##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551519_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 403794 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.381957136559734 33.0 31.0 34.0 31.0 34.0 2 32.51238255149903 34.0 31.0 34.0 31.0 34.0 3 32.50570340322045 34.0 31.0 34.0 31.0 34.0 4 36.009279484093376 37.0 35.0 37.0 35.0 37.0 5 36.10809472156595 37.0 35.0 37.0 35.0 37.0 6 36.13006632094583 37.0 36.0 37.0 35.0 37.0 7 36.24792839913421 37.0 37.0 37.0 35.0 37.0 8 36.16473251212252 37.0 37.0 37.0 35.0 37.0 9 38.024876545961554 39.0 39.0 39.0 35.0 39.0 10 37.67198868730095 39.0 37.0 39.0 35.0 39.0 11 37.68097594317895 39.0 37.0 39.0 35.0 39.0 12 37.6227754746232 39.0 37.0 39.0 35.0 39.0 13 37.599471512702024 39.0 37.0 39.0 35.0 39.0 14 38.88449060659643 40.0 38.0 41.0 35.0 41.0 15 38.959063284744204 40.0 38.0 41.0 35.0 41.0 16 38.97871934699376 40.0 38.0 41.0 35.0 41.0 17 38.945472196218866 40.0 38.0 41.0 35.0 41.0 18 38.85013397920722 40.0 38.0 41.0 35.0 41.0 19 38.771304179854084 40.0 38.0 41.0 35.0 41.0 20 38.676211137362124 40.0 38.0 41.0 35.0 41.0 21 38.59833479447441 40.0 38.0 41.0 35.0 41.0 22 38.576306235357634 40.0 38.0 41.0 35.0 41.0 23 38.54815821929003 40.0 38.0 41.0 35.0 41.0 24 38.47221107792587 40.0 37.0 41.0 35.0 41.0 25 38.36499799402666 40.0 37.0 41.0 34.0 41.0 26 38.38539205634556 40.0 37.0 41.0 35.0 41.0 27 38.36911147763463 40.0 37.0 41.0 35.0 41.0 28 38.318585714497985 40.0 37.0 41.0 35.0 41.0 29 38.26814415271153 40.0 37.0 41.0 34.0 41.0 30 38.11170795009336 40.0 37.0 41.0 34.0 41.0 31 38.08498888046876 40.0 37.0 41.0 34.0 41.0 32 37.95559369381417 40.0 37.0 41.0 34.0 41.0 33 37.82839764830582 40.0 37.0 41.0 34.0 41.0 34 37.68217457416405 40.0 36.0 41.0 33.0 41.0 35 37.576068490368854 40.0 36.0 41.0 33.0 41.0 36 37.48649806584545 40.0 36.0 41.0 33.0 41.0 37 37.40337647414275 40.0 36.0 41.0 33.0 41.0 38 37.28503147644591 40.0 35.0 41.0 33.0 41.0 39 37.2839319058728 40.0 35.0 41.0 33.0 41.0 40 37.20784607993185 40.0 35.0 41.0 33.0 41.0 41 37.12112116574293 40.0 35.0 41.0 33.0 41.0 42 37.03703373502331 40.0 35.0 41.0 32.0 41.0 43 37.004284362818666 40.0 35.0 41.0 32.0 41.0 44 36.96129462052433 39.0 35.0 41.0 32.0 41.0 45 36.87274204173415 39.0 35.0 41.0 32.0 41.0 46 36.818714493033575 39.0 35.0 41.0 32.0 41.0 47 36.74443156659088 39.0 35.0 41.0 32.0 41.0 48 36.68528011808001 39.0 35.0 41.0 32.0 41.0 49 36.629845911529145 39.0 35.0 41.0 32.0 41.0 50 36.55745008593491 39.0 35.0 41.0 31.0 41.0 51 35.74053849239959 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 3.0 10 12.0 11 11.0 12 7.0 13 12.0 14 11.0 15 15.0 16 27.0 17 45.0 18 88.0 19 121.0 20 206.0 21 387.0 22 551.0 23 844.0 24 1323.0 25 2087.0 26 3050.0 27 3808.0 28 3890.0 29 3994.0 30 4423.0 31 5386.0 32 6713.0 33 9570.0 34 19124.0 35 28831.0 36 25839.0 37 39328.0 38 75492.0 39 168358.0 40 234.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.60832999004443 20.82175564768174 24.96396677513782 13.605947587136013 2 34.14860052402958 24.20268750897735 24.31685463379842 17.331857333194648 3 31.923456019653585 22.90004309127922 27.91571940147699 17.260781487590208 4 28.698544307245772 24.523643243832254 27.601202593401585 19.17660985552039 5 24.435479477159145 29.30652758584823 25.884980955635793 20.373011981356832 6 24.822558037018876 34.30437302188739 26.103161513048732 14.769907428044993 7 76.138080308276 6.7252113701540885 11.976651460893425 5.160056860676483 8 76.432289731893 6.524861686899756 11.360743349331589 5.682105231875659 9 69.70113473701937 8.254456480284501 14.125519448035384 7.918889334660744 10 37.359148476698515 22.140249731298635 23.524371337860394 16.976230454142456 11 29.320396043527147 23.777965992560564 25.868140685597112 21.03349727831518 12 25.388688291554608 21.28189126138576 32.02400233782573 21.305418109233916 13 24.35202108005567 22.141487986448535 33.444033343734674 20.062457589761117 14 21.15162681961594 25.602906432487853 31.8900231306062 21.355443617290003 15 20.332892514499967 24.37406202172395 34.029480378608895 21.263565085167187 16 21.847030911801564 23.521151874470647 32.297904376984306 22.33391283674349 17 22.141487986448535 23.866625061293632 30.102725647235967 23.889161305021865 18 22.209096717633248 24.332704299717182 31.20724924094959 22.250949741699976 19 23.615011614833307 24.869116430655236 29.809506827738897 21.70636512677256 20 22.951059203455227 25.648969524064253 30.029916244421663 21.37005502805886 21 23.566472012957103 25.21780908086797 30.220359886476768 20.995359019698164 22 21.38441878779774 24.600415063126245 29.386518868531976 24.62864728054404 23 21.744503385389578 24.552866065369965 30.054433696389744 23.64819685285071 24 22.26432289731893 25.062779536100088 29.684938359658634 22.987959206922344 25 21.936432933624573 26.25720045369669 27.96425900335319 23.842107609325545 26 21.586006726201976 26.09771319038916 28.946442988256386 23.36983709515248 27 23.3235263525461 24.4807996156456 30.188660554639245 22.007013477169053 28 20.197427401100562 25.115529205485963 30.74092235149606 23.94612104191741 29 23.67841027850835 23.908973387420318 29.256749728822122 23.155866605249212 30 22.977805514693138 24.543702977260683 29.810002129798857 22.668489378247326 31 23.111041768822716 25.172241291351533 28.889730902390827 22.826986037434928 32 24.5882801626572 25.501369510195794 27.93503618181548 21.97531414533153 33 23.78118545595031 24.223737846525704 28.14553955729902 23.849537140224967 34 22.485227616061657 24.08530092076653 29.880087371283377 23.549384091888438 35 23.703670683566372 24.133097569552792 28.43999663194599 23.723235114934845 36 23.955531781056678 25.712615838769278 28.83599062888503 21.495861751289024 37 22.95304041169507 25.76511785712517 30.801349202811334 20.480492528368423 38 22.848036374983284 26.59053874005062 27.504618691709137 23.056806193256957 39 24.317597586888365 23.813627740877774 28.26416440065974 23.60461027157412 40 22.851751140432995 23.977820373754934 30.58069213509859 22.589736350713483 41 21.596903371521122 25.462735949518816 28.79810002129799 24.142260657662078 42 22.829462547734735 25.272539958493688 29.72456252445554 22.173434969316038 43 24.286888859170766 23.05730149531692 29.8964323392621 22.759377306250215 44 22.84704577086336 22.87453503519121 29.15001213490047 25.12840705904496 45 22.793305497357565 23.172211573227933 28.769867803880196 25.264615125534306 46 23.76880290445128 24.115514346424167 29.194836971326964 22.92084577779759 47 21.91241078371645 24.33963852855664 31.365993551167183 22.38195713655973 48 21.461933560181677 24.021406955031527 30.45934313040808 24.05731635437872 49 22.736593411492 22.683843742106124 31.340733146109155 23.238829700292722 50 21.880216149818967 21.807654398034643 31.239691525877056 25.072437926269338 51 21.532761754756137 22.456995398643866 29.041540983768954 26.968701862831047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 258.0 1 682.5 2 1107.0 3 3042.5 4 4978.0 5 3275.0 6 1572.0 7 1507.0 8 1442.0 9 1456.5 10 1471.0 11 1481.5 12 1492.0 13 1429.0 14 1366.0 15 1312.5 16 1259.0 17 1238.0 18 1217.0 19 1297.5 20 1378.0 21 1354.0 22 1330.0 23 1496.0 24 1662.0 25 2147.0 26 3110.0 27 3588.0 28 4268.5 29 4949.0 30 5665.5 31 6382.0 32 7305.5 33 8229.0 34 8400.5 35 8572.0 36 9371.5 37 10171.0 38 10903.5 39 11636.0 40 13647.5 41 15659.0 42 17317.5 43 18976.0 44 21306.0 45 23636.0 46 28738.5 47 33841.0 48 37549.0 49 41257.0 50 40762.0 51 40267.0 52 35126.0 53 29985.0 54 26941.5 55 23898.0 56 22004.0 57 20110.0 58 18746.5 59 17383.0 60 16305.0 61 15227.0 62 13883.5 63 12540.0 64 11697.5 65 10855.0 66 9040.0 67 7225.0 68 6333.0 69 5441.0 70 4837.5 71 4234.0 72 3449.5 73 2665.0 74 2289.0 75 1406.0 76 899.0 77 764.0 78 629.0 79 435.5 80 242.0 81 173.5 82 105.0 83 92.5 84 80.0 85 56.0 86 32.0 87 17.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 403794.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.891156875937206 #Duplication Level Percentage of deduplicated Percentage of total 1 72.9114625572667 26.897882032541474 2 9.401500709459032 6.936644750837761 3 3.535846805751878 3.9132443760082207 4 2.0861333917815097 3.078394968813706 5 1.4994788874441658 2.765875543442925 6 1.2199951764217403 2.700422006475667 7 1.0413730360983464 2.6892219228752583 8 0.9436433800230111 2.7849676773894827 9 0.7620236063261732 2.5300739163731647 >10 6.482805912460791 38.747707348426985 >50 0.06325136322595534 1.6673994708575643 >100 0.047774965840881166 3.190573976318636 >500 0.002691547371317249 0.7116918688326094 >1k 0.002018660528487937 1.3859001408065776 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3151 0.7803483954689767 No Hit GCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC 1260 0.31204029777559844 No Hit CCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC 1172 0.29024700713730267 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCC 879 0.217685255352977 No Hit CTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGCT 803 0.19886377707444883 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 617 0.15280068549805098 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 568 0.14066578502899993 No Hit TCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC 479 0.11862484336072354 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTC 432 0.10698524495163377 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 405 0.10029866714215666 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20431209973402278 0.0 2 0.0 0.0 0.0 1.026265868239746 0.0 3 0.0 0.0 0.0 1.4767430917745188 0.0 4 0.0 0.0 0.0 2.0446069035201115 0.0 5 0.0 0.0 0.0 3.5736043626205443 0.0 6 0.0 0.0 0.0 4.481740689559528 0.0 7 0.0 0.0 0.0 5.356939429511088 0.0 8 0.0 0.0 0.0 6.647944248800131 0.0 9 0.0 0.0 0.0 7.179403359138571 0.0 10 0.0 0.0 0.0 8.328008836188749 0.0 11 0.0 0.0 0.0 10.05587007236363 0.0 12 0.0 0.0 0.0 11.400615165158472 0.0 13 0.0 0.0 0.0 11.881058163320901 0.0 14 0.0 0.0 0.0 12.09131388777446 0.0 15 0.0 0.0 0.0 12.500433389302467 0.0 16 0.0 0.0 0.0 13.30678514291941 0.0 17 0.0 0.0 0.0 14.232009390927058 0.0 18 0.0 0.0 0.0 15.20602089184089 0.0 19 0.0 0.0 0.0 15.810537056023616 0.0 20 0.0 0.0 0.0 16.39821295016766 0.0 21 0.0 0.0 0.0 17.081482141884226 0.0 22 0.0 0.0 0.0 17.783572811879324 0.0 23 0.0 0.0 0.0 18.46981381595566 0.0 24 0.0 0.0 0.0 19.038915882851157 0.0 25 0.0 0.0 0.0 19.570374993189596 0.0 26 0.0 0.0 0.0 20.042397856332684 0.0 27 0.0 0.0 0.0 20.52482206273496 0.0 28 0.0 0.0 0.0 21.014923451066633 0.0 29 0.0 0.0 0.0 21.49833826158883 0.0 30 0.0 0.0 0.0 22.02286314308781 0.0 31 0.0 0.0 0.0 22.512221578329545 0.0 32 0.0 0.0 0.0 23.002570617691198 0.0 33 0.0 0.0 0.0 23.4641921375751 0.0 34 0.0 0.0 0.0 23.931261980118574 0.0 35 0.0 0.0 0.0 24.41343853549087 0.0 36 0.0 0.0 0.0 24.90651173618231 0.0 37 0.0 0.0 0.0 25.388688291554605 0.0 38 0.0 0.0 0.0 25.843375582599048 0.0 39 0.0 0.0 0.0 26.3708722764578 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTA 30 2.1619908E-6 45.000004 38 AGCGATG 30 2.1619908E-6 45.000004 1 TATCGCG 30 2.1619908E-6 45.000004 1 TACAAGG 35 1.2093187E-7 45.000004 2 CGACGGT 25 3.8862952E-5 45.0 28 ACGCATC 25 3.8862952E-5 45.0 24 TAGCGAA 20 7.027844E-4 45.0 38 CAACCGG 20 7.027844E-4 45.0 2 GCTTACG 25 3.8862952E-5 45.0 1 TTGCGAG 20 7.027844E-4 45.0 1 ATAAGCG 20 7.027844E-4 45.0 12 CGAATAT 40 6.7957444E-9 45.0 14 CCGAATA 20 7.027844E-4 45.0 21 CGTTTAC 20 7.027844E-4 45.0 33 TAGTACG 20 7.027844E-4 45.0 1 CGTTTTT 1440 0.0 42.03125 1 AAGGGCG 170 0.0 41.02941 5 CGTGTAC 50 1.0786607E-9 40.5 18 CGTAAGG 50 1.0786607E-9 40.5 2 CTAGAAT 45 1.9230356E-8 40.0 41 >>END_MODULE