264060222 20.211968254373243 22 22.42633770055409 21.089948304920174 32.35315379676052 24.13056019776522 23 23.47172079270514 22.564540889007954 31.796230384006417 22.167507934280486 24 23.42905498785938 22.29380438649833 31.543637479570734 22.733503146071556 25 23.02720263989352 24.649211958332092 30.134531944781095 22.189053456993292 26 21.671960911885897 22.598418388536647 32.484411389076705 23.24520931050075 27 24.782312259827663 21.813849518698536 30.683801027097747 22.720037194376054 28 22.473114164338476 23.7336689898977 31.603171160750858 22.19004568501296 29 23.844940274960557 23.3903580950923 29.814184041288026 22.950517588659118 30 24.042110157154745 24.894859266630096 29.568536732990026 21.494493843225136 31 25.173675340157025 24.255580928243486 27.413700967989307 23.15704276361018 32 25.089477705345132 25.673616515210146 27.162383785293198 22.074521994151524 33 25.09798251694229 25.24199732665422 25.98517611338615 23.674844043017337 34 24.14586885864011 26.856352314655354 26.59638857350213 22.401390253202415 35 25.667237906512273 25.613657593450164 26.03918166702812 22.679922833009442 36 25.02228969372756 29.482921629578602 24.737520252082614 20.757268424611226 37 25.745482173206156 26.724669481759307 26.077595066075297 21.452253278959237 38 23.41473855500416 28.297634386654252 25.726346347112543 22.561280711229045 39 26.04187485736722 24.776925879149463 26.64628346820547 22.534915795277847 40 23.744441751254104 25.65150400505753 28.933085559822135 21.67096868386623 41 23.89469342280395 25.339802660021576 27.39229719213645 23.373206725038024 42 22.682757770208497 25.98928677232478 28.753917528841942 22.574037928624787 43 24.387547254859438 23.56669118887344 28.583679550038767 23.462082006228357 44 24.331698992038078 23.289717824525894 28.390478579923258 23.98810460351277 45 22.837261847556924 23.12288177036158 29.01373952313521 25.026116858946285 46 24.614483977643687 24.43786739014264 28.373327209868982 22.574321422344692 47 22.58070003104256 23.92686996001321 31.07431362626739 22.418116382676835 48 22.484312166274737 23.951817407364885 29.557055237333856 24.006815189026526 49 22.678363617549962 23.347834037106495 31.23562155289355 22.738180792449995 50 22.034407632784912 22.39047574498606 31.20231104080467 24.37280558142436 51 22.08756270526717 23.006082357760572 29.645788771664233 25.260566165308024 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 250.0 1 664.0 2 1078.0 3 12915.0 4 24752.0 5 15951.0 6 7150.0 7 6947.5 8 6745.0 9 6577.5 10 6410.0 11 6068.0 12 5726.0 13 5469.5 14 5213.0 15 4831.5 16 4450.0 17 4027.5 18 3605.0 19 3339.0 20 3073.0 21 2984.0 22 2895.0 23 2943.0 24 2991.0 25 3304.0 26 4077.5 27 4538.0 28 5454.0 29 6370.0 30 7061.0 31 7752.0 32 8384.5 33 9017.0 34 9971.5 35 10926.0 36 11810.5 37 12695.0 38 13645.5 39 14596.0 40 16575.5 41 18555.0 42 21025.5 43 23496.0 44 26752.0 45 30008.0 46 46414.0 47 62820.0 48 59655.0 49 56490.0 50 55843.0 51 55196.0 52 49921.0 53 44646.0 54 41586.5 55 38527.0 56 37956.5 57 37386.0 58 36449.5 59 35513.0 60 35392.5 61 35272.0 62 33141.5 63 31011.0 64 28629.0 65 26247.0 66 22900.5 67 19554.0 68 17626.5 69 15699.0 70 13611.5 71 11524.0 72 9796.5 73 8069.0 74 6596.5 75 4188.0 76 3252.0 77 2473.0 78 1694.0 79 1286.0 80 878.0 81 624.5 82 371.0 83 283.0 84 195.0 85 123.5 86 52.0 87 47.0 88 42.0 89 26.0 90 10.0 91 6.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 705483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.720978990787 #Duplication Level Percentage of deduplicated Percentage of total 1 70.1979702325907 25.77738190106855 2 8.31821255473434 6.1090581692660075 3 4.264327529396031 4.697708448503589 4 3.1376210754880187 4.608660703761843 5 2.4599238644327293 4.516540627238492 6 2.0148902886677895 4.439324637534639 7 1.702418141359413 4.376012256167558 8 1.4398246672172366 4.229741708424084 9 1.1669081267188213 3.8565007924878416 >10 5.2067214931170245 27.176349023973295 >50 0.052381164896800995 1.3645363781378932 >100 0.02987666326344668 2.0739470540670553 >500 0.006208137820975874 1.590083067009358 >1k 0.0019400430690549603 1.916933475227948 >5k 3.880086138109921E-4 0.9477806954969757 >10k+ 3.880086138109921E-4 2.319441061634887 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16279 2.3074971331697576 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTC 6652 0.94290011240526 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCG 4431 0.6280803364503468 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC 3720 0.5272983190239878 No Hit GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 2111 0.2992276213601178 No Hit GAACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCT 2053 0.2910063034828621 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCC 1139 0.16144967348610811 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCT 948 0.13437602323514528 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTT 911 0.12913138941689595 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 844 0.11963434980006606 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGACAGAGT 827 0.11722465318087041 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTC 805 0.11410622226191135 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 725 0.10276647346569655 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09879756138702138 0.0 2 0.0 0.0 0.0 0.5373623460806285 0.0 3 0.0 0.0 0.0 0.7966173529340891 0.0 4 0.0 0.0 0.0 1.3769289975803811 0.0 5 0.0 0.0 0.0 3.0326740686876934 0.0 6 0.0 0.0 0.0 4.232135997607313 0.0 7 0.0 0.0 0.0 5.20026705108415 0.0 8 0.0 0.0 0.0 6.5936386844190435 0.0 9 0.0 0.0 0.0 7.429803411279932 0.0 10 0.0 0.0 0.0 9.142247226368317 0.0 11 0.0 0.0 0.0 10.139011145555598 0.0 12 0.0 0.0 0.0 11.427490102525503 0.0 13 0.0 0.0 0.0 11.83217738769042 0.0 14 0.0 0.0 0.0 12.068469403231544 0.0 15 0.0 0.0 0.0 12.376343583048776 0.0 16 0.0 0.0 0.0 12.715827312635456 0.0 17 0.0 0.0 0.0 13.07657307121504 0.0 18 0.0 0.0 0.0 13.499262207593945 0.0 19 0.0 0.0 0.0 13.87007199323017 0.0 20 0.0 0.0 0.0 14.142084217479372 0.0 21 0.0 0.0 0.0 14.416364391487818 0.0 22 0.0 0.0 0.0 14.725372546184671 0.0 23 0.0 0.0 0.0 15.032679738562091 0.0 24 0.0 0.0 0.0 15.293352214015078 0.0 25 0.0 0.0 0.0 15.532195673035353 0.0 26 0.0 0.0 0.0 15.749210115622914 0.0 27 0.0 0.0 0.0 15.990038030682525 0.0 28 1.417468599526849E-4 0.0 0.0 16.216974753466772 0.0 29 1.417468599526849E-4 0.0 0.0 16.446746413450075 0.0 30 1.417468599526849E-4 0.0 0.0 16.734067298574168 0.0 31 1.417468599526849E-4 0.0 0.0 16.96483118657714 0.0 32 1.417468599526849E-4 0.0 0.0 17.2213930030915 0.0 33 1.417468599526849E-4 0.0 0.0 17.456551043753002 0.0 34 1.417468599526849E-4 0.0 0.0 17.69185083127446 0.0 35 1.417468599526849E-4 0.0 0.0 17.920488516378143 0.0 36 1.417468599526849E-4 0.0 0.0 18.165852330956238 0.0 37 1.417468599526849E-4 0.0 0.0 18.41943746341159 0.0 38 1.417468599526849E-4 0.0 0.0 18.696836068338996 0.0 39 2.834937199053698E-4 0.0 0.0 18.983448219163325 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGTAC 130 0.0 45.000004 18 ATTACGA 20 7.0314325E-4 45.0 30 ATAACGC 20 7.0314325E-4 45.0 11 CGGTCTA 60 0.0 44.999996 31 CGTTTTT 7295 0.0 43.48869 1 GTCGAAT 50 1.0804797E-9 40.500004 43 CGATGAA 580 0.0 40.344826 19 CCGATGA 565 0.0 40.22124 18 CGGTTCA 45 1.9264917E-8 40.0 41 GATGAAT 620 0.0 39.556454 20 CATATTA 80 0.0 39.375 28 ACGGTCT 75 0.0 39.0 30 TCACGAC 70 0.0 38.57143 25 CTCACGA 70 0.0 38.57143 24 TATTAGT 70 0.0 38.57143 30 TAGTACG 35 6.244858E-6 38.57143 1 GTTTTTT 8400 0.0 38.517857 2 TATCACG 30 1.1394751E-4 37.499996 1 TACGAAT 30 1.1394751E-4 37.499996 12 ATAACGG 30 1.1394751E-4 37.499996 2 >>END_MODULE