##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551525_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 223717 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40876196265818 33.0 31.0 34.0 31.0 34.0 2 32.53448329809536 34.0 31.0 34.0 31.0 34.0 3 32.54404001484018 34.0 31.0 34.0 31.0 34.0 4 35.9918826016798 37.0 35.0 37.0 35.0 37.0 5 36.11118064340216 37.0 35.0 37.0 35.0 37.0 6 36.14014580921432 37.0 36.0 37.0 35.0 37.0 7 36.271637828148954 37.0 37.0 37.0 35.0 37.0 8 36.21300124711131 37.0 37.0 37.0 35.0 37.0 9 38.09905371518481 39.0 39.0 39.0 37.0 39.0 10 37.73633206238239 39.0 37.0 39.0 35.0 39.0 11 37.68499488192672 39.0 37.0 39.0 35.0 39.0 12 37.60140266497405 39.0 37.0 39.0 35.0 39.0 13 37.53105932942065 39.0 37.0 39.0 35.0 39.0 14 38.834737637282814 40.0 38.0 41.0 35.0 41.0 15 38.91328776981633 40.0 38.0 41.0 35.0 41.0 16 38.97331450001565 40.0 38.0 41.0 35.0 41.0 17 38.92964772458061 40.0 38.0 41.0 35.0 41.0 18 38.85812432671634 40.0 38.0 41.0 35.0 41.0 19 38.78895211360782 40.0 38.0 41.0 35.0 41.0 20 38.70803738651958 40.0 38.0 41.0 35.0 41.0 21 38.62276447476052 40.0 38.0 41.0 35.0 41.0 22 38.60441986974615 40.0 38.0 41.0 35.0 41.0 23 38.569089519348104 40.0 38.0 41.0 35.0 41.0 24 38.50056097659096 40.0 37.0 41.0 35.0 41.0 25 38.405311174385496 40.0 37.0 41.0 35.0 41.0 26 38.41607030310615 40.0 37.0 41.0 35.0 41.0 27 38.41150203158455 40.0 37.0 41.0 35.0 41.0 28 38.34240133740395 40.0 37.0 41.0 35.0 41.0 29 38.32612631136659 40.0 37.0 41.0 35.0 41.0 30 38.21718063446229 40.0 37.0 41.0 34.0 41.0 31 38.16216916908416 40.0 37.0 41.0 34.0 41.0 32 38.049772703907166 40.0 37.0 41.0 34.0 41.0 33 37.9374656373901 40.0 37.0 41.0 34.0 41.0 34 37.806313333363136 40.0 36.0 41.0 34.0 41.0 35 37.732429810877136 40.0 36.0 41.0 34.0 41.0 36 37.633478904151225 40.0 36.0 41.0 33.0 41.0 37 37.59579736899744 40.0 36.0 41.0 33.0 41.0 38 37.48431724008457 40.0 36.0 41.0 33.0 41.0 39 37.4769016212447 40.0 36.0 41.0 33.0 41.0 40 37.43068251406911 40.0 35.0 41.0 33.0 41.0 41 37.337162575932986 40.0 35.0 41.0 33.0 41.0 42 37.18404949109813 40.0 35.0 41.0 33.0 41.0 43 37.1880322013973 40.0 35.0 41.0 33.0 41.0 44 37.161646186923655 40.0 35.0 41.0 33.0 41.0 45 37.085871882780474 40.0 35.0 41.0 33.0 41.0 46 37.04874461931816 39.0 35.0 41.0 33.0 41.0 47 36.99911048333386 39.0 35.0 41.0 33.0 41.0 48 36.94628034525763 39.0 35.0 41.0 33.0 41.0 49 36.9036461243446 39.0 35.0 41.0 33.0 41.0 50 36.814153595837595 39.0 35.0 41.0 32.0 41.0 51 35.95615442724514 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 5.0 11 3.0 12 4.0 13 4.0 14 7.0 15 8.0 16 8.0 17 16.0 18 51.0 19 65.0 20 108.0 21 199.0 22 303.0 23 430.0 24 672.0 25 1080.0 26 1477.0 27 1846.0 28 1901.0 29 2040.0 30 2305.0 31 2765.0 32 3597.0 33 5270.0 34 10679.0 35 16885.0 36 13996.0 37 20595.0 38 40469.0 39 96777.0 40 146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.61008327485171 20.33149023096144 24.526969340729583 12.531457153457271 2 32.92239749326157 24.315094516733193 25.06827822650938 17.694229763495844 3 32.60458525726699 23.494414818721868 27.10701466585016 16.79398525816098 4 27.928588350460625 25.51169557968326 27.794490360589496 18.765225709266616 5 25.025813863050196 29.8131121014496 25.832636768774837 19.32843726672537 6 24.63514171922563 35.138143279232246 25.319935454167542 14.906779547374585 7 78.33378777652123 6.223934703218799 10.637993536476888 4.804283983783083 8 79.31180911598135 5.995521127138304 9.162021661295297 5.530648095585048 9 73.09681427875397 8.02442371388853 11.919523326345338 6.959238681012171 10 38.937139332281404 26.365452781862803 20.07670405020629 14.620703835649504 11 30.452759513134897 23.971356669363526 25.373574650115994 20.202309167385582 12 27.07036121528538 21.352422927180324 30.85103054305216 20.726185314482134 13 24.859085362310417 24.70844862035518 30.878297134325955 19.554168883008444 14 21.82668281802456 26.959506876991913 29.55877291399402 21.65503739098951 15 20.48838487911066 25.61316305868575 33.62730592668416 20.271146135519427 16 22.687144919697655 23.505589651211128 31.536718264593215 22.270547164498 17 22.880246025112083 23.73310924069248 28.661210368456576 24.725434365738856 18 22.38676542238632 23.927551326005624 30.686537008810237 22.99914624279782 19 24.105007665935087 24.7307982853337 28.521748458990597 22.64244558974061 20 24.571221677387058 25.03207176924418 29.27403818216765 21.12266837120112 21 23.776914584050385 26.29572182712981 29.107756674727447 20.819606914092358 22 22.91734646897643 24.12825131751275 27.713137580067677 25.241264633443144 23 21.96837969398839 25.969863711742963 28.87844911204781 23.18330748222084 24 22.230764760836237 25.00435818467081 30.01694104605372 22.747936008439236 25 21.82847079122284 25.828166835779133 28.693393886025646 23.64996848697238 26 20.75211092585722 27.07706611477894 28.18739747091191 23.98342548845193 27 22.262948278405307 27.218762990742768 28.272773191129865 22.24551553972206 28 19.962720758815824 26.726623367915714 29.83412078652941 23.47653508673905 29 21.98223648627507 25.03251876254375 28.60980613900598 24.375438612175206 30 22.73318522955341 26.83658371961004 27.746215084235885 22.68401596660066 31 22.92941528806483 27.580827563394827 26.391825386537455 23.097931762002887 32 24.724093385840145 26.592972371344153 25.645346576254823 23.037587666560878 33 23.28611594112204 26.89379886195506 25.82369690278343 23.99638829413947 34 21.399357223635217 25.635512723664274 27.914731558173944 25.050398494526565 35 23.66159031276121 24.672689156389545 26.504020704729637 25.161699826119605 36 22.152987926710978 28.384968509322047 25.82637886258085 23.635664701386126 37 21.814167005636588 27.821756951863293 28.28037207722256 22.08370396527756 38 22.688485899596365 27.342580134723782 26.14285011867672 23.826083847003133 39 22.68312198000152 25.932763267878617 27.886123987001433 23.49799076511843 40 22.895890790597047 23.888215915643425 29.323207445120396 23.89268584863913 41 21.176307567149568 25.840235654867534 27.918307504570507 25.06514927341239 42 21.622406880120867 27.295645838268882 26.757912898885643 24.3240343827246 43 23.20118721420366 26.158047890862118 26.66091535287886 23.979849542055366 44 21.783324467966224 26.096362815521395 27.46505629880608 24.655256417706298 45 21.66800019667705 24.98066753979358 27.37074071259672 25.98059155093265 46 23.105083654796015 25.997130303016757 27.496345829776015 23.401440212411213 47 21.247379501781268 26.166987756853526 29.430038843717732 23.155593897647474 48 21.688114895157725 25.173768645208007 27.998766298493184 25.13935016114108 49 22.126168328736753 24.509536602046335 29.716561548742384 23.647733520474528 50 21.30057170443015 23.979402548755793 29.611518123343334 25.10850762347072 51 21.22905277649888 24.23955264910579 27.54238613963177 26.989008434763562 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 109.0 1 302.5 2 496.0 3 1279.5 4 2063.0 5 1361.0 6 659.0 7 629.5 8 600.0 9 634.0 10 668.0 11 666.5 12 665.0 13 644.0 14 623.0 15 600.0 16 577.0 17 571.0 18 565.0 19 593.5 20 622.0 21 627.5 22 633.0 23 766.5 24 900.0 25 1033.0 26 1661.5 27 2157.0 28 2035.5 29 1914.0 30 2553.0 31 3192.0 32 3686.0 33 4180.0 34 4339.0 35 4498.0 36 5274.5 37 6051.0 38 6525.0 39 6999.0 40 8341.5 41 9684.0 42 10922.0 43 12160.0 44 13352.5 45 14545.0 46 16677.5 47 18810.0 48 20460.0 49 22110.0 50 22042.5 51 21975.0 52 19620.0 53 17265.0 54 15421.0 55 13577.0 56 12855.0 57 12133.0 58 10861.5 59 9590.0 60 9025.5 61 8461.0 62 7572.5 63 6684.0 64 5996.0 65 5308.0 66 4558.0 67 3808.0 68 3257.0 69 2706.0 70 2390.0 71 2074.0 72 1787.0 73 1500.0 74 1224.5 75 761.5 76 574.0 77 402.5 78 231.0 79 203.5 80 176.0 81 108.0 82 40.0 83 23.0 84 6.0 85 4.5 86 3.0 87 2.0 88 1.0 89 5.5 90 10.0 91 5.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 223717.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.412521176307564 #Duplication Level Percentage of deduplicated Percentage of total 1 72.9441082235671 26.56078885377508 2 8.659358466014412 6.30618147033976 3 3.4421379555861087 3.7601076359865364 4 2.13967419992389 3.116437284605104 5 1.5774419660942045 2.8719319497400737 6 1.3159671499245038 2.8750609028370664 7 1.1072783295073716 2.8223156934877545 8 0.9427824357668088 2.74632683256078 9 0.8482586759308136 2.779851330028563 >10 6.935834325628215 41.772864824756276 >50 0.061379064828568274 1.538997930421023 >100 0.023324044634855944 1.8585981396138873 >500 0.0012275812965713653 0.4009529897146842 >1k 0.0012275812965713653 0.5895841621334096 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1319 0.5895841621334096 No Hit GCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 897 0.4009529897146842 No Hit CTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGCT 422 0.18863117241872543 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 366 0.16359954764278084 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCG 362 0.16181157444449906 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGC 343 0.1533187017526607 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTC 333 0.14884876875695632 No Hit TCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 325 0.14527282236039282 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCC 250 0.11174832489260986 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 241 0.1077253851964759 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.939865991408789E-4 0.0 0.0 0.20293495800497952 0.0 2 8.939865991408789E-4 0.0 0.0 1.036577461703849 0.0 3 8.939865991408789E-4 0.0 0.0 1.4044529472503207 0.0 4 8.939865991408789E-4 0.0 0.0 1.907320409267065 0.0 5 8.939865991408789E-4 0.0 0.0 3.2290795960968546 0.0 6 8.939865991408789E-4 0.0 0.0 3.9125323511400563 0.0 7 8.939865991408789E-4 0.0 0.0 4.6371084897437385 0.0 8 8.939865991408789E-4 0.0 0.0 5.782305323243205 0.0 9 8.939865991408789E-4 0.0 0.0 6.221699736720947 0.0 10 8.939865991408789E-4 0.0 0.0 7.269899024213627 0.0 11 8.939865991408789E-4 0.0 0.0 8.546064894487232 0.0 12 8.939865991408789E-4 0.0 0.0 9.663101150113759 0.0 13 8.939865991408789E-4 0.0 0.0 10.051091334140901 0.0 14 8.939865991408789E-4 0.0 0.0 10.187871283809455 0.0 15 8.939865991408789E-4 0.0 0.0 10.546359910064949 0.0 16 8.939865991408789E-4 0.0 0.0 11.196735160939937 0.0 17 8.939865991408789E-4 0.0 0.0 11.978526441888636 0.0 18 8.939865991408789E-4 0.0 0.0 12.81619188528364 0.0 19 8.939865991408789E-4 0.0 0.0 13.35571279786516 0.0 20 8.939865991408789E-4 0.0 0.0 13.82282079591627 0.0 21 0.0013409798987113182 0.0 0.0 14.4030180987587 0.0 22 0.0013409798987113182 0.0 0.0 15.011822972773638 0.0 23 0.0013409798987113182 0.0 0.0 15.591573282316498 0.0 24 0.0013409798987113182 0.0 0.0 16.09220577783539 0.0 25 0.0013409798987113182 0.0 0.0 16.495393734047926 0.0 26 0.0013409798987113182 0.0 0.0 16.88561888457292 0.0 27 0.0013409798987113182 0.0 0.0 17.290594813983738 0.0 28 0.0013409798987113182 0.0 0.0 17.71032152228038 0.0 29 0.0013409798987113182 0.0 0.0 18.143458029564137 0.0 30 0.0013409798987113182 0.0 0.0 18.62576379980064 0.0 31 0.0013409798987113182 0.0 0.0 19.069181152974515 0.0 32 0.0013409798987113182 0.0 0.0 19.492930800967294 0.0 33 0.0013409798987113182 0.0 0.0 19.91846842215835 0.0 34 0.0013409798987113182 0.0 0.0 20.33417219075886 0.0 35 0.0013409798987113182 0.0 0.0 20.82184188059021 0.0 36 0.0013409798987113182 0.0 0.0 21.195528279031098 0.0 37 0.0013409798987113182 0.0 0.0 21.60318616823934 0.0 38 0.0013409798987113182 0.0 0.0 22.046156528113645 0.0 39 0.0013409798987113182 0.0 0.0 22.487338914789667 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAGTAG 20 7.0210965E-4 45.0 1 GAGTATC 25 3.880704E-5 45.0 27 TATGCGG 20 7.0210965E-4 45.0 2 GCGTTGA 20 7.0210965E-4 45.0 17 GAAAGGT 20 7.0210965E-4 45.0 9 GTCCCGA 20 7.0210965E-4 45.0 20 GCGTGAC 20 7.0210965E-4 45.0 35 AGGGCGT 20 7.0210965E-4 45.0 6 TGCGTAG 25 3.880704E-5 45.0 1 ACGGGTA 30 2.1576416E-6 44.999996 5 TAGATGG 60 3.6379788E-12 41.249996 2 ACATACG 55 6.002665E-11 40.909092 17 CGTTTTT 645 0.0 40.813953 1 GCGGGAT 105 0.0 40.714287 5 ATAGCGG 50 1.0732037E-9 40.5 2 TACGAAA 50 1.0732037E-9 40.5 20 CATACGA 50 1.0732037E-9 40.5 18 ATACGAA 50 1.0732037E-9 40.5 19 TGACCCA 45 1.9163053E-8 40.0 11 ATTAGTC 40 3.4416007E-7 39.375 31 >>END_MODULE