##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551565_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 666982 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35417297618226 33.0 31.0 34.0 31.0 34.0 2 32.50969141596025 34.0 31.0 34.0 31.0 34.0 3 32.44306443052436 34.0 31.0 34.0 31.0 34.0 4 36.00200155326531 37.0 35.0 37.0 35.0 37.0 5 36.08899040753723 37.0 35.0 37.0 35.0 37.0 6 36.093306865852455 37.0 36.0 37.0 35.0 37.0 7 36.21920831446726 37.0 37.0 37.0 35.0 37.0 8 36.147156894788765 37.0 37.0 37.0 35.0 37.0 9 37.97955716945884 39.0 38.0 39.0 35.0 39.0 10 37.74986431417939 39.0 38.0 39.0 35.0 39.0 11 37.69723620727396 39.0 37.0 39.0 35.0 39.0 12 37.61791772491611 39.0 37.0 39.0 35.0 39.0 13 37.606022351427775 39.0 37.0 39.0 35.0 39.0 14 38.94735090302287 40.0 38.0 41.0 35.0 41.0 15 38.98713008746863 40.0 38.0 41.0 35.0 41.0 16 38.99428620262616 40.0 38.0 41.0 35.0 41.0 17 38.91046984776201 40.0 38.0 41.0 35.0 41.0 18 38.69037545241101 40.0 38.0 41.0 35.0 41.0 19 38.45521918132723 40.0 37.0 41.0 35.0 41.0 20 38.22995972904816 40.0 35.0 41.0 35.0 41.0 21 38.122736445661204 40.0 35.0 41.0 34.0 41.0 22 38.10239106902435 40.0 35.0 41.0 34.0 41.0 23 38.0679643528611 40.0 35.0 41.0 34.0 41.0 24 37.98639543495926 40.0 35.0 41.0 34.0 41.0 25 37.87748245080077 40.0 35.0 41.0 34.0 41.0 26 37.88158151194485 40.0 35.0 41.0 34.0 41.0 27 37.86634271989349 40.0 35.0 41.0 34.0 41.0 28 37.74735300203004 40.0 35.0 41.0 34.0 41.0 29 37.64934286082683 40.0 35.0 41.0 34.0 41.0 30 37.433681868476214 40.0 35.0 41.0 33.0 41.0 31 37.24560183033425 40.0 35.0 41.0 33.0 41.0 32 36.91551796000492 39.0 35.0 41.0 32.0 41.0 33 36.59583017232849 39.0 35.0 41.0 31.0 41.0 34 36.247137104149736 39.0 35.0 41.0 30.0 41.0 35 36.046825851372304 39.0 35.0 41.0 29.0 41.0 36 35.88569406670645 39.0 35.0 41.0 27.0 41.0 37 35.801855222479766 39.0 35.0 41.0 27.0 41.0 38 35.625546116686806 39.0 35.0 41.0 25.0 41.0 39 35.611364324674426 39.0 35.0 41.0 25.0 41.0 40 35.530081771322166 39.0 35.0 41.0 25.0 41.0 41 35.41677886359752 39.0 35.0 41.0 24.0 41.0 42 35.32410319918679 39.0 35.0 41.0 24.0 41.0 43 35.293438203729636 39.0 35.0 41.0 23.0 41.0 44 35.22753387647643 38.0 35.0 41.0 23.0 41.0 45 35.12639021742716 38.0 35.0 41.0 23.0 41.0 46 35.07607401698996 38.0 35.0 41.0 23.0 41.0 47 35.01582051689551 38.0 35.0 41.0 23.0 41.0 48 34.963802621360095 38.0 35.0 40.0 23.0 41.0 49 34.90910849168343 37.0 35.0 40.0 24.0 41.0 50 34.8388577202983 37.0 35.0 40.0 24.0 41.0 51 34.0674695868854 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 14.0 10 12.0 11 14.0 12 13.0 13 14.0 14 32.0 15 40.0 16 62.0 17 108.0 18 195.0 19 326.0 20 585.0 21 917.0 22 1384.0 23 2229.0 24 3621.0 25 6430.0 26 10477.0 27 13748.0 28 13311.0 29 11953.0 30 11419.0 31 11807.0 32 13350.0 33 17586.0 34 34177.0 35 49193.0 36 49845.0 37 64741.0 38 119898.0 39 229210.0 40 265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.329193291573084 18.252516559667278 22.191753300688774 22.226536848070864 2 39.48127535675626 22.31679415636404 22.17945911583821 16.022471371041497 3 28.81502049530572 22.153521384385186 33.71500280367386 15.31645531663523 4 26.31180451646371 22.316644227280495 34.25999502235443 17.111556233901364 5 24.04982443304317 25.717185771130257 31.71030102761394 18.522688768212635 6 24.43978997933977 30.39362381593506 30.997088377197585 14.16949782752758 7 70.82484984602283 5.706300919664999 18.754329202287316 4.714520032024852 8 71.59218689559839 5.590705596252973 17.933317540803202 4.883789967345446 9 65.22694765375977 7.194796861084707 20.128429252963347 7.449826232192174 10 35.509953791856454 23.570201294787566 25.779256411717256 15.140588501638724 11 27.52098257524191 21.523969162586095 32.01900501062997 18.93604325154202 12 24.48866686057495 18.875921689041082 36.21836871159941 20.417042738784556 13 23.02910723227913 19.214761417849356 38.451562410979605 19.304568938891904 14 20.353772665529206 22.15711968239023 36.94897313570681 20.540134516373758 15 19.66454866847981 21.208518370810605 38.89235391659745 20.234579044112134 16 22.602858847765006 21.201021916633433 36.28628658644461 19.90983264915695 17 22.245277983513798 21.72592363811917 34.792393198017336 21.236405180349692 18 22.952193612421325 21.395479937989332 34.29133020081501 21.36099624877433 19 22.802264528877842 23.275440716541077 33.28665541199013 20.635639342590956 20 23.521474342635933 23.108269788390093 33.517846058814186 19.852409810159795 21 23.3048268169156 23.80094215436099 33.690114575805644 19.20411645291777 22 21.63176817365386 21.648710160094275 34.20422140327625 22.515300262975614 23 21.960112866614093 22.721602681931447 34.04934465997583 21.26893979147863 24 22.466723239907523 21.857411444386805 34.15639402562588 21.519471290079792 25 22.793868500199405 22.813059422892973 32.64750772884425 21.745564348063365 26 21.286331565169675 22.603608493182726 33.48366222776627 22.626397713881335 27 22.92880467538854 21.494583062211575 33.31694108686592 22.259671175533974 28 22.186055995514124 22.501356858206066 33.66552620610451 21.647060940175297 29 23.90049506583386 21.860410026057675 32.02785082655904 22.211244081549427 30 24.43978997933977 21.489335544287552 32.380633960136855 21.69024051623582 31 24.481320335481318 22.60690693302068 31.018978023394933 21.892794708103068 32 23.914888257854034 23.127760569250743 31.093492777916044 21.863858394979175 33 23.306026249583947 22.769879846832445 30.031994866428178 23.892099037155425 34 22.31259614202482 23.700189810219765 31.13157476513609 22.85563928261932 35 22.7445418317136 24.38251706942616 29.746379962277842 23.126561136582396 36 21.962061944700157 26.434896294052912 29.50619357044118 22.096848190805748 37 22.281560821731322 26.314953027218124 30.03349415726361 21.36999199378694 38 21.18407993019302 26.359332035947 29.64772662530623 22.808861408553753 39 22.223688195483536 24.430494376160077 29.752377125619585 23.593440302736806 40 22.124735000344835 24.49556359841795 31.26980938016318 22.10989202107403 41 20.500853096485365 25.752269176679434 31.00113646245326 22.745741264381948 42 21.102218650578276 25.71793541654797 30.642656023700788 22.537189909172962 43 22.38381245670798 22.963438293687087 31.580912228515913 23.071837021089024 44 22.888023964664715 23.038102977291743 30.652551343214657 23.421321714828885 45 22.649636721830575 22.501506787289614 30.33545133152019 24.51340515935962 46 22.630595728220552 23.813086410128008 30.141143239247835 23.415174622403605 47 21.737318248468473 23.658959312245308 32.53850928510814 22.065213154178075 48 21.21601482498778 22.967336449859214 32.52201708591836 23.29463163923464 49 21.23235709509402 22.541537852595724 32.85530943863553 23.370795613674733 50 20.504901181741037 21.98680024348483 33.710355002084015 23.797943572690116 51 21.026354534305273 22.260720679118776 31.86097975657514 24.85194503000081 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 325.0 1 817.5 2 1310.0 3 14860.0 4 28410.0 5 17736.0 6 7062.0 7 6831.5 8 6601.0 9 6410.5 10 6220.0 11 6014.5 12 5809.0 13 5545.0 14 5281.0 15 4934.5 16 4588.0 17 4214.5 18 3841.0 19 3602.0 20 3363.0 21 3285.5 22 3208.0 23 3173.5 24 3139.0 25 3552.5 26 4475.5 27 4985.0 28 5581.0 29 6177.0 30 6971.5 31 7766.0 32 8520.0 33 9274.0 34 10283.5 35 11293.0 36 12143.0 37 12993.0 38 13899.0 39 14805.0 40 17066.0 41 19327.0 42 21727.5 43 24128.0 44 27312.5 45 30497.0 46 40432.5 47 50368.0 48 54003.0 49 57638.0 50 57019.5 51 56401.0 52 51441.5 53 46482.0 54 43193.0 55 39904.0 56 37587.0 57 35270.0 58 33944.0 59 32618.0 60 31443.0 61 30268.0 62 28455.0 63 26642.0 64 24084.5 65 21527.0 66 18261.5 67 14996.0 68 12764.0 69 10532.0 70 8838.5 71 7145.0 72 6115.0 73 5085.0 74 4296.0 75 2819.5 76 2132.0 77 1597.0 78 1062.0 79 867.0 80 672.0 81 449.0 82 226.0 83 157.5 84 89.0 85 63.0 86 37.0 87 22.0 88 7.0 89 4.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 666982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.47265645702093 #Duplication Level Percentage of deduplicated Percentage of total 1 71.75843691302562 26.172208174215932 2 7.899519796023831 5.762329433916265 3 3.717869874774292 4.068017720836505 4 2.563837201426087 3.740398138373745 5 2.118998504042487 3.8642752235441455 6 1.754947779946497 3.840456448680009 7 1.5685804284065816 4.004720656333598 8 1.32223385212079 3.8580304835395984 9 1.1644050492954972 3.8222050805797667 >10 6.038130783129151 31.91132198781219 >50 0.052929318697784195 1.3347409974543458 >100 0.03266731370930113 2.309026506909734 >500 0.003721592701059621 1.0091245171608771 >1k 0.003308082400941885 1.4443858168957884 >5k 0.0 0.0 >10k+ 4.1351030011773564E-4 2.8587588137474853 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18955 2.841905778566738 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 1679 0.2517309312695095 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTT 1405 0.2106503623785949 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCC 1156 0.1733180205762674 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 1152 0.17271830424209347 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 1061 0.15907475763963644 No Hit GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 1058 0.158624970389006 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC 1057 0.15847504130546253 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1009 0.1512784452953753 No Hit CGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTG 984 0.1475302182067882 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT 959 0.14378199111820109 No Hit CCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 952 0.1427324875333967 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 923 0.13838454411063567 No Hit CTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGCT 787 0.11799418874872186 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4992908354348393E-4 0.0 0.0 0.12354156483983077 0.0 2 1.4992908354348393E-4 0.0 0.0 0.532548104746455 0.0 3 1.4992908354348393E-4 0.0 0.0 0.9108191825266649 0.0 4 1.4992908354348393E-4 0.0 0.0 1.3382669997091377 0.0 5 1.4992908354348393E-4 0.0 0.0 2.5591395270037274 0.0 6 1.4992908354348393E-4 0.0 0.0 3.8273896446980578 0.0 7 1.4992908354348393E-4 0.0 0.0 4.8166217379179646 0.0 8 1.4992908354348393E-4 0.0 0.0 6.096866182295774 0.0 9 1.4992908354348393E-4 0.0 0.0 6.886542665319304 0.0 10 1.4992908354348393E-4 0.0 0.0 8.094521291429155 0.0 11 1.4992908354348393E-4 0.0 0.0 9.193201615635804 0.0 12 1.4992908354348393E-4 0.0 0.0 10.164442218830493 0.0 13 1.4992908354348393E-4 0.0 0.0 10.585143227253509 0.0 14 1.4992908354348393E-4 0.0 0.0 10.797892596801713 0.0 15 1.4992908354348393E-4 0.0 0.0 11.067315159929354 0.0 16 1.4992908354348393E-4 0.0 0.0 11.46567673490439 0.0 17 1.4992908354348393E-4 0.0 0.0 11.892674764836233 0.0 18 1.4992908354348393E-4 0.0 0.0 12.405282301471404 0.0 19 0.0016492199189783233 0.0 0.0 12.749369548203699 0.0 20 0.0016492199189783233 0.0 0.0 13.06482033997919 0.0 21 0.0016492199189783233 0.0 0.0 13.396013685526746 0.0 22 0.0016492199189783233 0.0 0.0 13.77488447964113 0.0 23 0.0016492199189783233 0.0 0.0 14.14326023790747 0.0 24 0.0016492199189783233 0.0 0.0 14.448965639252634 0.0 25 0.0016492199189783233 0.0 0.0 14.74012791949408 0.0 26 0.0016492199189783233 0.0 0.0 15.019295873052046 0.0 27 0.0016492199189783233 0.0 0.0 15.311057869627666 0.0 28 0.0016492199189783233 0.0 0.0 15.60296979528683 0.0 29 0.0016492199189783233 0.0 0.0 15.908375338464905 0.0 30 0.001799149002521807 0.0 0.0 16.26235790471107 0.0 31 0.001799149002521807 0.0 0.0 16.55052160328165 0.0 32 0.001799149002521807 0.0 0.0 16.872119487482422 0.0 33 0.001799149002521807 0.0 0.0 17.195066733435084 0.0 34 0.001799149002521807 0.0 0.0 17.481581212086684 0.0 35 0.001799149002521807 0.0 0.0 17.796132429360913 0.0 36 0.001799149002521807 0.0 0.0 18.10033853987064 0.0 37 0.001799149002521807 0.0 0.0 18.401695997793045 0.0 38 0.001799149002521807 0.0 0.0 18.737387215846905 0.0 39 0.001799149002521807 0.0 0.0 19.04923970961735 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTACG 25 3.8890375E-5 45.000004 1 TCGTACG 25 3.8890375E-5 45.000004 30 GGTTACG 25 3.8890375E-5 45.000004 1 ACGGGTA 20 7.031154E-4 45.0 5 CGGTAAT 20 7.031154E-4 45.0 6 CGTTTTT 7615 0.0 43.493107 1 CGTTAGG 40 3.455316E-7 39.375 2 ACAACGA 75 0.0 39.0 13 GGCCGAT 140 0.0 38.57143 8 TCTCGTA 35 6.244345E-6 38.57143 28 TATACGG 35 6.244345E-6 38.57143 2 ACGGGAC 220 0.0 37.840908 5 GTTTTTT 8995 0.0 37.6209 2 GCCGATC 30 1.139408E-4 37.500004 9 CGATACG 30 1.139408E-4 37.500004 10 ACGGTTA 30 1.139408E-4 37.500004 34 ATTAGTC 110 0.0 36.81818 31 CAGGTCG 25 0.0021064754 36.000004 1 TAACATA 25 0.0021064754 36.000004 23 CTACGAC 25 0.0021064754 36.000004 28 >>END_MODULE