##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551512_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 591338 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.279156759755 33.0 31.0 34.0 30.0 34.0 2 32.40057801122201 34.0 31.0 34.0 30.0 34.0 3 32.40223526984567 34.0 31.0 34.0 30.0 34.0 4 35.908194636569945 37.0 35.0 37.0 35.0 37.0 5 36.00272433024767 37.0 35.0 37.0 35.0 37.0 6 36.01863063087439 37.0 35.0 37.0 35.0 37.0 7 36.14913805640767 37.0 36.0 37.0 35.0 37.0 8 36.00726995390115 37.0 36.0 37.0 35.0 37.0 9 37.87338375007187 39.0 38.0 39.0 35.0 39.0 10 37.549795548400404 39.0 37.0 39.0 35.0 39.0 11 37.53098058978114 39.0 37.0 39.0 35.0 39.0 12 37.45971846896361 39.0 37.0 39.0 35.0 39.0 13 37.43832123083583 39.0 37.0 39.0 35.0 39.0 14 38.749376836935895 40.0 38.0 41.0 35.0 41.0 15 38.76871095718523 40.0 38.0 41.0 35.0 41.0 16 38.835878972770224 40.0 38.0 41.0 35.0 41.0 17 38.73906462970416 40.0 38.0 41.0 35.0 41.0 18 38.649038282674205 40.0 38.0 41.0 35.0 41.0 19 38.536456307560144 40.0 37.0 41.0 35.0 41.0 20 38.36229871917583 40.0 37.0 41.0 34.0 41.0 21 38.316152521907945 40.0 37.0 41.0 34.0 41.0 22 38.28372436745144 40.0 37.0 41.0 34.0 41.0 23 38.19214899093243 40.0 37.0 41.0 34.0 41.0 24 38.1330964693627 40.0 36.0 41.0 34.0 41.0 25 38.057236301404615 40.0 36.0 41.0 34.0 41.0 26 38.050801741136205 40.0 36.0 41.0 34.0 41.0 27 38.00699599890418 40.0 36.0 41.0 34.0 41.0 28 37.920214834832194 40.0 36.0 41.0 34.0 41.0 29 37.860545068979164 40.0 36.0 41.0 34.0 41.0 30 37.693928007332524 40.0 36.0 41.0 33.0 41.0 31 37.6477141668555 40.0 36.0 41.0 33.0 41.0 32 37.415305628929644 40.0 35.0 41.0 33.0 41.0 33 37.23093560704707 40.0 35.0 41.0 33.0 41.0 34 37.06562236825639 40.0 35.0 41.0 32.0 41.0 35 36.88685658625017 40.0 35.0 41.0 31.0 41.0 36 36.81145977427461 40.0 35.0 41.0 31.0 41.0 37 36.70735349326443 40.0 35.0 41.0 31.0 41.0 38 36.60063787546209 40.0 35.0 41.0 30.0 41.0 39 36.573878221930606 40.0 35.0 41.0 31.0 41.0 40 36.50529308111435 39.0 35.0 41.0 30.0 41.0 41 36.413636532744384 39.0 35.0 41.0 30.0 41.0 42 36.26318619807961 39.0 35.0 41.0 30.0 41.0 43 36.25091233778313 39.0 35.0 41.0 30.0 41.0 44 36.23839327085356 39.0 35.0 41.0 30.0 41.0 45 36.15641646570997 39.0 35.0 41.0 30.0 41.0 46 36.0705231187578 39.0 35.0 41.0 29.0 41.0 47 35.96205046859833 39.0 35.0 41.0 29.0 41.0 48 35.911449966009286 39.0 35.0 41.0 29.0 41.0 49 35.880208949873 39.0 35.0 41.0 29.0 41.0 50 35.77840930229412 38.0 35.0 41.0 29.0 41.0 51 34.90247202107762 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 4.0 10 11.0 11 10.0 12 13.0 13 16.0 14 21.0 15 27.0 16 53.0 17 104.0 18 174.0 19 279.0 20 580.0 21 1104.0 22 1775.0 23 2481.0 24 3435.0 25 4914.0 26 6346.0 27 7453.0 28 7271.0 29 7163.0 30 7677.0 31 9204.0 32 11703.0 33 15861.0 34 29751.0 35 42872.0 36 40642.0 37 58818.0 38 107239.0 39 224028.0 40 297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.2375392753383 18.74258038549865 22.644917120158013 15.374963219005036 2 32.1589344841698 27.58016565821916 23.130088037636682 17.13081181997436 3 30.11864618881249 26.341618499064833 27.74301668419753 15.796718627925147 4 26.797702836617976 23.62844938089553 31.654823468134975 17.91902431435152 5 27.160777761618565 27.302321176721268 26.226625043545315 19.310276018114852 6 24.06897578034897 35.4709151111547 26.109433183729102 14.350675924767224 7 73.78960932664567 6.323456297413661 15.33200978120804 4.554924594732624 8 73.71773841694598 9.029861094670053 11.980457876882596 5.271942611501375 9 67.85036645708546 7.725869130683298 13.901355908126995 10.52240850410425 10 39.03283739587173 22.14198986028295 22.418819693643908 16.406353050201407 11 30.808099597861123 23.47726680849193 25.95114807436694 19.763485519280007 12 24.868180296209612 21.273620163087777 31.509221460484525 22.34897808021808 13 24.291860154429447 22.56662010559105 33.94995755388627 19.191562186093233 14 21.11905543022772 27.12272845648343 30.616161991957224 21.142054121331626 15 20.006493748076394 23.325238695974214 35.27086032015531 21.39740723579408 16 22.099543746554424 23.169151990908755 31.231038762940994 23.500265499595834 17 22.241763593748416 24.839939256398203 30.272703597604078 22.645593552249306 18 22.319891500292556 23.731605274817447 30.83667885371818 23.111824371171817 19 23.012557961774824 25.779165215156137 28.657721979646155 22.550554843422884 20 24.51761936489791 25.004650470627627 30.412217716432906 20.06551244804156 21 23.220391721824065 27.621089799742276 29.17214858507317 19.986369893360482 22 22.01837189559947 23.88718465581444 29.687758946659947 24.40668450192614 23 22.748580338148404 26.069523690342916 29.243681278727223 21.938214692781454 24 22.722368594610863 25.093601290632428 29.127334959025124 23.05669515573158 25 21.53945797496525 28.3311743875753 27.676049907159694 22.45331773029976 26 21.385738782219306 25.347094216843836 29.656304854414905 23.610862146521956 27 23.831548116305733 25.726234404012594 28.37040744887019 22.07181003081148 28 21.57683084800909 26.15171018943481 30.4396132161302 21.831845746425902 29 24.110069029894916 24.16012500465047 28.38478163081013 23.345024334644485 30 22.724228782861918 27.32126127527742 28.268266203085208 21.686243738775453 31 25.638467340167555 24.84230676871772 25.214344418927926 24.304881472186803 32 24.96643205746967 26.40892349214831 25.817383628314094 22.80726082206792 33 23.22918533901085 25.383114225705093 26.355147140890654 25.032553294393395 34 23.555056498990425 24.692646168519527 26.42059194572309 25.331705386766963 35 23.150550108398242 24.984019291843243 26.1835024977255 25.68192810203302 36 24.51288434025887 27.916183299568097 25.236328461894892 22.33460389827814 37 22.110366660015085 27.690254981076812 26.6000155579381 23.599362800970002 38 22.3417064352367 26.15576878198255 26.579722595199364 24.922802187581382 39 22.69091450236582 25.221616063909302 27.030057259976527 25.057412173748343 40 21.920120134339413 23.870781177600627 29.72462449563532 24.48447419242464 41 20.346062657904614 26.747985077908066 26.5303430525351 26.37560921165222 42 21.54791337610639 25.695625851881665 28.24256178361614 24.51389898839581 43 23.100155917597043 25.43908898125945 27.44065153939033 24.020103561753174 44 22.57981053137123 24.26277357450392 28.145155562470194 25.012260331654655 45 22.868647034352605 23.544233585529764 27.37334654630685 26.213772833810783 46 24.305050580209624 25.66890678427566 26.7045243160426 23.321518319472112 47 21.02672244976646 24.967784921652253 30.343898075212483 23.6615945533688 48 21.49633542914543 25.118629278010207 28.07193178858791 25.31310350425645 49 22.0860151047286 23.741582648163995 30.26035871193801 23.912043535169396 50 21.7428949264211 23.582451998687723 29.418369866303195 25.25628320858798 51 21.565838826525606 23.303085544984427 27.358295932275617 27.77277969621435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 307.0 1 759.0 2 1211.0 3 5156.5 4 9102.0 5 6012.0 6 2922.0 7 2832.0 8 2742.0 9 2724.0 10 2706.0 11 2665.5 12 2625.0 13 2581.0 14 2537.0 15 2534.5 16 2532.0 17 2376.0 18 2220.0 19 2239.0 20 2258.0 21 2163.5 22 2069.0 23 2197.5 24 2326.0 25 2853.5 26 3998.0 27 4615.0 28 5658.0 29 6701.0 30 7479.5 31 8258.0 32 9502.5 33 10747.0 34 12353.5 35 13960.0 36 14534.0 37 15108.0 38 15887.5 39 16667.0 40 18954.0 41 21241.0 42 23476.5 43 25712.0 44 28283.0 45 30854.0 46 33547.5 47 36241.0 48 50217.0 49 64193.0 50 58509.5 51 52826.0 52 51080.0 53 49334.0 54 44179.0 55 39024.0 56 34977.5 57 30931.0 58 28651.0 59 26371.0 60 25219.0 61 24067.0 62 21886.0 63 19705.0 64 17933.5 65 16162.0 66 13788.5 67 11415.0 68 10071.0 69 8727.0 70 7677.5 71 6628.0 72 5740.5 73 4853.0 74 4072.5 75 2701.5 76 2111.0 77 1755.5 78 1400.0 79 1028.0 80 656.0 81 504.5 82 353.0 83 239.0 84 125.0 85 107.0 86 89.0 87 58.0 88 27.0 89 15.5 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 591338.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.912844563426205 #Duplication Level Percentage of deduplicated Percentage of total 1 73.07230186165754 24.78089614926151 2 8.555039269930658 5.802514339903312 3 3.4500415126383612 3.510021646664177 4 2.107187409961347 2.8584287640011117 5 1.5621574822396396 2.6488601939393064 6 1.2088065340984742 2.4596440858881303 7 1.0398195308704452 2.468426668709691 8 0.906006044997941 2.4580193742031757 9 0.8117211836743238 2.477499689770891 >10 7.176377668057161 41.103698881009336 >50 0.06902591519751186 1.611804383564847 >100 0.033512582016089754 2.350873179517762 >500 0.004501690121564295 1.2123306597888335 >1k 0.002500938956424608 2.381915086715377 >5k 0.0010003755825698432 1.875066897062511 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5827 0.9853924489885649 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTC 5227 0.8839276352948736 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGC 4974 0.8411433055207005 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCG 4879 0.8250780433525328 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 2014 0.340583557965157 No Hit GAACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCT 1165 0.19701084658858387 No Hit CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGCT 1010 0.17079910305104695 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCT 997 0.1686006987543503 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGCTCCAT 917 0.1550720569285248 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 907 0.15338097670029663 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTA 844 0.14272717126245904 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 826 0.1396832268516483 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTC 788 0.1332571219843812 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCC 747 0.1263236930486456 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6910802282281876E-4 0.0 0.0 0.1750268036216174 0.0 2 1.6910802282281876E-4 0.0 0.0 0.7921019789020831 0.0 3 1.6910802282281876E-4 0.0 0.0 1.107657549489463 0.0 4 1.6910802282281876E-4 0.0 0.0 1.6452519540432038 0.0 5 1.6910802282281876E-4 0.0 0.0 3.384020644707426 0.0 6 1.6910802282281876E-4 0.0 0.0 4.163946845966266 0.0 7 1.6910802282281876E-4 0.0 0.0 4.962982253804085 0.0 8 1.6910802282281876E-4 0.0 0.0 6.175317669420872 0.0 9 3.382160456456375E-4 0.0 0.0 6.681119765683923 0.0 10 3.382160456456375E-4 0.0 0.0 8.36847961741001 0.0 11 3.382160456456375E-4 0.0 0.0 9.508775015304277 0.0 12 3.382160456456375E-4 0.0 0.0 11.272233477300631 0.0 13 3.382160456456375E-4 0.0 0.0 11.704304475612933 0.0 14 3.382160456456375E-4 0.0 0.0 11.906050346840555 0.0 15 3.382160456456375E-4 0.0 0.0 12.309880305341446 0.0 16 3.382160456456375E-4 0.0 0.0 12.851025978374466 0.0 17 3.382160456456375E-4 0.0 0.0 13.446286218710789 0.0 18 5.073240684684562E-4 0.0 0.0 14.109696992244706 0.0 19 5.073240684684562E-4 0.0 0.0 14.69007572657262 0.0 20 5.073240684684562E-4 0.0 0.0 15.098978925758196 0.0 21 5.073240684684562E-4 0.0 0.0 15.597509377039865 0.0 22 5.073240684684562E-4 0.0 0.0 16.109399362124538 0.0 23 5.073240684684562E-4 0.0 0.0 16.603533004812814 0.0 24 5.073240684684562E-4 0.0 0.0 17.012267095975567 0.0 25 5.073240684684562E-4 0.0 0.0 17.37770953329568 0.0 26 6.76432091291275E-4 0.0 0.0 17.747210563163538 0.0 27 6.76432091291275E-4 0.0 0.0 18.125505210218183 0.0 28 8.455401141140938E-4 0.0 0.0 18.504138073318476 0.0 29 8.455401141140938E-4 0.0 0.0 18.881925396304652 0.0 30 8.455401141140938E-4 0.0 0.0 19.32160625564398 0.0 31 8.455401141140938E-4 0.0 0.0 19.68873977319232 0.0 32 8.455401141140938E-4 0.0 0.0 20.083776114506424 0.0 33 8.455401141140938E-4 0.0 0.0 20.45953414121873 0.0 34 8.455401141140938E-4 0.0 0.0 20.83106446736046 0.0 35 8.455401141140938E-4 0.0 0.0 21.209359114415108 0.0 36 8.455401141140938E-4 0.0 0.0 21.564316854320204 0.0 37 0.0010146481369369125 0.0 0.0 21.94683920194542 0.0 38 0.0010146481369369125 0.0 0.0 22.314818259607872 0.0 39 0.0010146481369369125 0.0 0.0 22.689730746206063 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 25 3.8885006E-5 45.0 21 TAGCGAG 25 3.8885006E-5 45.0 1 TAACGCC 20 7.030506E-4 45.0 12 TCTAGCG 20 7.030506E-4 45.0 1 ATTCCGG 20 7.030506E-4 45.0 2 CGTAAGG 25 3.8885006E-5 45.0 2 TGTAGCG 35 1.210592E-7 45.0 1 GATTACG 20 7.030506E-4 45.0 1 ATCTCGG 30 2.163708E-6 44.999996 2 CGTTTTT 2810 0.0 42.51779 1 TACGGCT 630 0.0 42.5 7 GCTACGA 85 0.0 42.35294 10 CGTTAGG 70 0.0 41.785713 2 TTGAGCG 50 1.0804797E-9 40.5 1 GTATGCG 45 1.9255822E-8 40.000004 1 CGAATAT 90 0.0 40.000004 14 ACGGCTG 675 0.0 39.666668 8 CGATGAA 580 0.0 39.56897 19 TCACGAC 40 3.4544246E-7 39.375 25 TCGAATG 80 0.0 39.375 44 >>END_MODULE