SRR3551519_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551519_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	403794
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3151	0.7803483954689767	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	1260	0.31204029777559844	No Hit
CCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	1172	0.29024700713730267	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCC	879	0.217685255352977	No Hit
CTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGCT	803	0.19886377707444883	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	617	0.15280068549805098	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	568	0.14066578502899993	No Hit
TCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	479	0.11862484336072354	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTC	432	0.10698524495163377	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	405	0.10029866714215666	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	30	2.1619908E-6	45.000004	38
AGCGATG	30	2.1619908E-6	45.000004	1
TATCGCG	30	2.1619908E-6	45.000004	1
TACAAGG	35	1.2093187E-7	45.000004	2
CGACGGT	25	3.8862952E-5	45.0	28
ACGCATC	25	3.8862952E-5	45.0	24
TAGCGAA	20	7.027844E-4	45.0	38
CAACCGG	20	7.027844E-4	45.0	2
GCTTACG	25	3.8862952E-5	45.0	1
TTGCGAG	20	7.027844E-4	45.0	1
ATAAGCG	20	7.027844E-4	45.0	12
CGAATAT	40	6.7957444E-9	45.0	14
CCGAATA	20	7.027844E-4	45.0	21
CGTTTAC	20	7.027844E-4	45.0	33
TAGTACG	20	7.027844E-4	45.0	1
CGTTTTT	1440	0.0	42.03125	1
AAGGGCG	170	0.0	41.02941	5
CGTGTAC	50	1.0786607E-9	40.5	18
CGTAAGG	50	1.0786607E-9	40.5	2
CTAGAAT	45	1.9230356E-8	40.0	41