##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551627_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 264917 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83747362381425 33.0 31.0 34.0 30.0 34.0 2 31.936508415843452 33.0 31.0 34.0 30.0 34.0 3 31.938361826534347 33.0 31.0 34.0 30.0 34.0 4 35.64346191448642 37.0 35.0 37.0 33.0 37.0 5 35.63969092206238 37.0 35.0 37.0 35.0 37.0 6 35.51763005016666 37.0 35.0 37.0 33.0 37.0 7 35.79184046323943 37.0 35.0 37.0 35.0 37.0 8 35.37316216022377 37.0 35.0 37.0 33.0 37.0 9 37.11786710554627 39.0 37.0 39.0 34.0 39.0 10 37.05111789730368 39.0 37.0 39.0 33.0 39.0 11 37.154467248232464 39.0 37.0 39.0 34.0 39.0 12 37.01277381217513 39.0 37.0 39.0 33.0 39.0 13 36.917762921971786 39.0 37.0 39.0 33.0 39.0 14 37.9191784596685 40.0 37.0 41.0 33.0 41.0 15 37.883208703103236 40.0 37.0 41.0 33.0 41.0 16 37.8826651366277 40.0 36.0 41.0 33.0 41.0 17 37.75820728756554 39.0 36.0 41.0 33.0 41.0 18 37.616615770222374 39.0 36.0 41.0 33.0 41.0 19 37.445943446437944 39.0 36.0 41.0 32.0 41.0 20 37.42670723283142 39.0 35.0 41.0 32.0 41.0 21 37.49831456644912 39.0 35.0 41.0 33.0 41.0 22 37.63228860360037 39.0 35.0 41.0 33.0 41.0 23 37.552225791474314 39.0 35.0 41.0 33.0 41.0 24 37.48430640540245 39.0 35.0 41.0 33.0 41.0 25 37.20077609213452 39.0 35.0 41.0 32.0 41.0 26 37.372924349890724 39.0 35.0 41.0 33.0 41.0 27 37.321825326422996 39.0 35.0 41.0 33.0 41.0 28 37.17309194955401 39.0 35.0 41.0 32.0 41.0 29 37.2248968544865 39.0 35.0 41.0 32.0 41.0 30 36.96226365238924 39.0 35.0 41.0 31.0 41.0 31 36.878833747928596 39.0 35.0 41.0 31.0 41.0 32 36.671130957998166 39.0 35.0 41.0 31.0 41.0 33 36.56204396093871 39.0 35.0 41.0 30.0 41.0 34 36.32171963294164 39.0 35.0 41.0 30.0 41.0 35 36.21524477477852 39.0 35.0 41.0 30.0 41.0 36 36.118346500979555 39.0 35.0 41.0 30.0 41.0 37 35.941045686007314 39.0 35.0 41.0 29.0 41.0 38 35.701212077745105 38.0 35.0 40.0 28.0 41.0 39 35.721225893393026 38.0 35.0 40.0 28.0 41.0 40 35.607941355216916 38.0 35.0 40.0 27.0 41.0 41 35.54825473638913 38.0 35.0 40.0 27.0 41.0 42 35.41860280767184 38.0 35.0 40.0 27.0 41.0 43 35.45071097740047 38.0 35.0 40.0 28.0 41.0 44 35.520740458332234 38.0 35.0 40.0 28.0 41.0 45 35.58027986123956 38.0 35.0 40.0 28.0 41.0 46 35.56616978147873 38.0 35.0 40.0 28.0 41.0 47 35.43869966819796 38.0 35.0 40.0 27.0 41.0 48 35.403284802409814 38.0 35.0 40.0 28.0 41.0 49 35.435241981450794 38.0 35.0 40.0 28.0 41.0 50 35.246028001223024 38.0 35.0 40.0 27.0 41.0 51 34.37627634315653 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 5.0 11 1.0 12 9.0 13 5.0 14 17.0 15 17.0 16 16.0 17 51.0 18 90.0 19 230.0 20 552.0 21 959.0 22 1394.0 23 1630.0 24 2071.0 25 2456.0 26 3023.0 27 3341.0 28 3597.0 29 3770.0 30 4532.0 31 5568.0 32 7201.0 33 9927.0 34 16979.0 35 22840.0 36 21746.0 37 32529.0 38 56082.0 39 64248.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.671406516003124 16.47648131301502 20.301075431172784 13.551036739809073 2 27.97177984047834 34.92829829720252 21.555053092100547 15.544868770218597 3 27.00241962576958 33.993288463933986 25.546491920110824 13.457799990185606 4 24.690374721139076 21.18474843064054 37.55251644854803 16.572360399672352 5 31.529120441496772 24.539006556770612 24.5533506720973 19.37852232963532 6 22.52516826024755 39.21454644284814 24.42047886696588 13.839806429938434 7 65.83722448917962 5.503233088099291 23.189904762623765 5.469637660097313 8 63.445154520094974 15.472015763427791 13.603128527048094 7.479701189429141 9 57.92531245635425 7.262652075933216 15.413506871963673 19.398528595748857 10 40.54515187775794 20.157634277905913 22.071441243861283 17.225772600474865 11 32.273882008327135 19.941717594567354 27.48785468656221 20.296545710543302 12 25.05803704556521 16.9611614203694 32.42223035894261 25.558571175122776 13 24.459358969035584 21.431995681666333 37.43851847937278 16.670126869925298 14 19.50384460038427 29.919559711154815 28.71352159355572 21.863074094905198 15 15.418791546031398 21.59506562432762 41.44732123646274 21.53882159317824 16 17.020047788552642 21.495034293759932 30.679797823469237 30.805120094218193 17 17.460185643050465 24.24797200632651 33.102443406802884 25.18939894382014 18 18.197397675498365 22.50402956397664 32.724211734241294 26.574361026283704 19 19.159208355824656 24.325354733746796 29.044568676226895 27.470868234201657 20 21.901199243536652 23.98185091934455 34.10653147967099 20.010418357447804 21 20.533978566871887 30.842112812692278 28.941895008625345 19.682013611810493 22 18.17890131626132 22.06728899995093 31.67407150164014 28.07973818214762 23 20.054583133585236 27.92459525058792 29.206128712011687 22.814692903815157 24 21.640362830622422 24.204939660346447 27.850232336920623 26.304465172110508 25 17.335995802458886 32.430912323482445 26.406383886273815 23.826707987784854 26 18.99878075019723 22.992484438522254 31.691812907438933 26.31692190384158 27 24.017333730942145 25.21431240728228 25.675966434770135 25.09238742700544 28 17.24804372690314 26.72270937689918 31.982092504444786 24.04715439175289 29 24.3302619310954 22.258669696546466 27.979706851579927 25.431361520778207 30 19.67597398430452 29.91012279317673 27.006571869679934 23.407331352838813 31 25.4038057202822 26.82274070746687 21.16021244389752 26.61324112835341 32 25.74202486061672 32.6581533083947 20.9431633304016 20.65665850058698 33 23.372603494679467 27.059418610357206 21.389340812405393 28.178637082557934 34 28.299052155958282 25.7593887896964 22.69201297010007 23.249546084245253 35 22.790911870510385 27.540701427239473 22.199783328363225 27.468603373886914 36 29.151017111019677 28.79052684425688 21.900821766817533 20.157634277905913 37 20.48226425635199 28.36511058180487 26.98430074325166 24.16832441859148 38 19.579717420928063 34.68407085992972 21.517305420188208 24.218906298954014 39 27.027710565950848 28.930193230332517 23.64627411604389 20.395822087672745 40 21.444452413397403 29.362781550447874 26.076091757040885 23.116674279113838 41 27.424816074468605 25.020289373652883 22.008025155048564 25.54686939682995 42 22.339827191157983 26.391662294228002 28.530445384780894 22.738065129833117 43 28.333402537398506 23.368828727488232 23.671942532944282 24.625826202168984 44 23.48735641729296 23.49226361464157 27.74302894868959 25.27735101937588 45 21.093021587893567 23.057032957492346 26.68005450763824 29.169890946975848 46 28.657277562406335 26.376940702182196 24.968952539852104 19.996829195559364 47 19.284153149854482 24.891192335712695 34.309991431278476 21.514663083154346 48 23.57153372565747 24.933469728254508 25.293205041579057 26.201791504508957 49 21.64149526077979 20.94580566743546 33.99215603377662 23.42054303800813 50 23.993930174356496 20.3773257284357 29.385807630314396 26.2429364668934 51 22.256782312950847 20.961659689638644 26.09911783690741 30.6824401605031 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 209.0 2 348.0 3 1921.0 4 3494.0 5 2288.5 6 1083.0 7 1020.0 8 957.0 9 1007.0 10 1057.0 11 1043.5 12 1030.0 13 991.5 14 953.0 15 892.5 16 832.0 17 818.5 18 805.0 19 732.0 20 659.0 21 683.5 22 708.0 23 709.0 24 710.0 25 1018.5 26 1408.0 27 1489.0 28 1826.0 29 2163.0 30 2319.5 31 2476.0 32 3000.0 33 3524.0 34 3578.5 35 3633.0 36 4413.5 37 5194.0 38 5254.5 39 5315.0 40 6538.0 41 7761.0 42 9680.5 43 11600.0 44 13650.5 45 15701.0 46 31871.0 47 48041.0 48 39093.5 49 30146.0 50 28792.0 51 27438.0 52 22954.5 53 18471.0 54 15854.0 55 13237.0 56 12128.0 57 11019.0 58 10113.5 59 9208.0 60 8589.0 61 7970.0 62 7283.0 63 6596.0 64 6166.5 65 5737.0 66 4981.0 67 4225.0 68 3546.0 69 2867.0 70 2570.5 71 2274.0 72 2111.0 73 1948.0 74 1546.5 75 931.0 76 717.0 77 620.0 78 523.0 79 382.0 80 241.0 81 166.5 82 92.0 83 77.5 84 63.0 85 62.5 86 62.0 87 35.0 88 8.0 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 264917.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.70634198635799 #Duplication Level Percentage of deduplicated Percentage of total 1 75.51635252275867 26.208963562172304 2 9.37102335142425 6.504678823933534 3 3.3836181112210824 3.5229902195782077 4 1.7608735847209684 2.444539233042802 5 1.2029191999390927 2.0874462567521146 6 0.9157847797004666 1.9070123850111544 7 0.7646041569233112 1.8575629348059959 8 0.7428515493294758 2.0625327932899737 9 0.5710059493381769 1.7835774978578196 >10 5.638275888322113 34.121630548435924 >50 0.08265990885657418 1.9696735203856304 >100 0.035891802529828265 2.4030167939392335 >500 0.003262891139075297 0.7172057663343614 >1k 0.0076134126578423595 4.498390061792938 >5k 0.003262891139075297 7.910779602668006 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC 7461 2.8163538013793 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCG 7210 2.7216071448793397 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC 6286 2.372818656409366 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 2976 1.123370716111084 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2399 0.9055666491769121 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT 1663 0.6277437839021278 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAAAGAGT 1439 0.5431889988184979 No Hit GAACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 1191 0.44957477247590755 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTA 1181 0.4458000052846741 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTC 1068 0.40314513602373575 No Hit CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT 734 0.27706791183653745 No Hit CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 589 0.222333787563652 No Hit TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 577 0.21780406693417184 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 441 0.16646723313339648 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC 436 0.16457984953777977 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATG 425 0.16042760562742295 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT 420 0.15854022203180618 No Hit ACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 355 0.13400423528878858 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCAAAGAG 306 0.11550787605174452 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTAT 301 0.11362049245612776 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGT 280 0.10569348135453746 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7747671912334807E-4 0.0 0.0 0.2932994107588415 0.0 2 3.7747671912334807E-4 0.0 0.0 2.091221023943348 0.0 3 3.7747671912334807E-4 0.0 0.0 2.569106550353507 0.0 4 3.7747671912334807E-4 0.0 0.0 3.6732259537893 0.0 5 3.7747671912334807E-4 0.0 0.0 7.611063087684067 0.0 6 3.7747671912334807E-4 0.0 0.0 8.723109502221451 0.0 7 3.7747671912334807E-4 0.0 0.0 10.34210715054149 0.0 8 3.7747671912334807E-4 0.0 0.0 12.386521061313543 0.0 9 3.7747671912334807E-4 0.0 0.0 13.082210654657874 0.0 10 3.7747671912334807E-4 0.0 0.0 17.213315868743795 0.0 11 3.7747671912334807E-4 0.0 0.0 18.917245778866587 0.0 12 3.7747671912334807E-4 0.0 0.0 23.29182347678707 0.0 13 3.7747671912334807E-4 0.0 0.0 24.088299354137334 0.0 14 3.7747671912334807E-4 0.0 0.0 24.436332889169062 0.0 15 3.7747671912334807E-4 0.0 0.0 25.298489715646788 0.0 16 3.7747671912334807E-4 0.0 0.0 26.224062630937237 0.0 17 3.7747671912334807E-4 0.0 0.0 27.299493803719656 0.0 18 3.7747671912334807E-4 0.0 0.0 28.382474510884542 0.0 19 3.7747671912334807E-4 0.0 0.0 29.606254034282436 0.0 20 3.7747671912334807E-4 0.0 0.0 30.30232110434589 0.0 21 3.7747671912334807E-4 0.0 0.0 30.963660316249996 0.0 22 3.7747671912334807E-4 0.0 0.0 31.644628317548516 0.0 23 3.7747671912334807E-4 0.0 0.0 32.26180275331519 0.0 24 3.7747671912334807E-4 0.0 0.0 32.760072022558006 0.0 25 3.7747671912334807E-4 0.0 0.0 33.201719783932326 0.0 26 3.7747671912334807E-4 0.0 0.0 33.64902969609349 0.0 27 3.7747671912334807E-4 0.0 0.0 34.125405315627155 0.0 28 3.7747671912334807E-4 0.0 0.0 34.52666306805528 0.0 29 3.7747671912334807E-4 0.0 0.0 34.947927086596934 0.0 30 3.7747671912334807E-4 0.0 0.0 35.3790054998358 0.0 31 3.7747671912334807E-4 0.0 0.0 35.837262236851544 0.0 32 3.7747671912334807E-4 0.0 0.0 36.26683074321391 0.0 33 3.7747671912334807E-4 0.0 0.0 36.63109577716794 0.0 34 3.7747671912334807E-4 0.0 0.0 37.037260726944666 0.0 35 7.549534382466961E-4 0.0 0.0 37.46154455923931 0.0 36 7.549534382466961E-4 0.0 0.0 37.82807445350808 0.0 37 7.549534382466961E-4 0.0 0.0 38.19422687105773 0.0 38 7.549534382466961E-4 0.0 0.0 38.589822472699 0.0 39 7.549534382466961E-4 0.0 0.0 38.94616049555144 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.023449E-4 45.0 25 TTGATCC 20 7.023449E-4 45.0 17 CAGCGGA 50 2.1827873E-11 45.0 37 AACCGCG 20 7.023449E-4 45.0 1 TGATAAG 20 7.023449E-4 45.0 26 TACCCTT 20 7.023449E-4 45.0 23 CTCACGA 20 7.023449E-4 45.0 24 TACCCGC 20 7.023449E-4 45.0 28 CGTATGG 25 3.8826536E-5 45.0 2 GTCGAAT 70 0.0 45.0 43 CAAGTCG 20 7.023449E-4 45.0 15 GGTCGAA 20 7.023449E-4 45.0 42 ATTACGG 20 7.023449E-4 45.0 2 TATATCA 25 3.8826536E-5 45.0 41 GTTACGG 20 7.023449E-4 45.0 2 TGTCTAT 25 3.8826536E-5 45.0 37 CGAGGGT 25 3.8826536E-5 45.0 4 GCTTAAG 20 7.023449E-4 45.0 1 GCGGGTT 45 3.8198777E-10 45.0 5 TCTAAAC 20 7.023449E-4 45.0 34 >>END_MODULE