##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551619_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 447083 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.932940863329627 33.0 31.0 34.0 30.0 34.0 2 31.99912767875316 33.0 31.0 34.0 30.0 34.0 3 31.986581909846716 33.0 31.0 34.0 30.0 34.0 4 35.68687245992355 37.0 35.0 37.0 33.0 37.0 5 35.698132114171194 37.0 35.0 37.0 35.0 37.0 6 35.58668077292136 37.0 35.0 37.0 33.0 37.0 7 35.87395628999537 37.0 35.0 37.0 35.0 37.0 8 35.519449408722764 37.0 35.0 37.0 33.0 37.0 9 37.33209046195002 39.0 37.0 39.0 34.0 39.0 10 37.03338306310014 39.0 37.0 39.0 33.0 39.0 11 37.17118297944677 39.0 37.0 39.0 34.0 39.0 12 37.107653388744374 39.0 37.0 39.0 34.0 39.0 13 37.11472813772834 39.0 37.0 39.0 33.0 39.0 14 38.198084024666564 40.0 37.0 41.0 33.0 41.0 15 38.15515239899526 40.0 37.0 41.0 33.0 41.0 16 38.048407119036064 40.0 37.0 41.0 33.0 41.0 17 37.96413417642809 40.0 37.0 41.0 33.0 41.0 18 37.81255382110257 39.0 37.0 41.0 33.0 41.0 19 37.610519746892635 39.0 36.0 41.0 33.0 41.0 20 37.72610902226209 39.0 36.0 41.0 33.0 41.0 21 37.72508013053505 39.0 36.0 41.0 33.0 41.0 22 37.874334295869 40.0 36.0 41.0 33.0 41.0 23 37.8524502161791 40.0 36.0 41.0 33.0 41.0 24 37.746935132850055 40.0 36.0 41.0 33.0 41.0 25 37.49015283515589 39.0 35.0 41.0 33.0 41.0 26 37.65300850177707 39.0 36.0 41.0 33.0 41.0 27 37.69126985369607 40.0 36.0 41.0 33.0 41.0 28 37.5639087149366 40.0 36.0 41.0 33.0 41.0 29 37.620258430761176 40.0 36.0 41.0 33.0 41.0 30 37.362474081993724 40.0 35.0 41.0 33.0 41.0 31 37.37707763435425 39.0 36.0 41.0 33.0 41.0 32 37.18707935662953 40.0 35.0 41.0 32.0 41.0 33 37.08042801895845 40.0 35.0 41.0 32.0 41.0 34 36.894388737661686 40.0 35.0 41.0 31.0 41.0 35 36.796827434726886 40.0 35.0 41.0 31.0 41.0 36 36.6530979706229 40.0 35.0 41.0 31.0 41.0 37 36.60538647186316 39.0 35.0 41.0 31.0 41.0 38 36.581666044112616 39.0 35.0 41.0 30.0 41.0 39 36.48580241252743 39.0 35.0 41.0 30.0 41.0 40 36.40215575184026 39.0 35.0 41.0 30.0 41.0 41 36.23971611535218 39.0 35.0 41.0 30.0 41.0 42 36.20557256706249 39.0 35.0 41.0 30.0 41.0 43 36.2257746324508 39.0 35.0 41.0 30.0 41.0 44 36.372590771735894 39.0 35.0 41.0 30.0 41.0 45 36.34129456946473 39.0 35.0 41.0 30.0 41.0 46 36.25761659468152 39.0 35.0 41.0 30.0 41.0 47 36.14041911680829 39.0 35.0 41.0 30.0 41.0 48 36.13187484203157 39.0 35.0 41.0 30.0 41.0 49 36.13676431445615 39.0 35.0 41.0 30.0 41.0 50 35.9877450048425 39.0 35.0 41.0 30.0 41.0 51 35.17305064160346 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 17.0 11 9.0 12 8.0 13 16.0 14 19.0 15 18.0 16 32.0 17 56.0 18 137.0 19 240.0 20 567.0 21 1189.0 22 1820.0 23 2535.0 24 3063.0 25 3827.0 26 4544.0 27 4979.0 28 5043.0 29 5315.0 30 6144.0 31 8051.0 32 10367.0 33 14758.0 34 25667.0 35 33574.0 36 34352.0 37 50868.0 38 94064.0 39 135748.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.40887038871977 17.267710917212238 21.723706783751563 13.599711910316428 2 29.561848694761377 31.668392669817464 23.550660615590395 15.21909801983077 3 28.71077629880805 30.703023823316922 25.96766148567492 14.618538392200106 4 25.101603058045153 23.52851707624759 34.46653082313575 16.903349042571513 5 29.82309772458358 26.58611488247149 24.47778153049881 19.113005862446123 6 22.910287351565593 37.47357873146597 25.744660387444835 13.8714735295236 7 70.57548598358694 5.9762952292974685 18.56411449328201 4.884104293833583 8 69.04937114584988 12.665433487741652 12.184985785637119 6.100209580771356 9 63.38465117215372 7.425243187506571 14.237401108966344 14.95270453137337 10 39.03346805850368 22.46898226951148 21.798636942133786 16.698912729851056 11 31.507572419438894 22.349988704558214 25.935005356947144 20.207433519055744 12 25.429282705895773 19.637740643236267 31.12486943140312 23.80810721946484 13 24.71509764406162 22.123632524609523 35.50593513956022 17.655334691768644 14 21.178394168420628 28.30033796856512 28.739630001588072 21.78163786142618 15 18.36504631131132 23.615301856702224 37.297548777296385 20.72210305469007 16 20.443183927816534 23.88326104996164 29.762258909419504 25.911296112802322 17 20.867266257048467 25.274277930496126 31.251244176137316 22.607211636318087 18 20.888515107932978 23.986597566894737 30.686024742609312 24.43886258256297 19 20.887620419474683 26.16941373302049 28.229433908245227 24.7135319392596 20 23.97094051887457 25.359944350377894 31.058886157603844 19.61022897314369 21 21.697760818461003 30.50842908363771 28.092322902011485 19.701487195889804 22 20.028272155282128 23.59450035004686 30.371989093747693 26.005238400923318 23 21.655039444577405 28.00688015424429 28.7812330148988 21.556847386279504 24 22.51438770876996 24.875023205981886 28.129228800916163 24.481360284331995 25 19.632372512486494 31.393499641006255 26.56218196621209 22.411945880295157 26 19.628346414424165 24.388312684669287 31.366658987257402 24.616681913649145 27 24.83945933976465 25.93768942232203 26.214819172278975 23.008032065634346 28 18.954869677442442 26.17992632240546 31.309846270155656 23.555357729996445 29 22.66357700919069 23.479980227385074 30.133778291726593 23.722664471697648 30 23.13597251517056 27.00125032712047 28.011800940764914 21.85097621694406 31 24.729412659394338 23.677035360324595 24.186113093094573 27.407438887186498 32 25.03986955442278 29.113609777155474 24.705703415249516 21.14081725317223 33 23.35919728551522 23.72154611112478 24.453401270010268 28.465855333349737 34 24.08009251078659 24.645535616429164 27.267867487692442 24.006504385091805 35 24.0543702176106 26.027158268151553 25.371798972450303 24.546672541787544 36 22.421116436992683 25.526803747849954 28.47927566022416 23.5728041549332 37 23.644155559482243 27.57206156351282 28.070626706897823 20.713156170107116 38 20.11460959150762 26.6731233350407 24.375563374138583 28.836703699313105 39 24.607287684837043 26.896348105385353 26.543393508587894 21.952970701189713 40 21.952076012731418 25.2693571439755 27.97221097648535 24.80635586680773 41 22.261861891416135 25.272935897808686 27.84046810100138 24.6247341097738 42 21.084451880299632 26.09224685349253 30.653815958110687 22.169485308097155 43 22.589765211381334 23.37172292393135 29.426974409673374 24.611537455013945 44 23.122104844066985 22.820594833621495 28.785706457190273 25.27159386512124 45 21.668683443566408 22.574555507590315 27.42175390251922 28.33500714632406 46 25.76411986141276 26.103206787106643 25.82831375829544 22.304359593185158 47 19.58070425401995 24.13668155577376 33.40923273754538 22.873381452660915 48 22.468758597396903 24.55002762350615 27.330272007658536 25.65094177143841 49 21.263836916187824 21.882066640869816 32.797265832071446 24.056830610870914 50 22.191181503210814 21.501600373979777 29.99487790857626 26.31234021423315 51 20.77086357566716 21.645197871536155 28.07152139535612 29.512417157440563 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 288.0 2 467.0 3 2694.0 4 4921.0 5 3269.5 6 1618.0 7 1555.5 8 1493.0 9 1525.5 10 1558.0 11 1591.5 12 1625.0 13 1673.0 14 1721.0 15 1638.5 16 1556.0 17 1493.0 18 1430.0 19 1382.0 20 1334.0 21 1374.0 22 1414.0 23 1469.5 24 1525.0 25 1808.5 26 2588.0 27 3084.0 28 3531.5 29 3979.0 30 4521.5 31 5064.0 32 6145.5 33 7227.0 34 8093.5 35 8960.0 36 9740.0 37 10520.0 38 11260.0 39 12000.0 40 13949.0 41 15898.0 42 18046.0 43 20194.0 44 23701.0 45 27208.0 46 47282.0 47 67356.0 48 56946.5 49 46537.0 50 44794.5 51 43052.0 52 37452.0 53 31852.0 54 28653.5 55 25455.0 56 23028.0 57 20601.0 58 19312.5 59 18024.0 60 16245.0 61 14466.0 62 13389.0 63 12312.0 64 11088.0 65 9864.0 66 8309.0 67 6754.0 68 5682.5 69 4611.0 70 4039.0 71 3467.0 72 3008.5 73 2550.0 74 1967.0 75 1164.0 76 944.0 77 673.5 78 403.0 79 312.5 80 222.0 81 186.5 82 151.0 83 89.0 84 27.0 85 30.5 86 34.0 87 23.5 88 13.0 89 8.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 447083.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.64659903001377 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50890800290286 27.304980757465646 2 8.90950720332536 6.530062760705675 3 3.4304559900935496 3.7714363547720153 4 2.0769809969296467 3.0445715914975606 5 1.5350599497740738 2.8127363233201774 6 1.1631494335301256 2.55752825415397 7 1.02101203256266 2.6191632993500207 8 0.8844232167575307 2.5928882397878543 9 0.762844635144818 2.516009531971436 >10 5.607238710286168 32.94434239160616 >50 0.05510844257555203 1.3925829567827928 >100 0.034289697602565714 2.0747376761865457 >500 0.004286212200320714 0.9678070081540744 >1k 0.004898528228937959 3.4083052740209214 >5k 0.0018369480858517345 5.4628475802251195 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 8434 1.8864506143154627 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 7974 1.7835614416115129 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 7937 1.775285573372282 No Hit GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 3444 0.7703267625921809 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3158 0.7063565378240729 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT 1887 0.42206928020076806 No Hit GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 1858 0.4155827888781278 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT 1320 0.29524719123742127 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 1292 0.28898437202935473 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA 1209 0.270419586519729 No Hit GTGAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 1021 0.22836922897985384 No Hit CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT 736 0.16462267632631972 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCC 649 0.14516320235839877 No Hit GTGAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT 645 0.14426851390010356 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTT 628 0.14046608795234888 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 608 0.1359926456608728 No Hit CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 536 0.11988825341155893 No Hit TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 511 0.11429645054721384 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.473442291476079E-4 0.0 0.0 0.17043815130523862 0.0 2 4.473442291476079E-4 0.0 0.0 1.282312232851618 0.0 3 4.473442291476079E-4 0.0 0.0 1.6538316151587065 0.0 4 4.473442291476079E-4 0.0 0.0 2.5655191541615316 0.0 5 4.473442291476079E-4 0.0 0.0 5.577935193241523 0.0 6 4.473442291476079E-4 0.0 0.0 6.751542778410273 0.0 7 4.473442291476079E-4 0.0 0.0 8.214358407722951 0.0 8 4.473442291476079E-4 0.0 0.0 9.935962673597519 0.0 9 4.473442291476079E-4 0.0 0.0 10.623083409568245 0.0 10 4.473442291476079E-4 0.0 0.0 13.796319699026803 0.0 11 4.473442291476079E-4 0.0 0.0 15.205230348727193 0.0 12 4.473442291476079E-4 0.0 0.0 18.430358568766874 0.0 13 4.473442291476079E-4 0.0 0.0 19.0047485589924 0.0 14 4.473442291476079E-4 0.0 0.0 19.340033058738534 0.0 15 4.473442291476079E-4 0.0 0.0 19.95244730844161 0.0 16 6.710163437214119E-4 0.0 0.0 20.666632370275764 0.0 17 6.710163437214119E-4 0.0 0.0 21.49533755477171 0.0 18 6.710163437214119E-4 0.0 0.0 22.374145292932184 0.0 19 6.710163437214119E-4 0.0 0.0 23.21940221390659 0.0 20 6.710163437214119E-4 0.0 0.0 23.784621647434594 0.0 21 6.710163437214119E-4 0.0 0.0 24.38719432409642 0.0 22 6.710163437214119E-4 0.0 0.0 25.02443617851719 0.0 23 6.710163437214119E-4 0.0 0.0 25.584734825524567 0.0 24 6.710163437214119E-4 0.0 0.0 26.064511511285378 0.0 25 6.710163437214119E-4 0.0 0.0 26.46510826848706 0.0 26 6.710163437214119E-4 0.0 0.0 26.865481353574168 0.0 27 6.710163437214119E-4 0.0 0.0 27.292247748180987 0.0 28 6.710163437214119E-4 0.0 0.0 27.68859473520577 0.0 29 6.710163437214119E-4 0.0 0.0 28.112229720208553 0.0 30 6.710163437214119E-4 0.0 0.0 28.591111717511065 0.0 31 6.710163437214119E-4 0.0 0.0 28.991484802598176 0.0 32 6.710163437214119E-4 0.0 0.0 29.39208155979986 0.0 33 8.946884582952158E-4 0.0 0.0 29.76717969594013 0.0 34 8.946884582952158E-4 0.0 0.0 30.152343077236218 0.0 35 8.946884582952158E-4 0.0 0.0 30.551597801750457 0.0 36 8.946884582952158E-4 0.0 0.0 30.9363138388174 0.0 37 8.946884582952158E-4 0.0 0.0 31.332884497956755 0.0 38 8.946884582952158E-4 0.0 0.0 31.748019942605737 0.0 39 8.946884582952158E-4 0.0 0.0 32.13720942196415 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 50 2.1827873E-11 45.000004 2 CATCGAA 25 3.886968E-5 45.000004 42 CACAACG 25 3.886968E-5 45.000004 12 TCTACGG 35 1.2097007E-7 45.0 2 GTTAACG 20 7.0286565E-4 45.0 1 GTCGTTT 20 7.0286565E-4 45.0 9 CGAATAT 90 0.0 45.0 14 CGATCGA 55 1.8189894E-12 44.999996 41 CGTTTTT 1505 0.0 42.906975 1 GCTACGA 100 0.0 42.750004 10 CCGATCG 65 0.0 41.538464 40 CTTGCGG 65 0.0 41.538464 2 GATCGAA 60 3.6379788E-12 41.249996 42 TACGAGG 45 1.9237632E-8 40.0 2 GATGAAT 750 0.0 39.9 20 ATGAATG 745 0.0 39.56376 21 CGCAAGG 40 3.4518962E-7 39.375 2 ATCGAAT 120 0.0 39.374996 43 CGAATGC 115 0.0 39.130436 45 AGCTACG 110 0.0 38.863632 9 >>END_MODULE