##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551616_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 323602 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83729395986428 33.0 31.0 34.0 30.0 34.0 2 31.961647332216735 33.0 31.0 34.0 30.0 34.0 3 31.900269466814173 33.0 31.0 34.0 30.0 34.0 4 35.596936978139816 37.0 35.0 37.0 33.0 37.0 5 35.61895476542172 37.0 35.0 37.0 33.0 37.0 6 35.493485825180315 37.0 35.0 37.0 33.0 37.0 7 35.78442036823011 37.0 35.0 37.0 35.0 37.0 8 35.46400207662499 37.0 35.0 37.0 33.0 37.0 9 37.23225443600472 39.0 37.0 39.0 34.0 39.0 10 37.00345486121841 39.0 37.0 39.0 33.0 39.0 11 37.11210375708432 39.0 37.0 39.0 34.0 39.0 12 37.06650762356228 39.0 37.0 39.0 33.0 39.0 13 37.10649501548198 39.0 37.0 39.0 33.0 39.0 14 38.210987571152216 40.0 38.0 41.0 33.0 41.0 15 38.20083930260011 40.0 38.0 41.0 33.0 41.0 16 38.065237544885385 40.0 37.0 41.0 33.0 41.0 17 37.96495077286296 40.0 37.0 41.0 33.0 41.0 18 37.73450411307717 39.0 37.0 41.0 33.0 41.0 19 37.45633216111149 39.0 36.0 41.0 33.0 41.0 20 37.43460794432667 39.0 35.0 41.0 32.0 41.0 21 37.43685144096761 39.0 35.0 41.0 33.0 41.0 22 37.5823944227786 39.0 35.0 41.0 33.0 41.0 23 37.520370702282435 39.0 35.0 41.0 33.0 41.0 24 37.41299806552494 39.0 35.0 41.0 33.0 41.0 25 37.12005797244764 39.0 35.0 41.0 32.0 41.0 26 37.2619668605262 39.0 35.0 41.0 33.0 41.0 27 37.27405269435912 39.0 35.0 41.0 33.0 41.0 28 37.13095098299763 39.0 35.0 41.0 32.0 41.0 29 37.139483068707854 39.0 35.0 41.0 32.0 41.0 30 36.84172532926249 39.0 35.0 41.0 31.0 41.0 31 36.726074004486996 39.0 35.0 41.0 31.0 41.0 32 36.414570985346195 39.0 35.0 41.0 30.0 41.0 33 36.10156303113084 39.0 35.0 41.0 29.0 41.0 34 35.83867837652425 39.0 35.0 41.0 27.0 41.0 35 35.628682764630625 39.0 35.0 41.0 25.0 41.0 36 35.46810588315276 39.0 35.0 41.0 24.0 41.0 37 35.39469780780094 39.0 35.0 41.0 23.0 41.0 38 35.19875340696287 39.0 35.0 41.0 23.0 41.0 39 35.08057428569663 39.0 35.0 41.0 23.0 41.0 40 35.017261945229016 38.0 35.0 40.0 23.0 41.0 41 34.850365572524275 38.0 34.0 40.0 22.0 41.0 42 34.81316864543482 38.0 35.0 40.0 22.0 41.0 43 34.84232174090395 38.0 35.0 40.0 22.0 41.0 44 34.960133126494895 38.0 35.0 40.0 22.0 41.0 45 34.9082082310987 38.0 35.0 40.0 23.0 41.0 46 34.79145060908153 38.0 34.0 40.0 23.0 41.0 47 34.60579971693624 38.0 34.0 40.0 22.0 41.0 48 34.55484823950408 37.0 34.0 40.0 22.0 41.0 49 34.45059363044728 37.0 34.0 40.0 22.0 41.0 50 34.320096909166196 37.0 34.0 40.0 22.0 41.0 51 33.44859117063553 36.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 10.0 10 13.0 11 10.0 12 12.0 13 16.0 14 23.0 15 27.0 16 53.0 17 89.0 18 134.0 19 348.0 20 651.0 21 1225.0 22 1941.0 23 2409.0 24 3112.0 25 4226.0 26 5849.0 27 6410.0 28 5810.0 29 5557.0 30 5861.0 31 6832.0 32 8342.0 33 11114.0 34 17971.0 35 23640.0 36 27303.0 37 37754.0 38 65172.0 39 81649.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77817195196569 17.49093021674773 20.857102242878597 19.873795588407983 2 33.681188620589495 31.308211939357605 20.65283898121767 14.357760458835237 3 25.734080753518214 29.738382333854553 30.180283187372144 14.347253725255097 4 24.76931539360078 20.93312155054666 38.5195394342433 15.778023621609261 5 29.007546306883146 23.92846768561381 28.390121198262065 18.673864809240982 6 22.612035772337624 35.242983665119496 28.885791805983896 13.25918875655898 7 66.82128046180185 5.425182786262137 23.25109239127076 4.502444360665262 8 65.63432858882207 11.828727881780706 17.008547536789017 5.528395992608203 9 59.92793616850328 7.154158503346704 18.31570880278861 14.6021965253614 10 37.022329899073554 21.413650101050056 25.473266543470064 16.090753456406325 11 29.753524391072983 20.54715360226451 30.299565515664305 19.3997564909982 12 23.204430133311906 18.382148441604194 35.00071074962454 23.412710675459362 13 23.597505577839446 20.254201148324174 38.85173762832121 17.29655564551517 14 19.200746596127342 27.276407438767375 32.624952874209676 20.897893090895607 15 17.113614872590404 22.04158194325128 39.985537790248515 20.859265393909805 16 18.797164418019666 22.813826861391462 33.21518408415275 25.173824636436116 17 19.106804037057866 25.368199207668678 33.441078856125735 22.083917899147718 18 19.82280702838672 23.276432160493446 32.89843696886916 24.002323842250668 19 20.10834296450578 24.543111600051915 30.57243156717202 24.776113868270283 20 22.82464261654749 24.517153787677458 33.69478556992849 18.963418025846565 21 20.70815384330134 29.18956001508025 31.132996705830003 18.969289435788404 22 19.7891236766151 22.323718642035587 33.597752795100156 24.28940488624916 23 22.010679785662635 25.718320653148 31.83911100673049 20.431888554458872 24 21.941458952664075 24.521480089739867 30.47292661973659 23.064134337859468 25 19.584551393378284 30.565324070926632 28.56966273385208 21.280461801843003 26 19.569100314583963 24.319070957534255 32.779154640577005 23.332674087304774 27 24.97450571998937 23.981928418242163 28.883628654952687 22.15993720681578 28 20.59721509755811 25.399719408409094 32.403693425875 21.5993720681578 29 24.34904605039524 22.19949196852924 30.64227044332235 22.809191537753165 30 21.697640929289683 27.456567017509165 28.563173280758463 22.282618772442692 31 25.23470188688574 23.412710675459362 26.595632907089573 24.756954530565324 32 25.645391561238807 27.812868894506217 25.744587487098347 20.79715205715663 33 22.47112193373341 27.756626967694885 25.57215344775372 24.20009765081798 34 23.839778493334403 24.79372809809581 28.505386246067697 22.861107162502087 35 22.44485509978307 24.54465670793135 26.046501566739387 26.963986625546195 36 23.894166290690418 29.739000377006324 25.117273688048904 21.24955964425436 37 20.553643055358126 27.498902973405603 28.905878208416514 23.04157576281976 38 21.263465615169252 28.537833511535776 25.519928801428915 24.678772071866057 39 22.084535942299492 28.881774525497374 28.62126933702511 20.412420195178026 40 20.452283978467374 26.395386925915165 29.909580286895633 23.242748808721824 41 19.123491202155734 27.57059597901125 28.922874395090265 24.383038423742747 42 20.485040265511337 25.31721064764742 30.106736052311174 24.09101303453007 43 22.861416184077974 26.553296951193133 27.077397543896513 23.50788932083238 44 22.63861162786386 24.078652171494614 29.259089869654698 24.023646330986832 45 21.47823561041032 22.99645861274034 28.35396567388335 27.171340102965992 46 25.225431239609147 26.68957546615905 26.666707869543448 21.418285424688353 47 19.64233842806905 25.18834865050278 33.63452636263064 21.534786558797535 48 21.178175660224596 24.8508970896348 29.13084591566183 24.84008133447877 49 20.342272297451807 23.010364583655228 33.17130302037688 23.476060098516076 50 20.745854475559483 23.133664192433915 31.729717368866694 24.390763963139904 51 20.85772028603037 22.341332871861113 28.822751404503062 27.978195437605454 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 124.0 1 298.5 2 473.0 3 4705.5 4 8938.0 5 5783.0 6 2628.0 7 2594.0 8 2560.0 9 2524.0 10 2488.0 11 2493.5 12 2499.0 13 2438.5 14 2378.0 15 2230.0 16 2082.0 17 1994.0 18 1906.0 19 1901.5 20 1897.0 21 1821.5 22 1746.0 23 1645.0 24 1544.0 25 1754.0 26 2073.0 27 2182.0 28 2787.5 29 3393.0 30 3861.0 31 4329.0 32 4923.5 33 5518.0 34 6028.5 35 6539.0 36 6797.5 37 7056.0 38 7623.5 39 8191.0 40 9179.5 41 10168.0 42 11607.0 43 13046.0 44 14527.0 45 16008.0 46 29914.5 47 43821.0 48 36434.5 49 29048.0 50 28368.5 51 27689.0 52 24449.5 53 21210.0 54 19152.0 55 17094.0 56 15728.0 57 14362.0 58 13596.5 59 12831.0 60 12125.0 61 11419.0 62 10954.0 63 10489.0 64 9199.0 65 7909.0 66 6808.5 67 5708.0 68 4935.5 69 4163.0 70 3505.5 71 2848.0 72 2511.5 73 2175.0 74 1802.0 75 1130.0 76 831.0 77 665.5 78 500.0 79 350.0 80 200.0 81 161.5 82 123.0 83 92.0 84 61.0 85 43.5 86 26.0 87 16.0 88 6.0 89 4.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 323602.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.08933276302805 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49388544523647 32.09891818760687 2 8.66412807644396 7.4666299557477585 3 4.097014031046394 5.296128027556589 4 2.748542484352164 4.737314468862809 5 2.1061584712514287 4.5376481609711625 6 1.5531715269680673 4.015507485815247 7 1.3037691293768332 3.932497930331722 8 1.1055660284847935 3.8110481994304486 9 0.8676305115461946 3.3647057844633204 >10 2.9897541731629054 17.5708593360034 >50 0.03590822557693244 1.0521378069537357 >100 0.025853922415391358 2.3933040585235856 >500 0.003590822557693245 1.2588519407905283 >1k 0.003590822557693245 4.487367746657682 >5k 0.001436329023077298 3.9770809102851206 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC 6710 2.073534774197934 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6142 1.8980105190944432 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC 4996 1.5438717931285963 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG 4976 1.5376913616108676 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1792 0.5537666639884797 No Hit GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 1569 0.4848548525658062 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCT 1168 0.3609372006353484 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC 925 0.2858449576949462 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT 887 0.27410213781126197 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA 771 0.2382556350084363 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT 743 0.2296030308836163 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCC 742 0.22929400930772986 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 469 0.14493111909073492 No Hit CGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 434 0.13411536393470994 No Hit CCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 427 0.13195221290350492 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCAACCATCGAATGC 376 0.11619211253329707 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT 352 0.10877559471202279 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0902157588642837E-4 0.0 0.0 0.07972756657869852 0.0 2 3.0902157588642837E-4 0.0 0.0 0.9029610447401437 0.0 3 3.0902157588642837E-4 0.0 0.0 1.2972725755712264 0.0 4 3.0902157588642837E-4 0.0 0.0 2.199615577159597 0.0 5 3.0902157588642837E-4 0.0 0.0 5.312080889487704 0.0 6 3.0902157588642837E-4 0.0 0.0 6.632530083250413 0.0 7 3.0902157588642837E-4 0.0 0.0 7.797232402766361 0.0 8 3.0902157588642837E-4 0.0 0.0 9.272810427624057 0.0 9 3.0902157588642837E-4 0.0 0.0 9.953893980877744 0.0 10 3.0902157588642837E-4 0.0 0.0 12.589539001613092 0.0 11 3.0902157588642837E-4 0.0 0.0 13.861780829537519 0.0 12 3.0902157588642837E-4 0.0 0.0 16.4056464422346 0.0 13 3.0902157588642837E-4 0.0 0.0 16.94797930791528 0.0 14 3.0902157588642837E-4 0.0 0.0 17.196741676503855 0.0 15 3.0902157588642837E-4 0.0 0.0 17.701991953078164 0.0 16 6.180431517728567E-4 0.0 0.0 18.219603092687933 0.0 17 6.180431517728567E-4 0.0 0.0 18.809525281055123 0.0 18 6.180431517728567E-4 0.0 0.0 19.44240146847053 0.0 19 6.180431517728567E-4 0.0 0.0 20.137700014214992 0.0 20 6.180431517728567E-4 0.0 0.0 20.571257285183652 0.0 21 6.180431517728567E-4 0.0 0.0 20.980092830081396 0.0 22 6.180431517728567E-4 0.0 0.0 21.440534978152176 0.0 23 6.180431517728567E-4 0.0 0.0 21.8339194442556 0.0 24 6.180431517728567E-4 0.0 0.0 22.170752961971804 0.0 25 6.180431517728567E-4 0.0 0.0 22.480701602585892 0.0 26 6.180431517728567E-4 0.0 0.0 22.761602215066656 0.0 27 6.180431517728567E-4 0.0 0.0 23.095654538599884 0.0 28 6.180431517728567E-4 0.0 0.0 23.370683741138805 0.0 29 6.180431517728567E-4 0.0 0.0 23.667653475565665 0.0 30 6.180431517728567E-4 0.0 0.0 24.02704556832158 0.0 31 6.180431517728567E-4 0.0 0.0 24.347500942515808 0.0 32 6.180431517728567E-4 0.0 0.0 24.635818072817845 0.0 33 6.180431517728567E-4 0.0 0.0 24.92351715996811 0.0 34 6.180431517728567E-4 0.0 0.0 25.211216247118372 0.0 35 6.180431517728567E-4 0.0 0.0 25.49458903220623 0.0 36 6.180431517728567E-4 0.0 0.0 25.769000191593378 0.0 37 6.180431517728567E-4 0.0 0.0 26.067515033899667 0.0 38 6.180431517728567E-4 0.0 0.0 26.345325430621568 0.0 39 6.180431517728567E-4 0.0 0.0 26.63580571195481 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATTA 20 7.0257665E-4 45.000004 8 TCGAATA 20 7.0257665E-4 45.000004 44 GCGTAAG 20 7.0257665E-4 45.000004 1 AAACGAT 35 1.2083183E-7 45.0 16 CTACGAA 50 2.1827873E-11 45.0 11 CTCGAGG 30 2.160652E-6 44.999996 2 CCGCGAA 65 0.0 44.999996 41 CATCGAA 175 0.0 43.714287 42 ATCGAAT 175 0.0 43.714287 43 CGTTTTT 2745 0.0 42.95082 1 TCGAATG 160 0.0 42.187504 44 CCGATGA 715 0.0 42.16783 18 CTCATGC 75 0.0 42.0 23 GATGAAT 800 0.0 41.90625 20 ACCCGCG 70 0.0 41.785713 39 CCCGCGA 70 0.0 41.785713 40 CACCCGC 65 0.0 41.53846 38 CGATGAA 775 0.0 41.516125 19 TACGAAT 55 6.002665E-11 40.909092 12 ATGAATG 805 0.0 40.807453 21 >>END_MODULE