SRR3551577_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551577_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	731212
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11523	1.5758767635104456	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1254	0.17149609142081912	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1228	0.16794035108833005	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	990	0.13539165112169932	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG	896	0.12253628222731573	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC	825	0.11282637593474944	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCC	734	0.10038128477103767	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAACA	20	7.0316E-4	45.000004	20
TCGAACG	20	7.0316E-4	45.000004	1
CGTTTTT	4610	0.0	42.706074	1
TACGAAT	75	0.0	42.0	12
TACGGGA	155	0.0	40.64516	4
TATAGCG	50	1.0804797E-9	40.5	1
GCGTAAG	50	1.0804797E-9	40.5	1
GTTAGCG	45	1.9266736E-8	40.0	1
CTAACGG	45	1.9266736E-8	40.0	2
TCGACAC	45	1.9266736E-8	40.0	34
CGAATAT	80	0.0	39.375004	14
ACGGGCT	245	0.0	37.65306	5
ATTAGCG	30	1.13951566E-4	37.500004	1
ATTACGG	30	1.13951566E-4	37.500004	2
CGTAAGA	30	1.13951566E-4	37.500004	12
AATATAC	85	0.0	37.058823	16
TATTAGT	55	2.746674E-9	36.818184	30
GTTTTTT	5590	0.0	36.426655	2
CGTTACC	50	4.8748916E-8	36.0	37
CGTTAAA	25	0.0021066084	36.0	36