##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551605_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 744863 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02494552689555 33.0 31.0 34.0 30.0 34.0 2 32.12548884828485 33.0 31.0 34.0 30.0 34.0 3 32.09154703616638 33.0 31.0 34.0 30.0 34.0 4 35.73835591242953 37.0 35.0 37.0 35.0 37.0 5 35.78680911791833 37.0 35.0 37.0 35.0 37.0 6 35.69252332308089 37.0 35.0 37.0 35.0 37.0 7 36.00393897938279 37.0 35.0 37.0 35.0 37.0 8 35.795873872108025 37.0 35.0 37.0 35.0 37.0 9 37.65522518906161 39.0 38.0 39.0 35.0 39.0 10 37.244262367710576 39.0 37.0 39.0 34.0 39.0 11 37.330766865853185 39.0 37.0 39.0 34.0 39.0 12 37.29771246524529 39.0 37.0 39.0 34.0 39.0 13 37.35318709615057 39.0 37.0 39.0 34.0 39.0 14 38.46098678548941 40.0 38.0 41.0 34.0 41.0 15 38.49239927342344 40.0 38.0 41.0 34.0 41.0 16 38.32555785426313 40.0 38.0 41.0 34.0 41.0 17 38.29700763764612 40.0 38.0 41.0 34.0 41.0 18 38.11486407567566 40.0 37.0 41.0 34.0 41.0 19 37.91665984214547 40.0 37.0 41.0 34.0 41.0 20 38.07704235543986 40.0 37.0 41.0 34.0 41.0 21 38.021009232570286 40.0 37.0 41.0 34.0 41.0 22 38.19626562200029 40.0 37.0 41.0 34.0 41.0 23 38.194462605875174 40.0 37.0 41.0 34.0 41.0 24 38.08319516474842 40.0 37.0 41.0 34.0 41.0 25 37.77224268086883 40.0 36.0 41.0 33.0 41.0 26 37.93679643102154 40.0 36.0 41.0 34.0 41.0 27 37.98044741113466 40.0 36.0 41.0 34.0 41.0 28 37.91126287652897 40.0 36.0 41.0 34.0 41.0 29 37.94264448630151 40.0 36.0 41.0 34.0 41.0 30 37.637338678387835 40.0 36.0 41.0 33.0 41.0 31 37.51391732439388 40.0 36.0 41.0 33.0 41.0 32 37.45865078544645 40.0 36.0 41.0 33.0 41.0 33 37.36445628256471 40.0 36.0 41.0 33.0 41.0 34 37.158681529355064 40.0 36.0 41.0 32.0 41.0 35 37.07966834169505 40.0 36.0 41.0 32.0 41.0 36 36.920145046807264 40.0 35.0 41.0 31.0 41.0 37 36.883330223141705 40.0 35.0 41.0 31.0 41.0 38 36.7404515998244 39.0 35.0 41.0 31.0 41.0 39 36.69112709317015 39.0 35.0 41.0 31.0 41.0 40 36.59335609367092 39.0 35.0 41.0 31.0 41.0 41 36.40853552935238 39.0 35.0 41.0 30.0 41.0 42 36.480155411129296 39.0 35.0 41.0 30.0 41.0 43 36.45746533255109 39.0 35.0 41.0 31.0 41.0 44 36.53151116379791 39.0 35.0 41.0 31.0 41.0 45 36.541300883518176 39.0 35.0 41.0 31.0 41.0 46 36.44879125423064 39.0 35.0 41.0 31.0 41.0 47 36.338303822313634 39.0 35.0 41.0 30.0 41.0 48 36.308824575794475 39.0 35.0 41.0 31.0 41.0 49 36.305732732059454 39.0 35.0 41.0 31.0 41.0 50 36.13641031975008 39.0 35.0 41.0 30.0 41.0 51 35.32791936235254 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 19.0 10 23.0 11 26.0 12 30.0 13 36.0 14 31.0 15 45.0 16 66.0 17 110.0 18 206.0 19 465.0 20 922.0 21 1555.0 22 2044.0 23 2679.0 24 3740.0 25 5360.0 26 7135.0 27 8608.0 28 8978.0 29 8961.0 30 9925.0 31 12075.0 32 15571.0 33 21816.0 34 38501.0 35 51698.0 36 53691.0 37 82924.0 38 159225.0 39 248286.0 40 104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.45971943833967 18.62355896319189 23.679522274565926 13.237199323902516 2 33.36089992387862 26.37693105980563 24.51645470375089 15.745714312564859 3 30.987040569876605 25.669284150239708 27.995752239002343 15.347923040881343 4 26.410628531689724 23.947759520878336 31.843842424714342 17.797769522717598 5 27.50465521847642 27.482234988179034 26.04411818012171 18.968991613222837 6 24.990904367648817 35.4206075479652 25.171742991664235 14.41674509272175 7 76.41620002604506 5.15155135910899 14.371501873498884 4.060746741347066 8 77.31663406559328 7.729743590432066 10.438295364382444 4.515326979592221 9 71.60054936276873 7.119967027493647 12.096049877628504 9.183433732109126 10 36.23632802273707 27.85653200655691 19.939774159811936 15.967365810894085 11 28.29607592268645 24.586131946411623 28.106510861728935 19.01128126917299 12 25.232962303134936 21.532550281058395 31.82934311410286 21.405144301703803 13 24.643860683105483 22.74753880915014 33.71237395333102 18.89622655441336 14 20.8137603827818 28.045828561762363 30.045659403138565 21.094751652317274 15 18.408351602912212 24.707630799220794 35.3714709953374 21.512546602529593 16 20.605131413427706 23.084110769362955 33.01345348070719 23.297304336502147 17 20.395294168189317 23.88506342777128 32.240559673389605 23.479082730649797 18 21.16536866511023 23.474383879988668 31.860489781342338 23.49975767355876 19 22.454464780771765 25.419305295067684 29.536169738596225 22.590060185564326 20 24.183104812562846 24.7438790757495 31.375165634485803 19.697850477201847 21 22.581333748622228 27.02121061188433 30.22354446388128 20.17391117561216 22 21.261225218597247 22.628993519613676 30.997109535579025 25.112671726210056 23 20.94680498292975 26.895818425670225 30.44506170933447 21.712314882065563 24 21.584908902710968 25.345331960373922 30.16850078470806 22.901258352207048 25 20.910556706401042 28.09832143629097 28.49705247810671 22.494069379201274 26 20.439866123032022 26.036197260435813 30.30785527002952 23.216081346502644 27 22.304772823995823 25.94866438526279 29.757015719669255 21.98954707107213 28 19.782295536226123 26.31396646094651 32.092210245373984 21.811527757453383 29 22.22891994903761 23.735774229623434 30.98838309863693 23.046922722702025 30 22.011967301369513 25.597190355810394 31.479345866286824 20.911496476533266 31 22.539715357052238 27.013692450826525 26.975296128281308 23.471296063839926 32 23.129756747213918 27.572989932376828 27.312807858626353 21.984445461782904 33 23.74154710329282 25.349225293778854 27.27374027170097 23.635487331227353 34 22.626174209216998 26.766264400299118 27.999377066655214 22.608184323828677 35 22.364381100954137 25.51784690607535 28.36239684344638 23.75537514952414 36 24.66037378685745 27.52935774766635 27.12257153328867 20.68769693218753 37 20.607547965196286 27.278170616610037 29.564631348315057 22.54965006987862 38 21.74225327342075 28.50067730575958 26.251404620715483 23.50566480010418 39 23.50459077709592 25.52711035452157 26.952741645107892 24.015557223274616 40 22.981273066322263 25.805819325164492 29.837701698164633 21.375205910348612 41 21.21235717172151 27.557282345881056 28.196057530042438 23.034302952354995 42 21.999884542526612 27.238566018180528 29.058363752797494 21.70318568649537 43 23.852037220267352 25.62981380468623 27.564532001186798 22.95361697385962 44 22.201800868079097 24.851549882327355 29.726943075438033 23.219706174155515 45 21.923494656064268 24.346087804065984 28.555452479180737 25.174965060689015 46 24.32608412553718 26.108291054865123 27.82471407493727 21.74091074466043 47 20.54203256169255 26.37209795626847 31.446856670287023 21.63901281175196 48 21.521407292347718 26.44190945180523 28.487117765280328 23.54956549056672 49 21.56114614365326 24.377905735685623 31.089878272917304 22.971069847743813 50 21.72063856037956 23.484855604319183 30.154404232724673 24.640101602576582 51 21.192084987440644 23.86116641583754 28.47543776506552 26.471310831656293 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 216.0 1 673.0 2 1130.0 3 6189.5 4 11249.0 5 7412.5 6 3576.0 7 3490.0 8 3404.0 9 3294.5 10 3185.0 11 3111.5 12 3038.0 13 2864.0 14 2690.0 15 2452.5 16 2215.0 17 2206.0 18 2197.0 19 2164.0 20 2131.0 21 2296.0 22 2461.0 23 2684.5 24 2908.0 25 3587.0 26 5197.0 27 6128.0 28 7303.0 29 8478.0 30 9855.0 31 11232.0 32 12886.5 33 14541.0 34 16968.5 35 19396.0 36 20799.0 37 22202.0 38 24147.5 39 26093.0 40 27863.5 41 29634.0 42 33153.5 43 36673.0 44 41122.5 45 45572.0 46 63665.0 47 81758.0 48 77587.0 49 73416.0 50 71743.5 51 70071.0 52 61319.0 53 52567.0 54 47591.5 55 42616.0 56 38944.5 57 35273.0 58 33036.5 59 30800.0 60 29108.5 61 27417.0 62 24860.5 63 22304.0 64 18793.0 65 15282.0 66 12312.0 67 9342.0 68 7870.5 69 6399.0 70 5644.5 71 4890.0 72 4288.5 73 3687.0 74 2945.5 75 1587.0 76 970.0 77 840.0 78 710.0 79 512.0 80 314.0 81 228.0 82 142.0 83 105.0 84 68.0 85 40.0 86 12.0 87 7.0 88 2.0 89 1.0 90 0.0 91 1.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 744863.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.032870522762906 #Duplication Level Percentage of deduplicated Percentage of total 1 73.52415805610988 22.816656772504135 2 9.211987097218689 5.717488056907002 3 3.26466971635295 3.039362178214986 4 1.73825497795165 2.1577216666528662 5 1.163414790972826 1.8052050286263492 6 0.9583981897467931 1.7845108158997554 7 0.7999789455794826 1.7377950127373136 8 0.6866861219536858 1.7047873209893531 9 0.5989483432778877 1.6728377748089436 >10 7.9016284274300075 47.597058675268364 >50 0.10444149004132659 2.186269972138555 >100 0.04003590449143521 2.251632542354604 >500 0.0021758643745345223 0.4803608800548988 >1k 0.0034813829992552357 1.5650554509294974 >5k 0.0017406914996276179 3.4832578519134114 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7039 0.9450059943909149 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCG 6578 0.8831154185400536 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGC 6570 0.8820413955317957 No Hit GAATCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTC 5606 0.7526216230367195 No Hit GCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGC 2950 0.3960459842950985 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTACGAAGT 1463 0.19641195763516242 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCT 1415 0.18996781958561507 No Hit GAACTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCT 1341 0.18003310675922957 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTACGAAGTCGTA 1279 0.17170942844523088 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 1075 0.14432184173465457 No Hit CTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGCT 1060 0.142308048594171 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTC 1006 0.13505839328843022 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCC 877 0.11773977228027167 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 799 0.1072680479497572 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.342528760322368E-4 0.0 0.0 0.1484836808916539 0.0 2 1.342528760322368E-4 0.0 0.0 0.7923604743422616 0.0 3 1.342528760322368E-4 0.0 0.0 0.9928000182583911 0.0 4 1.342528760322368E-4 0.0 0.0 1.5018869241726331 0.0 5 1.342528760322368E-4 0.0 0.0 3.147021667071663 0.0 6 1.342528760322368E-4 0.0 0.0 3.8039209894973975 0.0 7 1.342528760322368E-4 0.0 0.0 4.5368074397573785 0.0 8 1.342528760322368E-4 0.0 0.0 5.578341252015472 0.0 9 1.342528760322368E-4 0.0 0.0 5.967406086756894 0.0 10 1.342528760322368E-4 0.0 0.0 7.7194061189775836 0.0 11 1.342528760322368E-4 0.0 0.0 8.940436026490778 0.0 12 1.342528760322368E-4 0.0 0.0 10.823466865718931 0.0 13 1.342528760322368E-4 0.0 0.0 11.263682046228634 0.0 14 1.342528760322368E-4 0.0 0.0 11.446400210508509 0.0 15 1.342528760322368E-4 0.0 0.0 11.908767115563533 0.0 16 1.342528760322368E-4 0.0 0.0 12.545931265212529 0.0 17 1.342528760322368E-4 0.0 0.0 13.29385403758812 0.0 18 1.342528760322368E-4 0.0 0.0 14.09145037409564 0.0 19 1.342528760322368E-4 0.0 0.0 14.769561650934467 0.0 20 1.342528760322368E-4 0.0 0.0 15.257973613939745 0.0 21 1.342528760322368E-4 0.0 0.0 15.8225069576553 0.0 22 1.342528760322368E-4 0.0 0.0 16.45268995775062 0.0 23 1.342528760322368E-4 0.0 0.0 17.04702743994533 0.0 24 1.342528760322368E-4 0.0 0.0 17.500802160934292 0.0 25 1.342528760322368E-4 0.0 0.0 17.910676191460713 0.0 26 1.342528760322368E-4 0.0 0.0 18.294370911160843 0.0 27 1.342528760322368E-4 0.0 0.0 18.699680343902166 0.0 28 2.685057520644736E-4 0.0 0.0 19.103244489255072 0.0 29 2.685057520644736E-4 0.0 0.0 19.515669324426103 0.0 30 2.685057520644736E-4 0.0 0.0 19.9729346201919 0.0 31 2.685057520644736E-4 0.0 0.0 20.408182444288414 0.0 32 2.685057520644736E-4 0.0 0.0 20.8179222219388 0.0 33 2.685057520644736E-4 0.0 0.0 21.23383763188667 0.0 34 2.685057520644736E-4 0.0 0.0 21.632837179454476 0.0 35 2.685057520644736E-4 0.0 0.0 22.07238109558402 0.0 36 2.685057520644736E-4 0.0 0.0 22.497559953978115 0.0 37 2.685057520644736E-4 0.0 0.0 22.937506628735754 0.0 38 2.685057520644736E-4 0.0 0.0 23.340802268336592 0.0 39 4.027586280967104E-4 0.0 0.0 23.748393999970464 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 20 7.031686E-4 45.0 40 CGGCACA 20 7.031686E-4 45.0 9 CGCGTCA 20 7.031686E-4 45.0 39 CGATCGA 20 7.031686E-4 45.0 41 CGAATAT 105 0.0 42.857143 14 CGAAAGG 95 0.0 42.63158 2 CGTTTTT 2935 0.0 42.316868 1 TACGGCT 940 0.0 41.888298 7 ACACGAC 140 0.0 41.785717 26 AAACACG 135 0.0 41.666664 40 ACGGCTG 960 0.0 41.249996 8 TAGCGCG 55 6.002665E-11 40.909092 1 GTTAGCG 55 6.002665E-11 40.909092 1 GCTACGA 110 0.0 40.909092 10 CACGACG 45 1.9266736E-8 40.000004 26 CGTCATA 45 1.9266736E-8 40.000004 38 TCGACAA 40 3.4560435E-7 39.375 19 CTACGAA 115 0.0 39.130436 11 CGAGACA 150 0.0 39.0 22 CCGATGA 680 0.0 38.713234 18 >>END_MODULE