##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551651_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427956 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04510043088542 33.0 31.0 34.0 30.0 34.0 2 32.147688080083 33.0 31.0 34.0 30.0 34.0 3 32.10857658263934 33.0 31.0 34.0 30.0 34.0 4 35.78590789707353 37.0 35.0 37.0 35.0 37.0 5 35.81192459037845 37.0 35.0 37.0 35.0 37.0 6 35.70728532839825 37.0 35.0 37.0 35.0 37.0 7 35.982201441269666 37.0 35.0 37.0 35.0 37.0 8 35.68428530035798 37.0 35.0 37.0 35.0 37.0 9 37.50774612343325 39.0 37.0 39.0 35.0 39.0 10 37.28919094486349 39.0 37.0 39.0 34.0 39.0 11 37.36318453298937 39.0 37.0 39.0 34.0 39.0 12 37.26543616633486 39.0 37.0 39.0 34.0 39.0 13 37.287361317518624 39.0 37.0 39.0 34.0 39.0 14 38.36229892792717 40.0 38.0 41.0 34.0 41.0 15 38.35696894073222 40.0 38.0 41.0 34.0 41.0 16 38.23184392788043 40.0 37.0 41.0 34.0 41.0 17 38.199721466692836 40.0 37.0 41.0 34.0 41.0 18 38.02836272887867 40.0 37.0 41.0 33.0 41.0 19 37.80797091289759 39.0 37.0 41.0 33.0 41.0 20 37.92515819383301 40.0 36.0 41.0 34.0 41.0 21 37.88818242996943 40.0 36.0 41.0 34.0 41.0 22 38.051823084616174 40.0 36.0 41.0 34.0 41.0 23 38.04604211647926 40.0 36.0 41.0 34.0 41.0 24 37.930013833197805 40.0 36.0 41.0 34.0 41.0 25 37.622596715550195 39.0 35.0 41.0 33.0 41.0 26 37.80093046948752 40.0 36.0 41.0 34.0 41.0 27 37.84941208909327 40.0 36.0 41.0 34.0 41.0 28 37.74251558571442 40.0 36.0 41.0 33.0 41.0 29 37.79276607875576 40.0 36.0 41.0 33.0 41.0 30 37.539796147267474 40.0 35.0 41.0 33.0 41.0 31 37.41064735627027 39.0 35.0 41.0 33.0 41.0 32 37.30831674284272 40.0 35.0 41.0 33.0 41.0 33 37.18988400676705 40.0 35.0 41.0 33.0 41.0 34 36.922342483806744 40.0 35.0 41.0 32.0 41.0 35 36.87478151959547 40.0 35.0 41.0 32.0 41.0 36 36.68559851947396 39.0 35.0 41.0 31.0 41.0 37 36.54894662068063 39.0 35.0 41.0 31.0 41.0 38 36.42276542448289 39.0 35.0 41.0 31.0 41.0 39 36.35210629130098 39.0 35.0 41.0 30.0 41.0 40 36.26482629055324 39.0 35.0 41.0 30.0 41.0 41 36.079543224069766 39.0 35.0 41.0 30.0 41.0 42 36.11913841609885 39.0 35.0 41.0 30.0 41.0 43 36.08474469337969 39.0 35.0 41.0 30.0 41.0 44 36.12952032451934 39.0 35.0 41.0 30.0 41.0 45 36.14825823215471 39.0 35.0 41.0 31.0 41.0 46 36.09806615633383 39.0 35.0 41.0 31.0 41.0 47 35.96876781725224 38.0 35.0 40.0 30.0 41.0 48 35.97705838918019 38.0 35.0 40.0 30.0 41.0 49 35.963458860256665 38.0 35.0 40.0 30.0 41.0 50 35.8108941106095 38.0 35.0 40.0 30.0 41.0 51 34.96764620661937 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 10.0 10 12.0 11 13.0 12 10.0 13 22.0 14 18.0 15 17.0 16 30.0 17 53.0 18 114.0 19 206.0 20 439.0 21 860.0 22 1286.0 23 1601.0 24 2154.0 25 3114.0 26 4201.0 27 5104.0 28 5347.0 29 5181.0 30 5863.0 31 7371.0 32 9487.0 33 13488.0 34 25449.0 35 33802.0 36 34429.0 37 51752.0 38 90713.0 39 125761.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.92424454850499 17.912355475796577 21.905756666573197 15.257643309125237 2 31.601846918842124 29.235248483488956 22.6915851162269 16.471319481442016 3 29.66730224602529 28.098916711063755 27.611249754647677 14.62253128826328 4 27.371271812990123 22.42847395526643 32.849638747908664 17.350615483834787 5 28.598267111572216 26.707652188542745 25.255867425623197 19.43821327426184 6 24.738057183448767 35.10734748432082 25.708250380880276 14.44634495135014 7 71.59240669601547 6.049921019917936 17.033526811167505 5.324145472899083 8 70.44415781061605 10.680303582611296 12.834029666601241 6.041508940171419 9 64.2696912766733 8.214162203591023 14.749880828870257 12.766265690865417 10 39.94592902074045 22.271915804428495 21.317144753198928 16.46501042163213 11 31.32284627391601 22.230556412341457 26.228163642991337 20.2184336707512 12 25.70614736094365 19.615100617820524 31.32892166484405 23.34983035639178 13 24.41793081531746 21.58235893409603 34.985605996878185 19.014104253708325 14 20.779939993831142 27.147417024180054 29.804465879669873 22.26817710231893 15 18.40586415425885 22.367019039340494 37.22532222938807 22.00179457701259 16 19.805073418762674 23.049565843217525 31.25928833805344 25.886072399966352 17 20.572442026750416 23.87722102272196 31.281253212947124 24.269083737580498 18 21.32462215741805 22.693220798399835 31.698585835927055 24.283571208255054 19 22.60162259671555 24.222583630092814 28.628644066212416 24.54714970697922 20 24.173045827141106 24.57612464832833 30.916028750619223 20.334800773911336 21 22.85912570451168 27.779725018459843 28.587284674125378 20.773864602903103 22 21.072960771668114 22.760050098608268 29.118180373683277 27.048808756040337 23 21.591472020488087 26.07464318761742 29.17262522315378 23.16125956874071 24 22.72476609744927 23.903859275252596 28.455495424763296 24.91587920253484 25 20.56706764246792 28.82001888044565 27.65097346456178 22.96194001252465 26 20.095991176663023 24.54738337586107 30.877473385114357 24.47915206236155 27 23.984007701726345 24.37283272112086 28.88661451177224 22.756545065380553 28 20.321715316527865 25.206329622671493 31.620774098271788 22.851180962528858 29 22.056473095364947 23.319219732869733 30.943134340913552 23.68117283085177 30 22.904924805353822 24.779416575535805 30.760171606426827 21.555487012683546 31 25.64375776949032 24.359513594855546 25.94425595154642 24.052472684107713 32 25.376440568656587 27.804260251053847 26.26111095533186 20.558188224957703 33 26.559973455215026 23.682808513024703 25.017525166138576 24.7396928656217 34 23.870911962912075 26.098010075802186 27.903335856957256 22.127742104328483 35 25.91808503677948 23.473207526007347 27.76804157436746 22.840665862845714 36 27.69607155875838 25.32830477899597 26.842712802250702 20.132910859994954 37 23.564572058809784 27.34580190486873 29.1756629186178 19.91396311770369 38 27.358887362252194 26.287749207862493 24.318621540532202 22.03474188935311 39 26.101281440148057 27.00581368178037 25.98234397928759 20.910560898783988 40 26.47982502874127 23.586303264821616 28.592191720644177 21.341679985792933 41 24.388488536204655 25.316621334903587 25.755685163895354 24.539204964996404 42 25.493275009580422 23.347259998691456 29.582013104150896 21.57745188757723 43 27.226397106244566 21.95482713176121 27.860340782697286 22.95843497929694 44 24.18192524465132 23.09723429511445 29.066305881913095 23.654534578321133 45 23.737487031377057 22.013244352223126 27.7991195356532 26.45014908074662 46 26.779622204151828 24.990419575844243 26.695735075568518 21.534223144435412 47 22.038013253698978 23.782117787809963 32.573442129564725 21.606426828926338 48 23.940077951938985 24.227257007729765 27.648169437979604 24.184495602351642 49 23.94218097187561 21.91744011066558 31.67264859004197 22.467730327416838 50 23.818803802260046 21.7807438147847 29.562151249193843 24.838301133761416 51 22.945349521913467 22.128676779855873 26.832898709213097 28.093074989017563 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 243.0 1 468.0 2 693.0 3 3645.0 4 6597.0 5 4385.0 6 2173.0 7 2064.0 8 1955.0 9 1964.0 10 1973.0 11 1958.5 12 1944.0 13 1910.5 14 1877.0 15 1721.5 16 1566.0 17 1521.5 18 1477.0 19 1362.5 20 1248.0 21 1322.0 22 1396.0 23 1446.5 24 1497.0 25 1817.5 26 2609.5 27 3081.0 28 3635.0 29 4189.0 30 4967.5 31 5746.0 32 6395.0 33 7044.0 34 7752.0 35 8460.0 36 8633.5 37 8807.0 38 9104.0 39 9401.0 40 11557.0 41 13713.0 42 15523.0 43 17333.0 44 19585.0 45 21837.0 46 37755.5 47 53674.0 48 47474.0 49 41274.0 50 40773.5 51 40273.0 52 34451.5 53 28630.0 54 25827.0 55 23024.0 56 21574.0 57 20124.0 58 19047.5 59 17971.0 60 17599.0 61 17227.0 62 16084.0 63 14941.0 64 13581.0 65 12221.0 66 10716.5 67 9212.0 68 8045.0 69 6878.0 70 5995.0 71 5112.0 72 4647.5 73 4183.0 74 3672.5 75 2405.0 76 1648.0 77 1339.0 78 1030.0 79 746.5 80 463.0 81 415.0 82 367.0 83 237.5 84 108.0 85 75.0 86 42.0 87 22.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 427956.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.997263536595334 #Duplication Level Percentage of deduplicated Percentage of total 1 73.67511125363218 25.047521733777145 2 9.465666871696712 6.4361354237338615 3 3.4110815646209285 3.4790231669171896 4 1.8403836274980128 2.50272028769941 5 1.256891685759752 2.136543893886493 6 1.0386881317084926 2.118753248761648 7 0.8771611781453008 2.087475581623337 8 0.7547138049113857 2.052656329622318 9 0.7178219660277387 2.1963584296261818 >10 6.836770223713656 39.96564534650725 >50 0.07252482247261574 1.6566789543299247 >100 0.04213346829361486 2.5598096784054585 >500 0.00483498816484105 1.2246039329313336 >1k 0.00483498816484105 3.7597571563113297 >5k 0.0013814251899545856 2.776316835867144 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGC 6049 1.413463066296535 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCG 5774 1.349204123788427 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTC 4942 1.1547916140911683 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4113 0.9610801110394527 No Hit GCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGC 2290 0.5351017394311565 Illumina Single End Adapter 1 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGAGAGGT 1357 0.3170886726672836 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCT 1255 0.29325444671882156 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTA 1032 0.2411462860667919 No Hit GAACTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCT 1022 0.23880959724831524 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTC 917 0.21427436465431024 No Hit CCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGC 913 0.2133396891269196 Illumina Single End Adapter 1 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTCTGCT 867 0.20259092056192693 Illumina Single End Adapter 1 (95% over 24bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 847 0.1979175429249736 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCC 661 0.1544551309013076 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 507 0.11847012309676695 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 503 0.1175354475693763 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 478 0.11169372552318463 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2091336492536616 0.0 2 0.0 0.0 0.0 1.169045415883876 0.0 3 0.0 0.0 0.0 1.5190814008916804 0.0 4 0.0 0.0 0.0 2.2324724971726067 0.0 5 0.0 0.0 0.0 4.648375066595631 0.0 6 0.0 0.0 0.0 5.61482956191758 0.0 7 0.0 0.0 0.0 6.806307190458832 0.0 8 0.0 0.0 0.0 8.424931535017619 0.0 9 0.0 0.0 0.0 9.096028563684117 0.0 10 0.0 0.0 0.0 11.682743085737787 0.0 11 0.0 0.0 0.0 13.313751881034499 0.0 12 0.0 0.0 0.0 16.100720634831617 0.0 13 0.0 0.0 0.0 16.729056258119993 0.0 14 0.0 0.0 0.0 16.9938031012534 0.0 15 0.0 0.0 0.0 17.629382459879054 0.0 16 0.0 0.0 0.0 18.414276234005364 0.0 17 0.0 0.0 0.0 19.31623811793736 0.0 18 0.0 0.0 0.0 20.236192505771623 0.0 19 0.0 0.0 0.0 21.130209647720793 0.0 20 0.0 0.0 0.0 21.708773799175617 0.0 21 0.0 0.0 0.0 22.317481236388787 0.0 22 0.0 0.0 0.0 22.997691351447344 0.0 23 2.3366888184766659E-4 0.0 0.0 23.60920281524269 0.0 24 2.3366888184766659E-4 0.0 0.0 24.11976932207984 0.0 25 2.3366888184766659E-4 0.0 0.0 24.558833151071607 0.0 26 2.3366888184766659E-4 0.0 0.0 24.965417005486547 0.0 27 2.3366888184766659E-4 0.0 0.0 25.42854872930862 0.0 28 2.3366888184766659E-4 0.0 0.0 25.835833590369102 0.0 29 4.6733776369533317E-4 0.0 0.0 26.246389815775455 0.0 30 4.6733776369533317E-4 0.0 0.0 26.72961706343643 0.0 31 4.6733776369533317E-4 0.0 0.0 27.159567806036133 0.0 32 4.6733776369533317E-4 0.0 0.0 27.60470702595594 0.0 33 4.6733776369533317E-4 0.0 0.0 28.002411462860668 0.0 34 4.6733776369533317E-4 0.0 0.0 28.419510416958754 0.0 35 4.6733776369533317E-4 0.0 0.0 28.858807914832365 0.0 36 4.6733776369533317E-4 0.0 0.0 29.25277364962753 0.0 37 4.6733776369533317E-4 0.0 0.0 29.661226855097254 0.0 38 4.6733776369533317E-4 0.0 0.0 30.08323285571414 0.0 39 4.6733776369533317E-4 0.0 0.0 30.49846245875744 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCACCG 40 6.7975634E-9 45.000004 36 TACGACG 20 7.028318E-4 45.000004 1 GGTATCG 20 7.028318E-4 45.000004 1 TATAGCG 20 7.028318E-4 45.000004 1 TGTACCG 20 7.028318E-4 45.000004 1 GTTATCG 20 7.028318E-4 45.000004 1 TCAAACC 20 7.028318E-4 45.000004 15 CAAACGG 35 1.209537E-7 45.0 2 ACGTAGG 25 3.8866878E-5 45.0 2 CGGTCGA 35 1.209537E-7 45.0 41 CGTTTTT 1880 0.0 42.12766 1 CATACGA 65 0.0 41.538464 18 CGAATAT 115 0.0 41.08696 14 GCTACGA 115 0.0 41.08696 10 TACGGCT 730 0.0 40.993153 7 GTCGAAT 55 6.002665E-11 40.909092 43 GGTCGAA 55 6.002665E-11 40.909092 42 AACGGGA 95 0.0 40.263157 4 ACGGCTG 755 0.0 39.63576 8 GAATGAC 165 0.0 39.545452 1 >>END_MODULE