SRR3551619_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551619_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	447083
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG	8434	1.8864506143154627	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC	7974	1.7835614416115129	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC	7937	1.775285573372282	No Hit
GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	3444	0.7703267625921809	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3158	0.7063565378240729	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT	1887	0.42206928020076806	No Hit
GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT	1858	0.4155827888781278	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT	1320	0.29524719123742127	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC	1292	0.28898437202935473	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA	1209	0.270419586519729	No Hit
GTGAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC	1021	0.22836922897985384	No Hit
CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT	736	0.16462267632631972	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCC	649	0.14516320235839877	No Hit
GTGAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT	645	0.14426851390010356	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTT	628	0.14046608795234888	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	608	0.1359926456608728	No Hit
CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	536	0.11988825341155893	No Hit
TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	511	0.11429645054721384	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTAGG	50	2.1827873E-11	45.000004	2
CATCGAA	25	3.886968E-5	45.000004	42
CACAACG	25	3.886968E-5	45.000004	12
TCTACGG	35	1.2097007E-7	45.0	2
GTTAACG	20	7.0286565E-4	45.0	1
GTCGTTT	20	7.0286565E-4	45.0	9
CGAATAT	90	0.0	45.0	14
CGATCGA	55	1.8189894E-12	44.999996	41
CGTTTTT	1505	0.0	42.906975	1
GCTACGA	100	0.0	42.750004	10
CCGATCG	65	0.0	41.538464	40
CTTGCGG	65	0.0	41.538464	2
GATCGAA	60	3.6379788E-12	41.249996	42
TACGAGG	45	1.9237632E-8	40.0	2
GATGAAT	750	0.0	39.9	20
ATGAATG	745	0.0	39.56376	21
CGCAAGG	40	3.4518962E-7	39.375	2
ATCGAAT	120	0.0	39.374996	43
CGAATGC	115	0.0	39.130436	45
AGCTACG	110	0.0	38.863632	9