##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551545_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 526741 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.210374738248966 33.0 31.0 34.0 30.0 34.0 2 32.32220389147608 34.0 31.0 34.0 30.0 34.0 3 32.34850144568203 34.0 31.0 34.0 30.0 34.0 4 35.89522175034789 37.0 35.0 37.0 35.0 37.0 5 35.95977150060466 37.0 35.0 37.0 35.0 37.0 6 35.96363487938095 37.0 35.0 37.0 35.0 37.0 7 36.070537512743456 37.0 35.0 37.0 35.0 37.0 8 35.86812304339324 37.0 35.0 37.0 35.0 37.0 9 37.71355561841588 39.0 38.0 39.0 35.0 39.0 10 37.485802320305424 39.0 37.0 39.0 35.0 39.0 11 37.48076189246708 39.0 37.0 39.0 35.0 39.0 12 37.44908598343398 39.0 37.0 39.0 35.0 39.0 13 37.376452563973565 39.0 37.0 39.0 34.0 39.0 14 38.7063300559478 40.0 38.0 41.0 35.0 41.0 15 38.691757429172974 40.0 38.0 41.0 35.0 41.0 16 38.789528439973346 40.0 38.0 41.0 35.0 41.0 17 38.66616040900556 40.0 38.0 41.0 35.0 41.0 18 38.606542874012085 40.0 38.0 41.0 35.0 41.0 19 38.53089658864603 40.0 38.0 41.0 34.0 41.0 20 38.30234783318557 40.0 37.0 41.0 34.0 41.0 21 38.31423413024618 40.0 37.0 41.0 34.0 41.0 22 38.26347863561029 40.0 37.0 41.0 34.0 41.0 23 38.15213169280538 40.0 37.0 41.0 34.0 41.0 24 38.109146620445344 40.0 37.0 41.0 34.0 41.0 25 38.09461765839379 40.0 37.0 41.0 34.0 41.0 26 38.044205786145376 40.0 37.0 41.0 34.0 41.0 27 37.97327149396003 40.0 37.0 41.0 34.0 41.0 28 37.89555018500553 40.0 36.0 41.0 33.0 41.0 29 37.810007195187005 40.0 36.0 41.0 33.0 41.0 30 37.69398433005974 40.0 36.0 41.0 33.0 41.0 31 37.68954571601603 40.0 36.0 41.0 33.0 41.0 32 37.3533994885532 40.0 36.0 41.0 32.0 41.0 33 37.24229744789185 40.0 36.0 41.0 32.0 41.0 34 37.1137769795782 40.0 36.0 41.0 31.0 41.0 35 37.0129874074735 40.0 35.0 41.0 31.0 41.0 36 36.881038309150036 40.0 35.0 41.0 31.0 41.0 37 36.69338061779888 40.0 35.0 41.0 31.0 41.0 38 36.59230247882736 39.0 35.0 41.0 30.0 41.0 39 36.49340947448556 39.0 35.0 41.0 30.0 41.0 40 36.508151064754784 39.0 35.0 41.0 30.0 41.0 41 36.46950588619455 39.0 35.0 41.0 30.0 41.0 42 36.359425220364464 39.0 35.0 41.0 30.0 41.0 43 36.26180988379488 39.0 35.0 41.0 30.0 41.0 44 36.328937751190814 39.0 35.0 41.0 30.0 41.0 45 36.22128142673534 39.0 35.0 41.0 30.0 41.0 46 36.126211933379025 39.0 35.0 41.0 29.0 41.0 47 35.99987849816134 39.0 35.0 41.0 29.0 41.0 48 36.00928539832669 39.0 35.0 41.0 29.0 41.0 49 35.93927376072871 39.0 35.0 41.0 29.0 41.0 50 35.80472376367133 39.0 35.0 41.0 29.0 41.0 51 35.09914170341781 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 16.0 10 11.0 11 13.0 12 17.0 13 16.0 14 19.0 15 38.0 16 37.0 17 87.0 18 142.0 19 308.0 20 814.0 21 1472.0 22 2225.0 23 2901.0 24 3452.0 25 4229.0 26 5122.0 27 5593.0 28 5665.0 29 5907.0 30 6943.0 31 8451.0 32 10516.0 33 14097.0 34 25386.0 35 36383.0 36 35614.0 37 53871.0 38 99879.0 39 197240.0 40 272.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.087200350836554 17.686301237230442 20.894329471220203 13.3321689407128 2 32.40947638402935 29.24302456045761 21.66928338595249 16.67821566956056 3 30.573469693834348 28.682217636371576 24.99065005382152 15.753662615972555 4 26.83178260283517 22.608074936258994 32.02864405846517 18.53149840244067 5 28.7139220223981 26.019808596634782 24.02072365735722 21.245545723609897 6 24.476735245595084 37.204622385574694 24.533119692600348 13.785522676229874 7 71.74246925908558 6.2263996916890845 16.902994071089967 5.128136978135364 8 69.94841867255445 11.643103536652738 12.0848766281721 6.32360116262072 9 64.12069688898339 7.832122428290185 13.761602001742792 14.285578680983631 10 37.123937570836524 23.366322348174908 21.969051203532665 17.540688877455903 11 29.671318541750118 22.870063275879417 26.536191410959088 20.922426771411377 12 24.931038214226724 20.29365475632237 31.023406190138985 23.751900839311922 13 25.04475634135182 21.766674703507036 33.805228755688276 19.38334019945286 14 20.002809730019116 29.01482891971576 28.477183283625155 22.50517806663996 15 18.18863540145916 23.557497897448652 35.60231688818604 22.65154981290615 16 20.155826108087275 23.088766585475597 30.290028685824723 26.465378620612405 17 20.785927049536678 24.47028046041603 30.474749449919408 24.26904304012788 18 21.11303278081638 23.275955355668156 30.583911258094588 25.027100605420884 19 21.844701665524425 24.900852601183505 28.178744392405374 25.075701340886695 20 25.271433209110363 23.457448727173315 30.66288745322654 20.608230610489787 21 23.180082811096913 27.997820560768954 28.228674054231583 20.593422573902544 22 20.675246468378198 22.921321864066023 29.976591911394785 26.426839756160998 23 22.61908604038797 26.30571761074228 28.854978063222724 22.220218285647025 24 22.19212098545585 25.238020203477614 28.188236723551043 24.381622087515495 25 20.895468550957684 29.579622622882972 26.81431671352714 22.710592112632206 26 19.9897103130381 24.756948861015186 30.01873786168155 25.234602964265168 27 25.426537900030567 24.651963678544103 26.77976462815691 23.14173379326842 28 20.645060855334975 26.069548411838078 29.662205903850282 23.62318482897667 29 22.823550853265647 22.74495435137952 28.768977543042972 25.662517252311858 30 23.3718279002394 26.454367516483433 28.422507456226114 21.751297127051057 31 25.0174184276523 23.839040439229148 25.257384559014774 25.88615657410378 32 26.216489697973007 25.297821889695314 27.048967139448038 21.436721272883638 33 24.409909234329586 23.03693845742025 27.87840703495646 24.674745273293706 34 22.758243614983456 22.23806386820088 29.147152015886363 25.8565405009293 35 26.501449478965945 21.80198617536892 27.508016273652515 24.188548072012622 36 24.80479020998935 25.08101704632827 28.101476816879646 22.012715926802738 37 23.848912463620643 23.870365132009848 31.321275541490028 20.95944686287948 38 23.091614284819293 23.85916418125796 29.219103885970526 23.83011764795222 39 22.517707943752242 23.551992345384164 32.08256049937256 21.847739211491035 40 23.351894004833497 21.71750442817248 32.57483279258687 22.355768774407156 41 20.92261661803429 23.79214832336955 30.80698104001777 24.47825401857839 42 23.965288443466523 23.2907633922554 30.096195283830195 22.647752880447886 43 23.54781571968007 23.105852781537795 29.716312191380585 23.63001930740155 44 23.51895903299724 22.426391718130922 29.863253477515517 24.191395771356323 45 22.28609506379796 21.760979304819635 29.241885480720125 26.711040150662278 46 25.26972458950414 24.29505202746701 28.254872888193628 22.18035049483522 47 20.909896894299095 23.929597278358813 33.803520136082064 21.35698569126003 48 22.999538672706322 23.210837964008878 28.990148858737026 24.799474504547774 49 22.312483744382913 21.897289180071418 32.691968158924404 23.098258916621262 50 22.32349484851189 21.420584309936004 31.32336385434208 24.932556987210035 51 21.69889945912697 21.62561866268242 28.98616207965585 27.68931979853476 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 195.0 1 647.5 2 1100.0 3 3558.0 4 6016.0 5 3955.0 6 1894.0 7 1780.5 8 1667.0 9 1670.5 10 1674.0 11 1672.0 12 1670.0 13 1730.0 14 1790.0 15 1714.0 16 1638.0 17 1604.0 18 1570.0 19 1533.0 20 1496.0 21 1570.5 22 1645.0 23 2000.5 24 2356.0 25 2559.0 26 3706.0 27 4650.0 28 4925.5 29 5201.0 30 6064.5 31 6928.0 32 7887.0 33 8846.0 34 9823.0 35 10800.0 36 11611.5 37 12423.0 38 14091.0 39 15759.0 40 17065.5 41 18372.0 42 20635.0 43 22898.0 44 26361.0 45 29824.0 46 46772.5 47 63721.0 48 56880.0 49 50039.0 50 49361.5 51 48684.0 52 42794.0 53 36904.0 54 33836.5 55 30769.0 56 28038.5 57 25308.0 58 24375.5 59 23443.0 60 22336.5 61 21230.0 62 19154.5 63 17079.0 64 15328.5 65 13578.0 66 11633.5 67 9689.0 68 8517.5 69 7346.0 70 6449.0 71 5552.0 72 4835.0 73 4118.0 74 3403.0 75 2034.5 76 1381.0 77 1216.5 78 1052.0 79 760.0 80 468.0 81 367.5 82 267.0 83 225.5 84 184.0 85 112.5 86 41.0 87 26.5 88 12.0 89 11.5 90 11.0 91 6.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 526741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.35169523866221 #Duplication Level Percentage of deduplicated Percentage of total 1 73.40526288906588 23.013794310118744 2 8.408305163774983 5.27229241936686 3 3.057282133661006 2.8755293313944037 4 1.8369331296549787 2.3036387061897945 5 1.304742593480795 2.0452946077855807 6 1.0725080852772755 2.017496797836857 7 0.9465361880804493 2.077285987074431 8 0.8396776228108347 2.106025354327172 9 0.8021140647395779 2.263287213392383 >10 8.19330125394145 44.36736864517801 >50 0.07367014583128305 1.5837560180601389 >100 0.05053406697517762 3.0260677539239946 >500 0.0036530650825429612 0.9431527642804804 >1k 0.0036530650825429612 2.2295131120817673 >5k 0.0018265325412714806 3.875496978989394 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG 7246 1.3756286296301217 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 6685 1.2691246741757334 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC 6372 1.2097026812038554 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3800 0.7214171670707236 No Hit GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2740 0.5201797467825744 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCT 1547 0.2936927256469498 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGGTTTGTT 1327 0.2519264686060132 No Hit GAACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCT 1247 0.23673873877294535 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTA 1019 0.1934537087487019 No Hit CTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCT 987 0.1873786168154748 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 981 0.18623953707799468 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTC 976 0.18529030396342794 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 768 0.1458022063974515 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCC 626 0.11884398594375603 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 603 0.11447751361674903 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19250447563413517 0.0 2 0.0 0.0 0.0 1.078138971524905 0.0 3 0.0 0.0 0.0 1.400308690608857 0.0 4 0.0 0.0 0.0 2.013892975864799 0.0 5 0.0 0.0 0.0 4.3548916830092965 0.0 6 0.0 0.0 0.0 5.186799584615589 0.0 7 0.0 0.0 0.0 6.166598005471379 0.0 8 0.0 0.0 0.0 7.397373661818617 0.0 9 0.0 0.0 0.0 7.90673215109513 0.0 10 0.0 0.0 0.0 10.247161318370889 0.0 11 0.0 0.0 0.0 11.41414850941924 0.0 12 0.0 0.0 0.0 13.587322801908337 0.0 13 0.0 0.0 0.0 14.066115984895802 0.0 14 0.0 0.0 0.0 14.273238650494266 0.0 15 0.0 0.0 0.0 14.782217446524953 0.0 16 0.0 0.0 0.0 15.458830810588125 0.0 17 0.0 0.0 0.0 16.18423475674003 0.0 18 0.0 0.0 0.0 16.964124683668064 0.0 19 0.0 0.0 0.0 17.658773476908006 0.0 20 0.0 0.0 0.0 18.122568776685316 0.0 21 0.0 0.0 0.0 18.600222879935302 0.0 22 0.0 0.0 0.0 19.13881774914047 0.0 23 0.0 0.0 0.0 19.64760669854824 0.0 24 0.0 0.0 0.0 20.06204187636808 0.0 25 0.0 0.0 0.0 20.430154478197064 0.0 26 0.0 0.0 0.0 20.776434718391013 0.0 27 0.0 0.0 0.0 21.156317810840623 0.0 28 0.0 0.0 0.0 21.511520842311498 0.0 29 0.0 0.0 0.0 21.86672387378237 0.0 30 0.0 0.0 0.0 22.276223039406464 0.0 31 0.0 0.0 0.0 22.66104214405182 0.0 32 0.0 0.0 0.0 23.022889807324663 0.0 33 0.0 0.0 0.0 23.385876550334984 0.0 34 0.0 0.0 0.0 23.723803539120745 0.0 35 0.0 0.0 0.0 24.122481447238776 0.0 36 0.0 0.0 0.0 24.49515036801768 0.0 37 0.0 0.0 0.0 24.83763367575336 0.0 38 0.0 0.0 0.0 25.15790492860818 0.0 39 0.0 0.0 0.0 25.479694954446302 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 25 3.887918E-5 45.0 1 ACCGGTT 25 3.887918E-5 45.0 39 TAACGCG 20 7.0298027E-4 45.0 1 GTGTCGA 20 7.0298027E-4 45.0 16 ATGCGCT 20 7.0298027E-4 45.0 18 CGATCGA 90 0.0 45.0 41 TATCGTG 20 7.0298027E-4 45.0 1 CGATCAC 30 2.1632532E-6 44.999996 34 ATAGGGT 105 0.0 42.857147 4 CCGATCG 95 0.0 42.63158 40 TATTAGT 70 0.0 41.785713 30 CGATGAA 945 0.0 41.666668 19 TCGAATG 130 0.0 41.53846 44 ATTGCGG 60 3.6379788E-12 41.249996 2 ATGAATG 1010 0.0 41.21287 21 GATGAAT 1010 0.0 41.21287 20 ACGTAGG 50 1.0786607E-9 40.5 2 CCGATGA 935 0.0 40.42781 18 GGTAATC 45 1.9248546E-8 40.0 8 TACGAGG 45 1.9248546E-8 40.0 2 >>END_MODULE