SRR3551587_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551587_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	689133
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC	14021	2.0345854864010287	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG	13474	1.9552103875449298	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC	12869	1.8674189162324255	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7092	1.0291191976004632	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	3987	0.5785530514429	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT	2691	0.39049066000322147	No Hit
GAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	2629	0.381493848067064	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACACAAAT	2502	0.363064894584935	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC	2074	0.3009578702514609	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACACAAATCGTA	2051	0.29762034324288633	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT	898	0.13030866320434517	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	898	0.13030866320434517	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT	884	0.12827712502521282	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC	736	0.10680086427438534	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAACC	30	2.1642318E-6	45.000004	33
ATTCGTT	20	7.0313166E-4	45.000004	36
CGAATAC	20	7.0313166E-4	45.000004	45
ACGTAAG	20	7.0313166E-4	45.000004	1
GCGTACT	20	7.0313166E-4	45.000004	38
AACCGAT	25	3.8891747E-5	45.0	16
ATCTCGT	25	3.8891747E-5	45.0	15
CGCATCG	25	3.8891747E-5	45.0	21
CACGACG	55	1.8189894E-12	45.0	26
TGCGATG	25	3.8891747E-5	45.0	1
CGATCGA	35	1.210974E-7	45.0	41
TCGAATG	225	0.0	43.0	44
CGTTCAT	85	0.0	42.35294	17
CGTTTTT	3380	0.0	41.738167	1
GATGAAT	1685	0.0	41.39466	20
TACGGCT	1640	0.0	41.158535	7
CGATGAA	1590	0.0	41.037735	19
CCGATGA	1525	0.0	41.016396	18
TCGTAAG	55	6.002665E-11	40.909092	42
CAATCGA	55	6.002665E-11	40.909092	41