##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551515_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 631361 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.338177366039396 33.0 31.0 34.0 30.0 34.0 2 32.45980350385912 34.0 31.0 34.0 31.0 34.0 3 32.46917690513035 34.0 31.0 34.0 31.0 34.0 4 35.94262078272177 37.0 35.0 37.0 35.0 37.0 5 36.033497476087376 37.0 35.0 37.0 35.0 37.0 6 36.06483295610594 37.0 35.0 37.0 35.0 37.0 7 36.1929086528943 37.0 37.0 37.0 35.0 37.0 8 36.08414520377407 37.0 37.0 37.0 35.0 37.0 9 37.94990663027966 39.0 38.0 39.0 35.0 39.0 10 37.672116269455984 39.0 37.0 39.0 35.0 39.0 11 37.6216364330391 39.0 37.0 39.0 35.0 39.0 12 37.52280549479616 39.0 37.0 39.0 35.0 39.0 13 37.47003853579806 39.0 37.0 39.0 35.0 39.0 14 38.7800180879085 40.0 38.0 41.0 35.0 41.0 15 38.816296857107105 40.0 38.0 41.0 35.0 41.0 16 38.87753440583121 40.0 38.0 41.0 35.0 41.0 17 38.7914996333318 40.0 38.0 41.0 35.0 41.0 18 38.7235464338152 40.0 38.0 41.0 35.0 41.0 19 38.657810666164046 40.0 38.0 41.0 35.0 41.0 20 38.52886858706825 40.0 38.0 41.0 35.0 41.0 21 38.460638208568476 40.0 37.0 41.0 35.0 41.0 22 38.43287754549299 40.0 37.0 41.0 35.0 41.0 23 38.38066019282154 40.0 37.0 41.0 34.0 41.0 24 38.29974768793131 40.0 37.0 41.0 34.0 41.0 25 38.21081283132788 40.0 37.0 41.0 34.0 41.0 26 38.21552962568166 40.0 37.0 41.0 34.0 41.0 27 38.1932745291521 40.0 37.0 41.0 34.0 41.0 28 38.11129290532675 40.0 37.0 41.0 34.0 41.0 29 38.07129043447409 40.0 36.0 41.0 34.0 41.0 30 37.93546956495571 40.0 36.0 41.0 34.0 41.0 31 37.904914937729764 40.0 36.0 41.0 34.0 41.0 32 37.762837742591 40.0 36.0 41.0 33.0 41.0 33 37.647865484247525 40.0 36.0 41.0 33.0 41.0 34 37.49625016432754 40.0 36.0 41.0 33.0 41.0 35 37.39828402451212 40.0 36.0 41.0 33.0 41.0 36 37.33030389903716 40.0 35.0 41.0 33.0 41.0 37 37.272267371598815 40.0 35.0 41.0 33.0 41.0 38 37.11217829419302 40.0 35.0 41.0 32.0 41.0 39 37.08060681606878 40.0 35.0 41.0 32.0 41.0 40 37.010836906302416 40.0 35.0 41.0 32.0 41.0 41 36.9008174404184 39.0 35.0 41.0 32.0 41.0 42 36.77061617679901 39.0 35.0 41.0 32.0 41.0 43 36.775150824963845 39.0 35.0 41.0 32.0 41.0 44 36.7677604413323 39.0 35.0 41.0 32.0 41.0 45 36.667833458195865 39.0 35.0 41.0 31.0 41.0 46 36.61114164479592 39.0 35.0 41.0 31.0 41.0 47 36.52214343299634 39.0 35.0 41.0 31.0 41.0 48 36.49154445713308 39.0 35.0 41.0 31.0 41.0 49 36.44255505170576 39.0 35.0 41.0 31.0 41.0 50 36.35688932322395 39.0 35.0 41.0 31.0 41.0 51 35.515472130841154 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 11.0 10 16.0 11 12.0 12 12.0 13 15.0 14 17.0 15 32.0 16 54.0 17 88.0 18 141.0 19 267.0 20 503.0 21 816.0 22 1304.0 23 1912.0 24 2619.0 25 3669.0 26 5077.0 27 6045.0 28 6374.0 29 6621.0 30 7478.0 31 8996.0 32 11531.0 33 16110.0 34 31580.0 35 46321.0 36 42086.0 37 62242.0 38 116636.0 39 252422.0 40 345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.18173121241255 19.715661879653638 23.650811500868755 14.451795407065054 2 31.63863463216765 26.520326722746574 24.141022331122766 17.700016313963012 3 31.149057353875197 25.21679356184497 27.120458818330555 16.513690265949275 4 28.074588072433997 24.168106677479287 29.250777289062835 18.506527961023885 5 26.712134579107673 28.064134465068317 25.05159488786922 20.17213606795478 6 26.05054794325275 35.00659685979971 24.32063431222391 14.622220884723635 7 76.68069456301545 6.097620853996367 12.397661559709897 4.824023023278283 8 77.48831492600905 7.756101501359761 9.902417159121327 4.853166413509862 9 71.25257974439346 7.83988874827555 11.912835921129117 8.994695586201871 10 39.135930157231755 27.42567247581019 18.51397219657217 14.92442517038588 11 30.154539162222566 23.481019575171732 26.70801649135756 19.656424771248147 12 26.55944855637266 20.46420352223213 30.687039585910437 22.28930833548477 13 25.133798254881125 22.343635416188203 32.427248436314564 20.09531789261611 14 21.589550193946096 26.275142113624376 29.630591690015695 22.504716002413833 15 19.870565334254096 24.365299725513612 34.15320236758368 21.61093257264861 16 22.769857498325045 22.92887904067562 30.848912112088012 23.45235134891132 17 22.210747892251817 24.288798326155717 29.260122180495785 24.240331601096678 18 22.69335609896715 23.355101122812464 30.666290759169478 23.28525201905091 19 23.61549097901201 24.67019660701247 28.26956368860288 23.444748725372648 20 25.316894771770826 24.836979160892106 28.95665079091043 20.889475276426637 21 24.458907027833522 25.86048235478593 28.4350791385594 21.24553147882115 22 22.881679419539694 23.01472533146647 28.56020565096672 25.543389598027122 23 22.589295189281568 25.20950771428707 29.086212167048647 23.114984929382715 24 23.182299825298045 24.300835813425284 28.942712647756196 23.574151713520475 25 22.62097278735937 26.74697993699326 27.59593956547839 23.036107710168984 26 22.233714150858226 24.983646439992334 28.473884196204708 24.30875521294473 27 23.64400081728203 24.362290353696224 28.30615131438274 23.68755751463901 28 21.341356213006506 24.868023207008353 30.440429484874738 23.350191095110404 29 23.629270734175854 23.820445038575393 28.670443692277477 23.879840534971276 30 23.181191109365322 25.11336620412094 28.354459651451386 23.35098303506235 31 24.025082322158003 25.188283723574944 26.99659940984635 23.790034544420706 32 24.19202326402803 25.686572341338792 27.429632175569918 22.69177221906326 33 22.99825298046601 26.12182253892781 26.206718501776322 24.673205978829863 34 22.180179010106738 25.98259949537586 27.379106406635824 24.458115087881577 35 22.338250224514976 24.830960417257323 27.393994877732393 25.436794480495312 36 23.124329820815667 28.027705227278847 26.337863757818425 22.51010119408706 37 21.28101038866829 27.556025791900357 28.384711757615687 22.778252061815664 38 20.89470208010948 28.06920288076077 27.2452685547571 23.790826484372648 39 22.203778820674703 27.310524406797377 27.88927412367885 22.596422648849074 40 22.253195873676074 25.74691816567701 28.36823940661523 23.631646554031686 41 20.33068244633419 27.236715603276096 26.76440261593605 25.66819933445366 42 20.950137876745632 25.776219943898976 28.09707916706924 25.176563012286156 43 22.568546362540605 24.61872051013604 27.981614322075643 24.831118805247712 44 22.01688099201566 24.06293705186098 29.122166240866953 24.798015715256405 45 21.995973777284313 24.052958608466472 28.201456852735596 25.74961076151362 46 23.31724639310949 25.634145916520023 27.707286322721863 23.341321367648618 47 20.87316131341657 25.626543292981353 30.122069624192815 23.378225769409262 48 21.140995405164396 25.331466466886614 28.619284371381827 24.908253756567163 49 21.009216597160737 24.455580880035352 30.491113641799224 24.044088881004686 50 20.954414352486136 23.693576258273794 30.12032735629854 25.23168203294153 51 20.855263470502614 23.992929560109033 28.02073615570173 27.131070813686627 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 274.0 1 752.0 2 1230.0 3 4492.0 4 7754.0 5 4979.0 6 2204.0 7 2136.0 8 2068.0 9 2083.0 10 2098.0 11 2019.5 12 1941.0 13 1934.0 14 1927.0 15 1879.0 16 1831.0 17 1657.0 18 1483.0 19 1498.0 20 1513.0 21 1673.5 22 1834.0 23 2089.0 24 2344.0 25 2790.0 26 3920.0 27 4604.0 28 5778.5 29 6953.0 30 7832.5 31 8712.0 32 10071.5 33 11431.0 34 12607.0 35 13783.0 36 15221.5 37 16660.0 38 18340.5 39 20021.0 40 23036.5 41 26052.0 42 28901.5 43 31751.0 44 44839.5 45 57928.0 46 56799.5 47 55671.0 48 55752.5 49 55834.0 50 49798.5 51 43763.0 52 41008.5 53 38254.0 54 35689.0 55 33124.0 56 32384.5 57 31645.0 58 30597.0 59 29549.0 60 28220.5 61 26892.0 62 25339.0 63 23786.0 64 21433.5 65 19081.0 66 16747.0 67 14413.0 68 12160.0 69 9907.0 70 8366.5 71 6826.0 72 5983.5 73 5141.0 74 4188.5 75 2694.0 76 2152.0 77 1708.0 78 1264.0 79 962.0 80 660.0 81 511.0 82 362.0 83 244.0 84 126.0 85 76.5 86 27.0 87 19.0 88 11.0 89 7.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 631361.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.530684977126377 #Duplication Level Percentage of deduplicated Percentage of total 1 72.36614439557017 22.093879575503923 2 8.313651961238602 5.076429780760893 3 3.1594368525709586 2.8937931375290282 4 1.9043953746724118 2.3256998102407986 5 1.3252108030070915 2.0229796777447095 6 1.125448143804032 2.0616421641943514 7 0.9845813924322525 2.104196102868268 8 0.9018943358621957 2.2028361480690646 9 0.8528585700580494 2.3434520699236296 >10 8.930871570311302 48.55122755846708 >50 0.08026160181865429 1.6456147963445726 >100 0.046384951700349404 2.5831474186655514 >500 0.006254150791058346 1.323556746855985 >1k 0.002605896162940978 2.7715450128321164 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4833 0.7654891575501179 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 3748 0.5936381879780348 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 3488 0.5524573104768904 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 3369 0.5336091396205974 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1980 0.31360822097025315 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 900 0.14254919135011507 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 847 0.1341546278594972 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 844 0.13367946388833013 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 843 0.1335210758979411 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 798 0.12639361633043536 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 653 0.10342735772402793 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5838799038901674E-4 0.0 0.0 0.1457169511578954 0.0 2 1.5838799038901674E-4 0.0 0.0 0.7667562614732301 0.0 3 1.5838799038901674E-4 0.0 0.0 1.0821067503377624 0.0 4 1.5838799038901674E-4 0.0 0.0 1.5249595714654531 0.0 5 1.5838799038901674E-4 0.0 0.0 2.951243424918549 0.0 6 1.5838799038901674E-4 0.0 0.0 3.698359575583541 0.0 7 1.5838799038901674E-4 0.0 0.0 4.451336081892927 0.0 8 1.5838799038901674E-4 0.0 0.0 5.49131162678721 0.0 9 1.5838799038901674E-4 0.0 0.0 5.939549639588128 0.0 10 1.5838799038901674E-4 0.0 0.0 7.31166480032818 0.0 11 1.5838799038901674E-4 0.0 0.0 8.325189550827497 0.0 12 1.5838799038901674E-4 0.0 0.0 9.671170693153362 0.0 13 1.5838799038901674E-4 0.0 0.0 10.015822960239863 0.0 14 1.5838799038901674E-4 0.0 0.0 10.154412451830252 0.0 15 1.5838799038901674E-4 0.0 0.0 10.499698270878309 0.0 16 1.5838799038901674E-4 0.0 0.0 10.987374893286091 0.0 17 1.5838799038901674E-4 0.0 0.0 11.561372970455889 0.0 18 1.5838799038901674E-4 0.0 0.0 12.228819961955205 0.0 19 1.5838799038901674E-4 0.0 0.0 12.71760530029571 0.0 20 1.5838799038901674E-4 0.0 0.0 13.119118855931868 0.0 21 1.5838799038901674E-4 0.0 0.0 13.58097823590624 0.0 22 1.5838799038901674E-4 0.0 0.0 14.08180106151631 0.0 23 1.5838799038901674E-4 0.0 0.0 14.566309924116315 0.0 24 1.5838799038901674E-4 0.0 0.0 14.982078398887483 0.0 25 1.5838799038901674E-4 0.0 0.0 15.345578836830276 0.0 26 1.5838799038901674E-4 0.0 0.0 15.678035228656823 0.0 27 1.5838799038901674E-4 0.0 0.0 16.034249819041722 0.0 28 1.5838799038901674E-4 0.0 0.0 16.403610612628906 0.0 29 1.5838799038901674E-4 0.0 0.0 16.760617142965753 0.0 30 1.5838799038901674E-4 0.0 0.0 17.18778955304493 0.0 31 1.5838799038901674E-4 0.0 0.0 17.553982586824336 0.0 32 1.5838799038901674E-4 0.0 0.0 17.909563625247678 0.0 33 1.5838799038901674E-4 0.0 0.0 18.271955347257748 0.0 34 1.5838799038901674E-4 0.0 0.0 18.634663845248596 0.0 35 1.5838799038901674E-4 0.0 0.0 19.01954666189391 0.0 36 1.5838799038901674E-4 0.0 0.0 19.38684841160604 0.0 37 1.5838799038901674E-4 0.0 0.0 19.756367593183615 0.0 38 1.5838799038901674E-4 0.0 0.0 20.127153878684304 0.0 39 1.5838799038901674E-4 0.0 0.0 20.493980464425267 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATAACG 20 7.030869E-4 45.0 17 TCCGATA 20 7.030869E-4 45.0 14 TAAGTCG 20 7.030869E-4 45.0 10 GTCCGTT 20 7.030869E-4 45.0 9 CGTAAGG 75 0.0 45.0 2 CGTTTAG 20 7.030869E-4 45.0 27 GGTTACG 20 7.030869E-4 45.0 1 CGTTTTT 2115 0.0 41.489365 1 CGGTCTA 40 3.4549157E-7 39.375 31 ATAGTAG 40 3.4549157E-7 39.375 1 CGAATAT 75 0.0 39.0 14 TACGGCT 435 0.0 38.793102 7 TACGCGG 70 0.0 38.57143 2 TTACGGG 105 0.0 38.57143 3 ATAACGC 35 6.2438157E-6 38.57143 11 ATAGTCG 35 6.2438157E-6 38.57143 1 TATTAGT 130 0.0 38.076927 30 CTACGAA 90 0.0 37.5 11 CTAACGG 60 1.546141E-10 37.499996 2 ACATGCG 30 1.1393393E-4 37.499996 1 >>END_MODULE