##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551561_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 302958 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29445005578331 33.0 31.0 34.0 30.0 34.0 2 32.410185570277065 34.0 31.0 34.0 30.0 34.0 3 32.41983377233808 34.0 31.0 34.0 30.0 34.0 4 35.89491282620033 37.0 35.0 37.0 35.0 37.0 5 36.00479934512374 37.0 35.0 37.0 35.0 37.0 6 36.03983060358201 37.0 35.0 37.0 35.0 37.0 7 36.17680338528773 37.0 36.0 37.0 35.0 37.0 8 36.09893120498551 37.0 37.0 37.0 35.0 37.0 9 37.94569874372025 39.0 38.0 39.0 35.0 39.0 10 37.69064358755999 39.0 37.0 39.0 35.0 39.0 11 37.62856567577024 39.0 37.0 39.0 35.0 39.0 12 37.58502828774946 39.0 37.0 39.0 35.0 39.0 13 37.543316235253734 39.0 37.0 39.0 35.0 39.0 14 38.84387604882525 40.0 38.0 41.0 35.0 41.0 15 38.911872272724274 40.0 38.0 41.0 35.0 41.0 16 38.92457700407317 40.0 38.0 41.0 35.0 41.0 17 38.85606585731355 40.0 38.0 41.0 35.0 41.0 18 38.7986585599324 40.0 38.0 41.0 35.0 41.0 19 38.74654242502261 40.0 38.0 41.0 35.0 41.0 20 38.65863254972636 40.0 38.0 41.0 35.0 41.0 21 38.554730358663576 40.0 38.0 41.0 35.0 41.0 22 38.54925765287597 40.0 38.0 41.0 35.0 41.0 23 38.520511093947015 40.0 38.0 41.0 35.0 41.0 24 38.45444583077522 40.0 37.0 41.0 35.0 41.0 25 38.34651337809201 40.0 37.0 41.0 34.0 41.0 26 38.35123020352656 40.0 37.0 41.0 34.0 41.0 27 38.317146271100285 40.0 37.0 41.0 34.0 41.0 28 38.26920233167634 40.0 37.0 41.0 34.0 41.0 29 38.221050442635615 40.0 37.0 41.0 34.0 41.0 30 38.01547739290595 40.0 37.0 41.0 34.0 41.0 31 37.99068517748335 40.0 37.0 41.0 34.0 41.0 32 37.85613187306491 40.0 37.0 41.0 34.0 41.0 33 37.723486423860734 40.0 36.0 41.0 33.0 41.0 34 37.63320328230316 40.0 36.0 41.0 33.0 41.0 35 37.53227510083906 40.0 36.0 41.0 33.0 41.0 36 37.40924814660778 40.0 36.0 41.0 33.0 41.0 37 37.35549812185187 40.0 36.0 41.0 33.0 41.0 38 37.21476244231874 40.0 35.0 41.0 33.0 41.0 39 37.231431419536705 40.0 35.0 41.0 33.0 41.0 40 37.136055162761835 40.0 35.0 41.0 32.0 41.0 41 37.07138943351884 40.0 35.0 41.0 32.0 41.0 42 36.9418467246285 39.0 35.0 41.0 32.0 41.0 43 36.92733976326752 39.0 35.0 41.0 32.0 41.0 44 36.898609708276396 39.0 35.0 41.0 32.0 41.0 45 36.80253038374956 39.0 35.0 41.0 32.0 41.0 46 36.731048528178825 39.0 35.0 41.0 31.0 41.0 47 36.68284712732458 39.0 35.0 41.0 31.0 41.0 48 36.64510592227305 39.0 35.0 41.0 31.0 41.0 49 36.62365080308162 39.0 35.0 41.0 31.0 41.0 50 36.55626522488266 39.0 35.0 41.0 31.0 41.0 51 35.63971243538708 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 6.0 11 6.0 12 7.0 13 4.0 14 12.0 15 8.0 16 21.0 17 45.0 18 66.0 19 114.0 20 181.0 21 251.0 22 423.0 23 600.0 24 956.0 25 1564.0 26 2275.0 27 2865.0 28 2871.0 29 3075.0 30 3582.0 31 4263.0 32 5508.0 33 7628.0 34 14456.0 35 21677.0 36 20365.0 37 30310.0 38 59396.0 39 120236.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41201090580213 21.379861234890647 23.44120307105275 13.766924788254478 2 33.01084638794816 24.14823176809987 24.85361007136303 17.98731177258894 3 31.824873414796773 23.62373662355838 27.417661854118393 17.133728107526455 4 29.121528396675444 24.90015117607061 27.494900283207574 18.48342014404637 5 25.21339591626562 28.11577842473214 26.200001320315025 20.47082433868721 6 25.625664283498047 33.5564665729243 25.02756157619208 15.790307567385579 7 75.9290066609893 6.709840968054978 11.840915242376832 5.520237128578879 8 75.61345136949676 6.406828669320499 11.36362136005651 6.616098601126229 9 68.30847840294695 9.025673525703233 14.47065269773368 8.195195373616144 10 36.64105255513966 27.152938691171713 20.742479155526507 15.46352959816212 11 28.28411859069574 23.441533149809544 27.489949101855704 20.784399157639015 12 25.089616382468854 21.790149129582318 32.76988889549046 20.35034559245836 13 23.390370942506884 24.113243419879986 33.87235194317364 18.624033694439493 14 20.05129423880538 27.25031192442517 31.07064345552849 21.627750381240965 15 18.97754804296305 24.88793826206933 35.67755266406565 20.456961030901972 16 21.28941965552981 24.475339816080115 32.180698314617864 22.054542213772205 17 20.707820886063416 24.38225760666495 29.523234243690545 25.38668726358109 18 21.11546815070076 24.53640438608652 32.062530119686556 22.285597343526163 19 22.61897688788545 24.753596208055242 30.007129701146695 22.620297202912614 20 22.96258887370527 25.018319371001922 30.241485618468566 21.777606136824247 21 22.74473689422296 26.084473755438047 30.24478640603648 20.92600294430251 22 21.319786901154618 24.734451640161343 27.916080776873365 26.029680681810678 23 20.20610117574053 25.999973593699455 29.392523056001163 24.40140217455885 24 21.37854091986348 24.95296377715723 30.49003492233247 23.178460380646822 25 20.66590088395091 26.425115032446744 28.957479254550133 23.95150482905221 26 20.547402610262807 26.389136447956485 29.50045880947194 23.563002132308768 27 23.439552677268797 24.560830214089084 29.79422890301626 22.205388205625862 28 21.34487288667076 24.598129113606507 30.489704843575677 23.567293156147056 29 23.10881376296384 24.07396404782181 28.740617511338208 24.07660467787614 30 23.153374395130676 25.246733870701547 29.81997504604599 21.779916688121787 31 25.052977640465013 25.307798440707952 26.140917222849367 23.49830669597766 32 24.46147650829488 27.08626278229986 26.010536113916782 22.441724595488484 33 22.84310036374679 27.916740934386947 26.625472837819103 22.614685864047164 34 22.935522415648375 25.279411667623897 26.958192224664806 24.826873692062925 35 23.638590167613994 25.098198430145434 27.381683269628134 23.88152813261244 36 23.684801193564784 28.365317964866417 26.81988922556922 21.12999161599958 37 23.568943549931014 26.91891285260663 28.33396048297124 21.178183114491116 38 22.170069778649186 29.795549218043426 25.76429736135042 22.27008364195697 39 23.310821962120162 26.72053551977502 26.59807630100542 23.3705662170994 40 22.22915387611484 25.789713425623358 28.825117673076793 23.15601502518501 41 20.26650558823335 26.97271568996363 27.37805240330343 25.382726318499593 42 21.649865657945984 27.084942467272693 28.071217792565307 23.193974082216016 43 23.579836148905127 24.465437453376378 29.26445249836611 22.690273899352388 44 23.306200859525084 24.538384858627268 27.784049274156814 24.371365007690834 45 23.73926418843536 23.64354134896586 27.44637870595924 25.170815756639538 46 23.533625122954337 25.172796229180282 28.344853081945352 22.94872556592003 47 21.498359508578744 25.185669300695146 30.451415707787877 22.86455548293823 48 20.805854276830452 25.279411667623897 29.343341321239247 24.571392734306404 49 22.34468144099182 24.260458545408934 30.682470837541835 22.712389176057407 50 21.64821526416203 23.196614712270346 30.703595877976486 24.451574145591138 51 21.370619029700485 23.398622911426667 27.58501178381162 27.645746275061228 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 222.0 1 471.5 2 721.0 3 1954.0 4 3187.0 5 2126.5 6 1066.0 7 1002.0 8 938.0 9 962.0 10 986.0 11 977.0 12 968.0 13 951.0 14 934.0 15 875.0 16 816.0 17 844.5 18 873.0 19 860.5 20 848.0 21 879.0 22 910.0 23 1071.0 24 1232.0 25 1565.0 26 2354.0 27 2810.0 28 3138.0 29 3466.0 30 4168.0 31 4870.0 32 5317.0 33 5764.0 34 6408.5 35 7053.0 36 7749.0 37 8445.0 38 8876.5 39 9308.0 40 10762.0 41 12216.0 42 14038.5 43 15861.0 44 17450.5 45 19040.0 46 22599.0 47 26158.0 48 29938.5 49 33719.0 50 32843.5 51 31968.0 52 27185.0 53 22402.0 54 19572.5 55 16743.0 56 15130.5 57 13518.0 58 12923.5 59 12329.0 60 11418.0 61 10507.0 62 9726.5 63 8946.0 64 8071.0 65 7196.0 66 6214.0 67 5232.0 68 4330.5 69 3429.0 70 2993.0 71 2557.0 72 2078.0 73 1599.0 74 1278.0 75 761.5 76 566.0 77 464.5 78 363.0 79 272.0 80 181.0 81 146.5 82 112.0 83 75.0 84 38.0 85 21.5 86 5.0 87 3.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 302958.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.72666529990265 #Duplication Level Percentage of deduplicated Percentage of total 1 71.4666401855624 24.103314536470357 2 9.875913704993337 6.661632721180635 3 3.6714631083799083 3.714786222518081 4 1.9968594634556212 2.693896430996437 5 1.4451271868294042 2.4369660472992596 6 1.125317492456252 2.277192385451864 7 0.9704112537298047 2.291011489046282 8 0.933433673856988 2.51852840782665 9 0.7925191675663359 2.405612583744054 >10 7.577402683364237 43.25248955321568 >50 0.08494846057576289 1.964061163529755 >100 0.053967257306955244 3.37601452100807 >500 0.002998180961497514 0.7465926681342727 >1k 0.002998180961497514 1.5579012695786043 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1974 0.6515754659061652 No Hit GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1374 0.4535282118313429 No Hit CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1274 0.4205203361522059 No Hit CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 956 0.3155552914925501 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCC 732 0.24161764997128313 No Hit TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 527 0.1739515048290522 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 426 0.14061355039312382 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 381 0.12576000633751214 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 373 0.12311937628318116 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC 362 0.1194885099584761 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC 355 0.1171779586609365 No Hit ACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 352 0.11618772239056238 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 312 0.10298457211890756 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32545765419629125 0.0 2 0.0 0.0 0.0 1.5302451164847932 0.0 3 0.0 0.0 0.0 2.087748136705418 0.0 4 0.0 0.0 0.0 2.725790373583137 0.0 5 0.0 0.0 0.0 4.591395506967962 0.0 6 0.0 0.0 0.0 5.594174770100146 0.0 7 0.0 0.0 0.0 6.626331042586761 0.0 8 0.0 0.0 0.0 8.232164194376779 0.0 9 0.0 0.0 0.0 8.883409581526152 0.0 10 0.0 0.0 0.0 10.249275477128842 0.0 11 0.0 0.0 0.0 12.01618706223305 0.0 12 0.0 0.0 0.0 13.431894850111236 0.0 13 0.0 0.0 0.0 13.9649720423293 0.0 14 0.0 0.0 0.0 14.173581816621446 0.0 15 0.0 0.0 0.0 14.605984988018141 0.0 16 0.0 0.0 0.0 15.434482667564481 0.0 17 0.0 0.0 0.0 16.440562718264577 0.0 18 0.0 0.0 0.0 17.52289096178348 0.0 19 0.0 0.0 0.0 18.135517134388266 0.0 20 0.0 0.0 0.0 18.722397163963322 0.0 21 0.0 0.0 0.0 19.354167904462006 0.0 22 0.0 0.0 0.0 20.02224730820774 0.0 23 0.0 0.0 0.0 20.715742776226406 0.0 24 0.0 0.0 0.0 21.281827844123608 0.0 25 0.0 0.0 0.0 21.799061256015687 0.0 26 0.0 0.0 0.0 22.257540649198898 0.0 27 3.3007875679137044E-4 0.0 0.0 22.72064114497719 0.0 28 3.3007875679137044E-4 0.0 0.0 23.200575657351845 0.0 29 3.3007875679137044E-4 0.0 0.0 23.694043398754943 0.0 30 3.3007875679137044E-4 0.0 0.0 24.246925316380487 0.0 31 3.3007875679137044E-4 0.0 0.0 24.739732900270006 0.0 32 3.3007875679137044E-4 0.0 0.0 25.200522844750758 0.0 33 6.601575135827409E-4 0.0 0.0 25.65834208042039 0.0 34 6.601575135827409E-4 0.0 0.0 26.093715960628206 0.0 35 6.601575135827409E-4 0.0 0.0 26.586853623274514 0.0 36 6.601575135827409E-4 0.0 0.0 27.044672858944143 0.0 37 6.601575135827409E-4 0.0 0.0 27.478066266611215 0.0 38 6.601575135827409E-4 0.0 0.0 27.897926445249837 0.0 39 6.601575135827409E-4 0.0 0.0 28.31547607259092 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.0250535E-4 45.0 25 TTTAGCG 20 7.0250535E-4 45.0 1 TTAGGCG 20 7.0250535E-4 45.0 1 TTTACGG 25 3.8839826E-5 45.0 2 TTAGCTA 20 7.0250535E-4 45.0 1 TCGATTG 20 7.0250535E-4 45.0 1 TCGTCGG 20 7.0250535E-4 45.0 2 AATTCGT 20 7.0250535E-4 45.0 31 ACCGTCG 20 7.0250535E-4 45.0 15 CAATCTA 20 7.0250535E-4 45.0 44 AATACGG 20 7.0250535E-4 45.0 2 ACGGTCT 20 7.0250535E-4 45.0 30 CCCTCGT 30 2.1601918E-6 44.999996 14 AGTACGG 30 2.1601918E-6 44.999996 2 TACGGGA 90 0.0 42.500004 4 AACGGGA 70 0.0 41.785717 4 TACGAAT 70 0.0 41.785717 12 CGAATAT 65 0.0 41.53846 14 CGGGATA 60 3.6379788E-12 41.249996 6 CGTTTTT 845 0.0 40.739647 1 >>END_MODULE