##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551622_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 362021 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.835009571267964 33.0 31.0 34.0 30.0 34.0 2 31.926667237535945 33.0 31.0 34.0 30.0 34.0 3 31.919485333723735 33.0 31.0 34.0 30.0 34.0 4 35.65005897447938 37.0 35.0 37.0 33.0 37.0 5 35.61563279478262 37.0 35.0 37.0 33.0 37.0 6 35.498026357586994 37.0 35.0 37.0 33.0 37.0 7 35.765974902008445 37.0 35.0 37.0 35.0 37.0 8 35.323760223854414 37.0 35.0 37.0 33.0 37.0 9 37.01361523226553 39.0 37.0 39.0 33.0 39.0 10 36.93441540684104 39.0 37.0 39.0 33.0 39.0 11 37.07615580311639 39.0 37.0 39.0 34.0 39.0 12 36.97457329823408 39.0 37.0 39.0 33.0 39.0 13 36.90744459575549 39.0 37.0 39.0 33.0 39.0 14 37.98768303496206 40.0 37.0 41.0 33.0 41.0 15 37.92282768126711 40.0 37.0 41.0 33.0 41.0 16 37.904801102698464 40.0 37.0 41.0 33.0 41.0 17 37.73584405324553 40.0 36.0 41.0 32.0 41.0 18 37.582772822571066 39.0 36.0 41.0 33.0 41.0 19 37.4502639349651 39.0 36.0 41.0 32.0 41.0 20 37.38900229544695 39.0 35.0 41.0 32.0 41.0 21 37.542916018684 39.0 36.0 41.0 33.0 41.0 22 37.63299919065469 39.0 36.0 41.0 33.0 41.0 23 37.54600699959395 40.0 36.0 41.0 33.0 41.0 24 37.469290455526064 39.0 35.0 41.0 32.0 41.0 25 37.312567502990156 39.0 35.0 41.0 32.0 41.0 26 37.39341916629146 39.0 35.0 41.0 32.0 41.0 27 37.28544200474558 39.0 35.0 41.0 32.0 41.0 28 37.15179782388314 39.0 35.0 41.0 31.0 41.0 29 37.22807240463951 39.0 35.0 41.0 32.0 41.0 30 36.938641681007454 39.0 35.0 41.0 31.0 41.0 31 36.955809193389335 39.0 35.0 41.0 31.0 41.0 32 36.74065040425832 39.0 35.0 41.0 31.0 41.0 33 36.630375033492534 39.0 35.0 41.0 30.0 41.0 34 36.5093544297154 39.0 35.0 41.0 30.0 41.0 35 36.32482646034346 39.0 35.0 41.0 30.0 41.0 36 36.20036959181926 39.0 35.0 41.0 29.0 41.0 37 36.069112012839035 39.0 35.0 41.0 29.0 41.0 38 36.018885644755414 39.0 35.0 41.0 28.0 41.0 39 35.906847945284945 39.0 35.0 41.0 28.0 41.0 40 35.87695465180197 39.0 35.0 41.0 28.0 41.0 41 35.84533770140406 39.0 35.0 40.0 27.0 41.0 42 35.73615342756359 39.0 35.0 41.0 27.0 41.0 43 35.72478392137473 39.0 35.0 41.0 28.0 41.0 44 35.92788263664263 39.0 35.0 41.0 28.0 41.0 45 35.8925034735554 39.0 35.0 41.0 29.0 41.0 46 35.789396195248344 39.0 35.0 40.0 28.0 41.0 47 35.53644125617022 38.0 35.0 40.0 27.0 41.0 48 35.55126912527174 38.0 35.0 40.0 27.0 41.0 49 35.64120865916618 38.0 35.0 40.0 28.0 41.0 50 35.41749511768654 38.0 35.0 40.0 27.0 41.0 51 34.630546294275746 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 8.0 11 8.0 12 4.0 13 9.0 14 11.0 15 15.0 16 21.0 17 49.0 18 130.0 19 315.0 20 837.0 21 1742.0 22 2658.0 23 3110.0 24 3280.0 25 3652.0 26 3998.0 27 4224.0 28 4339.0 29 4684.0 30 5590.0 31 7091.0 32 9249.0 33 12656.0 34 20878.0 35 27472.0 36 28527.0 37 41988.0 38 74361.0 39 101064.0 40 40.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.71197527215272 15.767317365567191 19.2961181809895 14.22458918129059 2 27.076329826170305 37.77239441910829 20.092757050005385 15.058518704716025 3 25.739667035890186 36.79206454874165 23.943638628698334 13.524629786669834 4 24.54885213841186 19.81514884495651 40.00872877540253 15.6272702412291 5 34.46043185340077 22.779893984050652 22.617748694136527 20.141925468412055 6 21.987398521080266 40.463950986268756 24.230362327047324 13.318288165603654 7 64.79265015012942 5.360738741675207 24.625919490858266 5.220691617337116 8 61.69200129274268 17.228006110142783 14.122661392571148 6.957331204543382 9 56.47379571903287 7.1004168266481775 14.089790371276804 22.335997083042145 10 40.23413006427804 20.4706356813555 22.015297455120006 17.279936799246453 11 32.572972286138096 19.5182047450286 26.556746708063894 21.352076260769405 12 24.49719767637789 16.775822397043267 32.190121567533375 26.536858359045468 13 25.06871148358797 19.630352935326954 38.41213631253436 16.88879926855072 14 19.377328939481412 30.70567729496355 27.785957168230574 22.131036597324464 15 15.100505219310481 20.885804967115167 41.058115413194265 22.955574400380087 16 16.816980230428623 23.36218064697904 28.883407316150166 30.937431806442167 17 17.340706754580534 25.905127050640708 32.01250756171603 24.741658633062723 18 17.95227348689717 23.664925515370655 31.415304637023816 26.967496360708353 19 19.41351468561216 24.41792050737388 27.071081511845996 29.097483295167958 20 23.766853304090095 24.335881067672872 33.06299910778657 18.83426652045047 21 19.887520337218007 31.871355529099137 28.477353523690613 19.763770609992235 22 18.4160587369241 22.05977001334177 31.247911032785392 28.27626021694874 23 21.985741158662066 28.07544313727657 28.87788277475616 21.060932929305206 24 22.29069584361128 24.846901146618567 25.799055855875764 27.063347153894384 25 17.910010745233013 34.41430193276081 24.787236099563284 22.888451222442896 26 19.50853679758909 22.12799809955776 31.845942638686708 26.517522464166444 27 26.478298220268993 24.279254518384295 26.433273207907824 22.809174053438888 28 17.519425668676682 25.951809425420073 33.05581720397435 23.47294770192889 29 26.71253877537491 19.304128766010813 30.541322188491826 23.442010270122452 30 21.350695125420902 27.019703276881728 31.826330516737976 19.80327108095939 31 23.790608832084324 20.25573102112861 28.045058159609525 27.90860198717754 32 27.169694575729032 23.66879269434646 30.248521494609427 18.91299123531508 33 26.97053485847506 19.426221130818377 25.409575687598235 28.19366832310833 34 25.99932048140854 19.337276014374858 27.281566538957687 27.38183696525892 35 23.17075528767668 18.415506282784698 33.16851784841211 25.24522058112651 36 24.152190066322117 22.79425779167507 28.42431792630814 24.62923421569467 37 18.494783451788706 20.08060305893857 38.86791097753998 22.556702511732745 38 22.024136721350416 21.35704834802401 28.89970471326249 27.71911021736308 39 23.537861063308483 20.905693316133593 29.72976705771212 25.8266785628458 40 23.73370605572605 19.149717834048303 32.69478842387596 24.421787686349685 41 19.02292960905583 22.307545694863006 25.084732653630592 33.58479204245058 42 20.049389400062427 20.017899514116586 36.56500589744794 23.36770518837305 43 24.933360219434782 19.690294209451938 26.468906499899177 28.907439071214103 44 23.22903919938346 19.653003555042385 31.058971717110335 26.05898552846382 45 20.870888705351348 17.932661364948444 30.764237433740032 30.432212495960183 46 28.237864654260385 23.253347181517096 26.81004693097914 21.698741233243375 47 18.896970065272455 21.542672938862662 37.43097776095862 22.129379234906263 48 22.3752213269396 21.832987589117756 27.87545473881349 27.91633634512915 49 20.2493777985255 17.677980006684695 37.40169769157038 24.670944503219427 50 22.422179928788662 18.472685286212677 31.473864775800298 27.63127000919836 51 22.438477325900983 18.228776783667247 27.61248656845874 31.72025932197303 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 93.0 1 282.5 2 472.0 3 2322.5 4 4173.0 5 2759.0 6 1345.0 7 1267.5 8 1190.0 9 1207.0 10 1224.0 11 1238.0 12 1252.0 13 1203.5 14 1155.0 15 1085.5 16 1016.0 17 1008.0 18 1000.0 19 963.0 20 926.0 21 914.0 22 902.0 23 971.0 24 1040.0 25 1293.5 26 1887.0 27 2227.0 28 2746.0 29 3265.0 30 3641.0 31 4017.0 32 4434.0 33 4851.0 34 5239.5 35 5628.0 36 6196.5 37 6765.0 38 7061.0 39 7357.0 40 8640.0 41 9923.0 42 11982.0 43 14041.0 44 16446.0 45 18851.0 46 44680.5 47 70510.0 48 53406.5 49 36303.0 50 36024.0 51 35745.0 52 29686.5 53 23628.0 54 21729.0 55 19830.0 56 18328.0 57 16826.0 58 15157.5 59 13489.0 60 13222.5 61 12956.0 62 11869.0 63 10782.0 64 9481.0 65 8180.0 66 7203.5 67 6227.0 68 5418.0 69 4609.0 70 3957.0 71 3305.0 72 2827.0 73 2349.0 74 1924.0 75 1127.5 76 756.0 77 583.0 78 410.0 79 332.5 80 255.0 81 154.0 82 53.0 83 44.5 84 36.0 85 23.0 86 10.0 87 6.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 362021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.79627321778301 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50331392718054 25.179343531132513 2 8.70065168162521 5.880992028099374 3 3.324174401493909 3.370341188893453 4 1.9413553613932095 2.624423048258111 5 1.421420832312763 2.4019363403145326 6 1.1970895029958635 2.4274298345632963 7 1.0872257457376597 2.5720924846650473 8 0.9177273257521391 2.481261075243571 9 0.8415849350357558 2.5598190960394707 >10 5.947569172216995 31.048112752940778 >50 0.06467418073762651 1.5106550255195277 >100 0.040933025783307916 2.5836074410808334 >500 0.0032746420626646334 0.7102292033898586 >1k 0.006549284125329267 5.0125525819299055 >5k 0.0 0.0 >10k+ 0.002455981546998475 9.637204367929705 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCG 12133 3.3514630366746676 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTC 11884 3.2826824963192744 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGC 10815 2.987395758809572 No Hit GCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 3415 0.9433154430267857 Illumina PCR Primer Index 5 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCT 2958 0.8170796721737137 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2779 0.7676350266973463 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTTGCTCT 2039 0.5632269951190677 No Hit GAACTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCT 2025 0.5593598161432625 Illumina PCR Primer Index 5 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTC 1940 0.5358805152187304 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTA 1798 0.49665627132127693 No Hit CCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 1163 0.3212520820615379 Illumina PCR Primer Index 5 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 723 0.19971217139337222 Illumina PCR Primer Index 5 (95% over 24bp) GAATGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTT 702 0.1939114029296643 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATG 625 0.1726419185627353 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCC 517 0.14280939503509466 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTTTGCTC 476 0.13148408517737922 No Hit TCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 465 0.12844558741067505 Illumina PCR Primer Index 5 (95% over 23bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGT 432 0.11933009411056264 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTAT 416 0.11491046099535661 No Hit CGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 373 0.10303269699824043 Illumina PCR Primer Index 5 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.762270697003765E-4 0.0 0.0 0.2044080315782786 0.0 2 2.762270697003765E-4 0.0 0.0 1.7247618232091508 0.0 3 2.762270697003765E-4 0.0 0.0 2.19379538756039 0.0 4 2.762270697003765E-4 0.0 0.0 3.2857209940859784 0.0 5 2.762270697003765E-4 0.0 0.0 8.03378809516575 0.0 6 2.762270697003765E-4 0.0 0.0 9.148364321406769 0.0 7 2.762270697003765E-4 0.0 0.0 10.884727681543335 0.0 8 2.762270697003765E-4 0.0 0.0 12.70036821068391 0.0 9 5.52454139400753E-4 0.0 0.0 13.312487397139945 0.0 10 5.52454139400753E-4 0.0 0.0 17.831009803298702 0.0 11 5.52454139400753E-4 0.0 0.0 19.39859842384834 0.0 12 5.52454139400753E-4 0.0 0.0 23.685090091458783 0.0 13 5.52454139400753E-4 0.0 0.0 24.4314556337892 0.0 14 5.52454139400753E-4 0.0 0.0 24.76182320915085 0.0 15 5.52454139400753E-4 0.0 0.0 25.625309029034227 0.0 16 5.52454139400753E-4 0.0 0.0 26.413937313028804 0.0 17 5.52454139400753E-4 0.0 0.0 27.243447203339034 0.0 18 5.52454139400753E-4 0.0 0.0 28.08455863057668 0.0 19 5.52454139400753E-4 0.0 0.0 29.241397598481857 0.0 20 5.52454139400753E-4 0.0 0.0 29.8623560511683 0.0 21 5.52454139400753E-4 0.0 0.0 30.41922982368426 0.0 22 5.52454139400753E-4 0.0 0.0 31.044331682416214 0.0 23 5.52454139400753E-4 0.0 0.0 31.551208355316405 0.0 24 5.52454139400753E-4 0.0 0.0 31.983503719397493 0.0 25 5.52454139400753E-4 0.0 0.0 32.344532499495884 0.0 26 5.52454139400753E-4 0.0 0.0 32.711362048057985 0.0 27 5.52454139400753E-4 0.0 0.0 33.17072766496971 0.0 28 5.52454139400753E-4 0.0 0.0 33.51794509158309 0.0 29 5.52454139400753E-4 0.0 0.0 33.863505155778256 0.0 30 5.52454139400753E-4 0.0 0.0 34.24552719317388 0.0 31 5.52454139400753E-4 0.0 0.0 34.6283779117786 0.0 32 5.52454139400753E-4 0.0 0.0 34.98084365271628 0.0 33 5.52454139400753E-4 0.0 0.0 35.31424972584463 0.0 34 5.52454139400753E-4 0.0 0.0 35.636882943254676 0.0 35 5.52454139400753E-4 0.0 0.0 35.98658641349535 0.0 36 5.52454139400753E-4 0.0 0.0 36.32524080094801 0.0 37 5.52454139400753E-4 0.0 0.0 36.66085669063397 0.0 38 5.52454139400753E-4 0.0 0.0 36.988461995298614 0.0 39 5.52454139400753E-4 0.0 0.0 37.30778048787225 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCCCA 35 1.2088458E-7 45.000004 33 TGATTCG 35 1.2088458E-7 45.000004 15 TCAAGAC 30 2.1613669E-6 45.000004 31 TTTAGCG 40 6.7921064E-9 45.0 1 AAGTATA 20 7.026877E-4 45.0 6 CGTGGCA 20 7.026877E-4 45.0 15 CGAACTG 20 7.026877E-4 45.0 34 ACACGAC 55 1.8189894E-12 45.0 26 GGTAAGT 20 7.026877E-4 45.0 8 CGACGAA 25 3.8854945E-5 45.0 19 TACGGGT 20 7.026877E-4 45.0 4 TATGAGG 40 6.7921064E-9 45.0 2 ACGGCTA 25 3.8854945E-5 45.0 30 GACGCAG 25 3.8854945E-5 45.0 1 GCGTGAG 20 7.026877E-4 45.0 1 CACGTCA 20 7.026877E-4 45.0 11 CGATCAT 25 3.8854945E-5 45.0 10 CCGTTTA 40 6.7921064E-9 45.0 41 TCGAATG 180 0.0 45.0 44 AACACGT 50 2.1827873E-11 45.0 41 >>END_MODULE