##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551649_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269988 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.948934767471147 33.0 31.0 34.0 30.0 34.0 2 32.03849430345053 33.0 31.0 34.0 30.0 34.0 3 32.016426655999524 33.0 31.0 34.0 30.0 34.0 4 35.69836066788154 37.0 35.0 37.0 33.0 37.0 5 35.69549016993348 37.0 35.0 37.0 35.0 37.0 6 35.577188615790334 37.0 35.0 37.0 33.0 37.0 7 35.85148969583833 37.0 35.0 37.0 35.0 37.0 8 35.52508630013186 37.0 35.0 37.0 33.0 37.0 9 37.270471280205044 39.0 37.0 39.0 34.0 39.0 10 37.0622360993822 39.0 37.0 39.0 34.0 39.0 11 37.17442997466554 39.0 37.0 39.0 34.0 39.0 12 37.063191697408776 39.0 37.0 39.0 34.0 39.0 13 37.07630339126183 39.0 37.0 39.0 33.0 39.0 14 38.13187623153622 40.0 37.0 41.0 33.0 41.0 15 38.14037290546246 40.0 37.0 41.0 33.0 41.0 16 38.00600397054684 40.0 37.0 41.0 33.0 41.0 17 37.93128953879432 40.0 37.0 41.0 33.0 41.0 18 37.78790909225595 39.0 36.0 41.0 33.0 41.0 19 37.62259063365779 39.0 36.0 41.0 33.0 41.0 20 37.7204579462791 39.0 36.0 41.0 33.0 41.0 21 37.69053809798954 39.0 36.0 41.0 33.0 41.0 22 37.82837755752107 40.0 36.0 41.0 33.0 41.0 23 37.8157066239981 40.0 36.0 41.0 33.0 41.0 24 37.72551372653599 40.0 36.0 41.0 33.0 41.0 25 37.4235373424004 39.0 35.0 41.0 33.0 41.0 26 37.563843578233104 39.0 36.0 41.0 33.0 41.0 27 37.564299154036476 40.0 36.0 41.0 33.0 41.0 28 37.39976221165385 40.0 35.0 41.0 33.0 41.0 29 37.47841755929893 40.0 36.0 41.0 33.0 41.0 30 37.24754803917211 39.0 35.0 41.0 32.0 41.0 31 37.129113145769445 39.0 35.0 41.0 32.0 41.0 32 37.042642635969 39.0 35.0 41.0 31.0 41.0 33 36.97929537609079 40.0 35.0 41.0 31.0 41.0 34 36.82595893150807 40.0 35.0 41.0 31.0 41.0 35 36.792620412759085 40.0 35.0 41.0 31.0 41.0 36 36.55927670859445 39.0 35.0 41.0 30.0 41.0 37 36.54483162214617 39.0 35.0 41.0 31.0 41.0 38 36.357041794450126 39.0 35.0 41.0 30.0 41.0 39 36.3153177178245 39.0 35.0 41.0 30.0 41.0 40 36.31252129724284 39.0 35.0 41.0 30.0 41.0 41 36.108038135028224 39.0 35.0 41.0 29.0 41.0 42 36.16222943241922 39.0 35.0 41.0 30.0 41.0 43 36.12380550246677 39.0 35.0 41.0 30.0 41.0 44 36.21313910247863 39.0 35.0 41.0 30.0 41.0 45 36.14516571106864 39.0 35.0 41.0 30.0 41.0 46 36.069695690178825 39.0 35.0 41.0 30.0 41.0 47 35.9392380402092 38.0 35.0 40.0 29.0 41.0 48 35.915088818762314 38.0 35.0 40.0 30.0 41.0 49 35.89876957494407 38.0 35.0 40.0 30.0 41.0 50 35.739203223846985 38.0 35.0 40.0 29.0 41.0 51 34.90435500837074 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 12.0 11 7.0 12 5.0 13 6.0 14 13.0 15 25.0 16 24.0 17 45.0 18 83.0 19 210.0 20 491.0 21 836.0 22 1182.0 23 1557.0 24 1927.0 25 2279.0 26 2629.0 27 2836.0 28 3004.0 29 3368.0 30 3978.0 31 4982.0 32 6530.0 33 9155.0 34 16610.0 35 20669.0 36 20882.0 37 31913.0 38 55895.0 39 78797.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.572440256604 17.957464776212277 21.16538512822792 14.304709838955807 2 29.557980354682428 31.257315139932146 22.628783501488954 16.555921003896472 3 29.4053809798954 30.062447219876436 25.216305909892288 15.315865890335868 4 27.634931922900275 22.503222365438464 32.087352030460615 17.774493681200646 5 30.183934100774852 26.22375809295228 23.774389972887683 19.817917833385188 6 23.92847089500274 37.551298576233016 23.556602515667365 14.963628013096878 7 70.58535934930441 6.191386283834837 17.8982028830911 5.3250514837696485 8 69.63457635154155 12.765382165133266 11.268648976991571 6.331392506333615 9 63.30540616619999 8.434078551639331 13.394299005881743 14.866216276278946 10 40.06659555239492 23.10732328844245 20.142747085055632 16.683334074106998 11 33.38852097130243 21.823932915536986 25.39705468391188 19.39049142924871 12 26.47376920455724 18.873061024934444 30.423203994251597 24.229965776256723 13 25.80299865179193 22.17802272693601 32.853682385883815 19.16529623538824 14 20.432759974517385 28.646087974280338 28.00346682074759 22.917685230454687 15 18.301554143147104 22.81916233314073 36.21494288635051 22.66434063736166 16 19.853104582425885 22.649154777249358 30.11652369734951 27.381216942975247 17 20.694253077914574 24.98036949790361 29.94244188630606 24.382935537875756 18 20.848704386861638 22.477665674029957 30.737292027793828 25.936337911314578 19 22.519519386046788 23.766241462583523 27.5252974206261 26.188941730743586 20 24.829251670444613 24.17477813828763 30.710994562721304 20.284975628546455 21 23.18140065484392 29.020549061439766 27.702342326325613 20.095707957390697 22 21.046120568321555 23.449190334385232 29.735395647213952 25.76929345007926 23 22.423218809724876 26.614145813888022 27.930130228010135 23.032505148376963 24 22.515074744062698 24.926663407262545 27.341955938782466 25.216305909892288 25 20.4183148880691 30.25764108034431 25.682993318221552 23.64105071336504 26 20.922411366431103 24.77073055098745 29.14722135798628 25.15963672459517 27 25.288531342133723 25.42927833829652 26.511919048253997 22.77027127131576 28 19.911255315051037 26.049676281908823 31.126198201401543 22.91287020163859 29 24.981480658399633 22.047646562069424 29.683171103900914 23.28770167563003 30 24.914811028638308 26.77674563313925 27.31936234203002 20.989080996192424 31 24.465531801413395 23.138435782331065 27.505296531697702 24.89073588455783 32 26.80341348504378 25.45113116138495 26.605997303583862 21.139458049987407 33 26.644887920944633 22.455812850941523 26.397469517163724 24.501829710950116 34 24.885920855741738 22.53952027497518 29.028697571743926 23.54586129753915 35 26.452286768300816 21.518734165962933 26.71489103219402 25.31408803354223 36 25.37705379498348 24.34663762833904 29.153147547298396 21.123161029379084 37 23.404003140880334 22.86323836614961 32.84108923359557 20.89166925937449 38 22.579522052831976 24.139591389246927 28.971287612782792 24.3095989451383 39 23.538083174066994 22.778049394787917 32.358845578322 21.325021852823088 40 25.12444997555447 21.378357556632146 28.84980073188438 24.647391735929002 41 20.899447382846645 22.825088522452848 30.209861179015363 26.065602915685144 42 21.569847548779947 22.019497162836867 31.21101678593123 25.19963850245196 43 24.946664296190942 21.455398017689674 29.703542379661318 23.894395306458065 44 23.740684771175015 22.01060787886869 30.469502348252515 23.77920500170378 45 22.620634991184794 21.399099219224556 28.971287612782792 27.008978176807858 46 25.645584248188808 24.2388550602249 28.192734491903344 21.922826199682948 47 21.530586544587166 23.071395765737737 33.22184689689912 22.176170792775977 48 22.05246159088552 23.006948456968455 29.988369853474968 24.952220098671052 49 22.140984043735276 20.706105456538808 33.21851341541105 23.93439708431486 50 22.793235254900218 21.462435367497815 30.64802880128006 25.096300576321912 51 22.212098315480688 21.138717276323394 27.929759841178125 28.719424567017793 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 116.0 1 334.0 2 552.0 3 1436.5 4 2321.0 5 1617.5 6 914.0 7 902.5 8 891.0 9 876.5 10 862.0 11 803.5 12 745.0 13 778.5 14 812.0 15 831.0 16 850.0 17 856.0 18 862.0 19 823.0 20 784.0 21 831.5 22 879.0 23 883.5 24 888.0 25 1020.5 26 1502.5 27 1852.0 28 2210.5 29 2569.0 30 3190.0 31 3811.0 32 4005.0 33 4199.0 34 4835.5 35 5472.0 36 5620.5 37 5769.0 38 6279.5 39 6790.0 40 8228.5 41 9667.0 42 10789.0 43 11911.0 44 13297.5 45 14684.0 46 24437.0 47 34190.0 48 30068.5 49 25947.0 50 26241.0 51 26535.0 52 22701.0 53 18867.0 54 17000.5 55 15134.0 56 14476.5 57 13819.0 58 12648.5 59 11478.0 60 10974.0 61 10470.0 62 10171.0 63 9872.0 64 8707.5 65 7543.0 66 6463.0 67 5383.0 68 4772.0 69 4161.0 70 3576.0 71 2991.0 72 2438.0 73 1885.0 74 1495.5 75 886.5 76 667.0 77 514.0 78 361.0 79 242.5 80 124.0 81 85.5 82 47.0 83 46.0 84 45.0 85 26.0 86 7.0 87 4.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 269988.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.7390402536409 #Duplication Level Percentage of deduplicated Percentage of total 1 74.10954622899256 27.227136020860186 2 8.053149983365426 5.917300028149399 3 3.1424221955620975 3.4634872661007154 4 2.0274016795878658 2.9793916766671114 5 1.549535744170338 2.846422803976473 6 1.4950953211480882 3.295702031201387 7 1.1825669667610972 3.041246277612338 8 1.1613956911413335 3.4134850437797235 9 1.0192456976943474 3.370149784434864 >10 6.164873829278866 33.51000785220084 >50 0.05343226704035649 1.3430226528586455 >100 0.027220211511124998 1.801561550883743 >500 0.008065247855148148 1.9500866705186897 >1k 0.006048935891361112 5.841000340755886 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC 4274 1.5830333199994076 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG 3802 1.408210735291939 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC 3363 1.245610916040713 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 1910 0.7074388491340355 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1321 0.48928100508170735 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTTGTCTT 1100 0.4074255152080833 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCT 805 0.2981613997659155 No Hit CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 775 0.2870497948056951 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTA 708 0.2622338770612027 No Hit GAACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCT 676 0.25038149843696755 No Hit CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT 627 0.2322325436686075 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 575 0.21297242840422537 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTT 567 0.21000933374816658 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTC 532 0.1970457946279094 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCC 338 0.12519074921848378 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 321 0.11889417307435887 No Hit TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 286 0.10593063395410167 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 275 0.10185637880202082 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 273 0.10111560513800613 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2400106671407618 0.0 2 0.0 0.0 0.0 1.4559906366208868 0.0 3 0.0 0.0 0.0 1.7863756907714416 0.0 4 0.0 0.0 0.0 2.4486273464005808 0.0 5 0.0 0.0 0.0 4.831325836703853 0.0 6 0.0 0.0 0.0 5.799146628739055 0.0 7 0.0 0.0 0.0 6.768078581270279 0.0 8 0.0 0.0 0.0 8.072210616768153 0.0 9 0.0 0.0 0.0 8.605567654858735 0.0 10 0.0 0.0 0.0 11.111604960220454 0.0 11 0.0 0.0 0.0 12.562039794361231 0.0 12 0.0 0.0 0.0 15.359941923344742 0.0 13 0.0 0.0 0.0 15.972191356652889 0.0 14 0.0 0.0 0.0 16.243684904514275 0.0 15 3.703868320073485E-4 0.0 0.0 16.86741632961465 0.0 16 3.703868320073485E-4 0.0 0.0 17.584855623212885 0.0 17 3.703868320073485E-4 0.0 0.0 18.343037468331925 0.0 18 3.703868320073485E-4 0.0 0.0 19.134924515163636 0.0 19 3.703868320073485E-4 0.0 0.0 20.02570484614131 0.0 20 3.703868320073485E-4 0.0 0.0 20.54535757144762 0.0 21 3.703868320073485E-4 0.0 0.0 21.059824881105826 0.0 22 3.703868320073485E-4 0.0 0.0 21.592441145532394 0.0 23 3.703868320073485E-4 0.0 0.0 22.10024149221447 0.0 24 3.703868320073485E-4 0.0 0.0 22.502851978606458 0.0 25 3.703868320073485E-4 0.0 0.0 22.901017823014357 0.0 26 3.703868320073485E-4 0.0 0.0 23.279923552157875 0.0 27 3.703868320073485E-4 0.0 0.0 23.696238351334134 0.0 28 3.703868320073485E-4 0.0 0.0 24.055513578381262 0.0 29 7.40773664014697E-4 0.0 0.0 24.412566484436347 0.0 30 7.40773664014697E-4 0.0 0.0 24.795916855563952 0.0 31 7.40773664014697E-4 0.0 0.0 25.152599374787027 0.0 32 7.40773664014697E-4 0.0 0.0 25.51668963065025 0.0 33 7.40773664014697E-4 0.0 0.0 25.866705186897196 0.0 34 7.40773664014697E-4 0.0 0.0 26.225980413944324 0.0 35 7.40773664014697E-4 0.0 0.0 26.5774775175193 0.0 36 7.40773664014697E-4 0.0 0.0 26.91786301613405 0.0 37 7.40773664014697E-4 0.0 0.0 27.271582440701067 0.0 38 7.40773664014697E-4 0.0 0.0 27.60493058950768 0.0 39 7.40773664014697E-4 0.0 0.0 27.933093322666192 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAT 75 0.0 45.000004 14 GCTACGA 70 0.0 45.000004 10 TTAGGCG 25 3.882851E-5 45.0 1 GATACGT 20 7.0236897E-4 45.0 1 CATATAA 20 7.0236897E-4 45.0 17 CGTATGG 20 7.0236897E-4 45.0 2 CGACGGT 25 3.882851E-5 45.0 28 CGACAAA 20 7.0236897E-4 45.0 12 AATTGCA 25 3.882851E-5 45.0 31 CGAATGG 20 7.0236897E-4 45.0 2 ATTGGCA 20 7.0236897E-4 45.0 12 CTCGAAT 25 3.882851E-5 45.0 43 ATACGTT 20 7.0236897E-4 45.0 2 CGATCAC 20 7.0236897E-4 45.0 34 GACCTGC 20 7.0236897E-4 45.0 37 AGTACGG 20 7.0236897E-4 45.0 2 ATATTAG 40 6.7811925E-9 45.0 29 GGCGTAG 30 2.1593114E-6 44.999996 1 TACGGGT 30 2.1593114E-6 44.999996 4 ATGTAGG 30 2.1593114E-6 44.999996 2 >>END_MODULE