##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551641_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 337967 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8995020223868 33.0 31.0 34.0 30.0 34.0 2 31.97391461296517 33.0 31.0 34.0 30.0 34.0 3 31.970994209493828 33.0 31.0 34.0 30.0 34.0 4 35.6531761976761 37.0 35.0 37.0 33.0 37.0 5 35.675814502599366 37.0 35.0 37.0 35.0 37.0 6 35.54780792207523 37.0 35.0 37.0 33.0 37.0 7 35.83190962431243 37.0 35.0 37.0 35.0 37.0 8 35.48024215381975 37.0 35.0 37.0 33.0 37.0 9 37.274233874904944 39.0 37.0 39.0 34.0 39.0 10 37.082800983527974 39.0 37.0 39.0 34.0 39.0 11 37.16683581533108 39.0 37.0 39.0 34.0 39.0 12 37.03995656380653 39.0 37.0 39.0 33.0 39.0 13 37.02740504250415 39.0 37.0 39.0 33.0 39.0 14 38.05253471492779 40.0 37.0 41.0 33.0 41.0 15 38.072362094524024 40.0 37.0 41.0 33.0 41.0 16 37.9596321534351 40.0 37.0 41.0 33.0 41.0 17 37.87952374048354 40.0 36.0 41.0 33.0 41.0 18 37.73795666440807 39.0 36.0 41.0 33.0 41.0 19 37.58795089461397 39.0 36.0 41.0 33.0 41.0 20 37.71067293552329 39.0 36.0 41.0 33.0 41.0 21 37.692546905467104 39.0 36.0 41.0 33.0 41.0 22 37.81375104669983 40.0 36.0 41.0 33.0 41.0 23 37.79600966958313 40.0 36.0 41.0 33.0 41.0 24 37.67729097811325 40.0 36.0 41.0 33.0 41.0 25 37.389582414851155 39.0 35.0 41.0 33.0 41.0 26 37.54991759550489 39.0 35.0 41.0 33.0 41.0 27 37.53422079670501 39.0 35.0 41.0 33.0 41.0 28 37.4327256803179 39.0 35.0 41.0 33.0 41.0 29 37.44490438415585 40.0 35.0 41.0 33.0 41.0 30 37.2021469551761 39.0 35.0 41.0 32.0 41.0 31 37.220187178038096 39.0 35.0 41.0 32.0 41.0 32 37.07868815594422 39.0 35.0 41.0 32.0 41.0 33 37.02146363402344 39.0 35.0 41.0 32.0 41.0 34 36.84873375211189 39.0 35.0 41.0 31.0 41.0 35 36.74709069228653 39.0 35.0 41.0 31.0 41.0 36 36.60483124091997 39.0 35.0 41.0 31.0 41.0 37 36.4814316190634 39.0 35.0 41.0 31.0 41.0 38 36.41528610781526 39.0 35.0 41.0 30.0 41.0 39 36.34980634203931 39.0 35.0 41.0 30.0 41.0 40 36.184559439235194 39.0 35.0 41.0 30.0 41.0 41 36.07174960868961 39.0 35.0 40.0 30.0 41.0 42 36.02536046418733 39.0 35.0 40.0 30.0 41.0 43 36.00495906405063 39.0 35.0 40.0 30.0 41.0 44 36.07852541816213 39.0 35.0 40.0 30.0 41.0 45 36.09766338133605 39.0 35.0 40.0 30.0 41.0 46 36.01391851867194 38.0 35.0 40.0 30.0 41.0 47 35.857033378998544 38.0 35.0 40.0 30.0 41.0 48 35.8291756295733 38.0 35.0 40.0 30.0 41.0 49 35.81876337038823 38.0 35.0 40.0 30.0 41.0 50 35.65133282243533 38.0 35.0 40.0 29.0 41.0 51 34.79912535839298 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 12.0 10 10.0 11 7.0 12 12.0 13 15.0 14 19.0 15 21.0 16 26.0 17 68.0 18 115.0 19 247.0 20 546.0 21 954.0 22 1463.0 23 1745.0 24 2135.0 25 2550.0 26 3101.0 27 3637.0 28 3743.0 29 4188.0 30 5065.0 31 6295.0 32 8352.0 33 11878.0 34 21695.0 35 28033.0 36 27656.0 37 41830.0 38 71799.0 39 90710.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.19573212769294 18.196155245926377 21.754786709945055 12.85332591643563 2 29.604073770516052 31.775291670488535 22.306023960919262 16.314610598076143 3 29.578331612258 29.862678900602724 25.174351341994928 15.38463814514435 4 27.824018321315396 22.63800903638521 32.37653380359621 17.161438838703187 5 30.030742646471403 26.751724280772976 22.645110321421914 20.57242275133371 6 24.513340059828327 37.83594256243953 23.193980477383885 14.456736900348258 7 70.78620101962618 6.375178641701705 17.451112090825436 5.387508247846683 8 68.94164223134212 12.601526184509137 11.6449239126897 6.811907671459048 9 63.6363905351706 8.097240263102611 13.067548015042888 15.198821186683906 10 41.20254344359064 21.81662706713969 19.608127420724507 17.372702068545152 11 33.357102912414526 21.28965254004089 24.571038000751553 20.78220654679303 12 25.515804797509816 19.97088473134951 30.500019232646974 24.0132912384937 13 24.676373728796005 22.622622918805682 34.24002935197815 18.460974000420162 14 20.69787878698216 28.273470486763504 28.611077412883507 22.41757331337083 15 18.25503673435572 22.380291566928133 37.105101977412 22.25956972130415 16 20.41501093302009 22.718786153677726 29.101361967292664 27.76484094600952 17 20.46116928575867 24.570742113875024 29.666210014587225 25.301878585779086 18 21.09850961780292 23.237475848233704 30.29644906159477 25.367565472368604 19 22.648365077063737 24.709513058967296 26.897004737148894 25.745117126820073 20 24.499729263507973 24.864557782268683 30.033997402113222 20.601715552110118 21 23.059647835439552 28.976497705397275 27.473392372628098 20.49046208653508 22 21.400018344986343 22.5069311500827 28.982119556051327 27.110930948879624 23 22.403962517050484 26.671243050356985 27.726375652060703 23.198418780531828 24 23.856471193933135 24.873138501688036 26.46145925489767 24.80893104948116 25 20.61473457467741 30.03310974148364 25.404255445058244 23.947900238780708 26 20.91269265934248 24.74058118100288 28.445084875150535 25.901641284504105 27 25.18855391206834 26.25581787570976 25.166954170081695 23.38867404214021 28 20.640180846058932 25.300399151396434 29.416481490796436 24.642938511748188 29 25.012797107409895 24.52073723174156 26.509688815771952 23.95677684507659 30 22.356620616805785 29.15491749194448 26.62774767950717 21.860714211742565 31 26.264990368882167 24.80182976444446 21.77372347004293 27.15945639663044 32 25.919098610219343 29.808531602197846 22.700145280456375 21.572224507126435 33 24.32959430950359 24.831418452097395 24.307698680640417 26.531288557758597 34 26.905585456568243 24.5452958424935 24.007373500963112 24.541745199975146 35 24.70803362458465 27.568372059994022 23.85824651519231 23.865347800229017 36 27.69116511375371 25.898090641985753 23.401101290954443 23.00964295330609 37 22.49894220441641 29.464119277917668 26.05579834717591 21.98114017049002 38 21.54677823574491 27.487299055824977 24.350602277737178 26.615320430692936 39 27.20117644622108 25.699846434711084 25.105705586640113 21.993271532427723 40 23.06526968609361 25.466391689129413 28.91465734820263 22.553681276574338 41 25.559300168359634 24.93971304890714 23.409090236620735 26.09189654611249 42 23.31440643613134 25.872348483727702 27.296156133587008 23.517088946553955 43 27.008849976476995 23.04366994410697 24.961608677770315 24.985871401645724 44 23.516793059677426 23.213804898111352 28.010131166652364 25.259270875558858 45 23.23925116949288 23.030946808416207 26.05076827027491 27.679033751816007 46 27.450904970011862 25.610784484875744 25.449822024043765 21.488488521068625 47 21.310660508274477 24.150286862326794 32.14840502179207 22.39064760760666 48 23.875112067154486 24.50742232229774 26.169714794639713 25.44775081590806 49 22.77174990457648 21.697384655898357 31.71256365266431 23.818301786860847 50 23.75794086404886 21.604476176668136 29.01466711246956 25.62291584681345 51 23.512354756529483 22.06073374027642 25.621732299307332 28.805179203886773 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 156.0 1 371.0 2 586.0 3 1729.0 4 2872.0 5 1934.0 6 996.0 7 1020.0 8 1044.0 9 1024.5 10 1005.0 11 979.0 12 953.0 13 967.0 14 981.0 15 922.0 16 863.0 17 798.5 18 734.0 19 734.5 20 735.0 21 775.5 22 816.0 23 836.5 24 857.0 25 1136.0 26 1899.5 27 2384.0 28 2635.5 29 2887.0 30 3193.5 31 3500.0 32 3825.5 33 4151.0 34 4671.0 35 5191.0 36 5645.0 37 6099.0 38 6514.0 39 6929.0 40 8827.5 41 10726.0 42 12452.0 43 14178.0 44 16436.5 45 18695.0 46 32958.0 47 47221.0 48 40731.0 49 34241.0 50 33576.5 51 32912.0 52 28571.0 53 24230.0 54 22008.0 55 19786.0 56 18599.5 57 17413.0 58 16280.0 59 15147.0 60 14141.5 61 13136.0 62 12575.0 63 12014.0 64 11151.5 65 10289.0 66 9058.5 67 7828.0 68 6519.5 69 5211.0 70 4594.5 71 3978.0 72 3267.0 73 2556.0 74 2047.0 75 1152.5 76 767.0 77 617.0 78 467.0 79 384.5 80 302.0 81 212.0 82 122.0 83 75.0 84 28.0 85 22.5 86 17.0 87 9.0 88 1.0 89 2.0 90 3.0 91 2.5 92 2.0 93 3.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 337967.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.48533594157783 #Duplication Level Percentage of deduplicated Percentage of total 1 72.37054330350696 22.062403248819155 2 9.778921264632059 5.962273997970948 3 3.43758095489295 3.1438743070884443 4 1.921746515615562 2.343403524923882 5 1.324243183714603 2.018499916194212 6 1.0226252426840339 1.8705044439336196 7 0.8818127523986974 1.8817650596109177 8 0.7060492308351475 1.721931839464168 9 0.691069384274158 1.896073410468334 >10 7.710616615146295 43.583506159357 >50 0.09087762102747604 1.914644450403263 >100 0.050931413982431624 2.9725852144597646 >500 0.006990586232882773 1.744156154612863 >1k 0.002995965528378331 1.7627272011186028 >5k 0.002995965528378331 5.121651071574828 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 5802 1.7167356576233774 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 5798 1.7155521101172597 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 5223 1.545417156112875 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 2674 0.7912015078395227 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1834 0.5426565315548559 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 1282 0.37932697571064633 No Hit GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT 959 0.2837555145916613 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA 935 0.27665422955495655 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT 905 0.2677776232590756 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 844 0.24972852379078428 No Hit CCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 775 0.2293123293102581 No Hit CTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGCT 672 0.19883598102773348 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 639 0.18907171410226442 No Hit TCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 488 0.14439279574633027 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 454 0.13433264194433184 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCC 432 0.12782313066068582 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 427 0.12634369627803899 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20652903981749698 0.0 2 0.0 0.0 0.0 1.5099107309293511 0.0 3 0.0 0.0 0.0 1.8984101998124077 0.0 4 0.0 0.0 0.0 2.7064772596141045 0.0 5 0.0 0.0 0.0 5.611494613379413 0.0 6 0.0 0.0 0.0 6.554781975755029 0.0 7 0.0 0.0 0.0 7.7504608438101945 0.0 8 0.0 0.0 0.0 9.284930185491483 0.0 9 0.0 0.0 0.0 9.871377974772685 0.0 10 0.0 0.0 0.0 12.69443466373936 0.0 11 0.0 0.0 0.0 14.0510759926265 0.0 12 0.0 0.0 0.0 16.89839540546858 0.0 13 0.0 0.0 0.0 17.48661851600896 0.0 14 0.0 0.0 0.0 17.749366062367034 0.0 15 0.0 0.0 0.0 18.378421561868468 0.0 16 0.0 0.0 0.0 19.128494793870406 0.0 17 0.0 0.0 0.0 19.921767509845637 0.0 18 0.0 0.0 0.0 20.834874410815257 0.0 19 0.0 0.0 0.0 21.608322706063017 0.0 20 0.0 0.0 0.0 22.14802036885258 0.0 21 0.0 0.0 0.0 22.660200552124913 0.0 22 0.0 0.0 0.0 23.209366594963413 0.0 23 0.0 0.0 0.0 23.76622569659168 0.0 24 0.0 0.0 0.0 24.195261667559258 0.0 25 0.0 0.0 0.0 24.572813322010727 0.0 26 0.0 0.0 0.0 24.947406107696906 0.0 27 0.0 0.0 0.0 25.363423056097194 0.0 28 0.0 0.0 0.0 25.759911470646543 0.0 29 0.0 0.0 0.0 26.113200401222606 0.0 30 0.0 0.0 0.0 26.532176218388187 0.0 31 0.0 0.0 0.0 26.92156334790083 0.0 32 0.0 0.0 0.0 27.277811147242186 0.0 33 0.0 0.0 0.0 27.664535294866067 0.0 34 0.0 0.0 0.0 28.011018827281955 0.0 35 0.0 0.0 0.0 28.37200081664778 0.0 36 0.0 0.0 0.0 28.72528974722384 0.0 37 0.0 0.0 0.0 29.07946633842949 0.0 38 0.0 0.0 0.0 29.41233907452503 0.0 39 0.0 0.0 0.0 29.77036219512556 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGGC 30 2.1609376E-6 45.000004 17 TGATTCG 30 2.1609376E-6 45.000004 15 ACTAAGG 30 2.1609376E-6 45.000004 2 TAGATAG 30 2.1609376E-6 45.000004 1 TTCGGCA 30 2.1609376E-6 45.000004 18 GATTCGG 30 2.1609376E-6 45.000004 16 GGTAATC 20 7.0262124E-4 45.0 8 CTACTCG 20 7.0262124E-4 45.0 36 CCTACGC 20 7.0262124E-4 45.0 38 GTGATAG 20 7.0262124E-4 45.0 1 ATCACAC 20 7.0262124E-4 45.0 12 TACGAAT 95 0.0 45.0 12 GTACTAG 20 7.0262124E-4 45.0 1 CAGTCGA 20 7.0262124E-4 45.0 41 GCTACGA 95 0.0 45.0 10 CAGTACG 20 7.0262124E-4 45.0 2 AGCTACG 95 0.0 45.0 9 GATAGCG 45 3.8380676E-10 45.0 1 ACGCGTG 20 7.0262124E-4 45.0 41 TCAAAGT 20 7.0262124E-4 45.0 12 >>END_MODULE