##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551506_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 424107 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15895988512333 33.0 31.0 34.0 30.0 34.0 2 32.28695824402804 33.0 31.0 34.0 30.0 34.0 3 32.31940760232677 34.0 31.0 34.0 30.0 34.0 4 35.85023354955236 37.0 35.0 37.0 35.0 37.0 5 35.908933358798606 37.0 35.0 37.0 35.0 37.0 6 35.92475247991663 37.0 35.0 37.0 35.0 37.0 7 36.03000893642406 37.0 35.0 37.0 35.0 37.0 8 35.75188572695098 37.0 35.0 37.0 35.0 37.0 9 37.65563171558121 39.0 37.0 39.0 35.0 39.0 10 37.480690014548216 39.0 37.0 39.0 35.0 39.0 11 37.4228201845289 39.0 37.0 39.0 35.0 39.0 12 37.327506973476034 39.0 37.0 39.0 35.0 39.0 13 37.21228133466319 39.0 37.0 39.0 34.0 39.0 14 38.507746865767366 40.0 38.0 41.0 34.0 41.0 15 38.42794389151794 40.0 38.0 41.0 34.0 41.0 16 38.619360208626595 40.0 38.0 41.0 35.0 41.0 17 38.4335321039266 40.0 38.0 41.0 34.0 41.0 18 38.426793238498774 40.0 38.0 41.0 34.0 41.0 19 38.38055254923875 40.0 37.0 41.0 34.0 41.0 20 38.04078216110557 40.0 36.0 41.0 33.0 41.0 21 38.14248998483873 40.0 37.0 41.0 34.0 41.0 22 38.02664421950121 40.0 37.0 41.0 34.0 41.0 23 37.87754976927992 40.0 36.0 41.0 33.0 41.0 24 37.870829767016346 40.0 36.0 41.0 33.0 41.0 25 37.92871138651331 40.0 36.0 41.0 33.0 41.0 26 37.88416838203567 40.0 36.0 41.0 33.0 41.0 27 37.7102452918721 40.0 36.0 41.0 33.0 41.0 28 37.68364351449045 40.0 36.0 41.0 33.0 41.0 29 37.65138514572973 40.0 36.0 41.0 33.0 41.0 30 37.5187417326288 40.0 36.0 41.0 33.0 41.0 31 37.449219182894886 40.0 35.0 41.0 33.0 41.0 32 37.14767263921605 40.0 35.0 41.0 32.0 41.0 33 37.00465920156942 40.0 35.0 41.0 31.0 41.0 34 36.611739490270146 40.0 35.0 41.0 30.0 41.0 35 36.61596483906184 40.0 35.0 41.0 30.0 41.0 36 36.55593753463159 39.0 35.0 41.0 30.0 41.0 37 36.426340522556806 39.0 35.0 41.0 30.0 41.0 38 36.3009900803335 39.0 35.0 41.0 30.0 41.0 39 36.02954443100444 39.0 35.0 41.0 29.0 41.0 40 36.08173409068938 39.0 35.0 41.0 29.0 41.0 41 35.86493738608417 39.0 35.0 41.0 27.0 41.0 42 35.86479119656124 39.0 35.0 41.0 28.0 41.0 43 35.94664789781824 39.0 35.0 41.0 29.0 41.0 44 36.06349576875647 39.0 35.0 41.0 29.0 41.0 45 35.96025059713704 39.0 35.0 41.0 29.0 41.0 46 35.88675735132879 39.0 35.0 41.0 28.0 41.0 47 35.711261544845996 38.0 35.0 41.0 28.0 41.0 48 35.68014675541785 38.0 35.0 41.0 28.0 41.0 49 35.72471098095528 38.0 35.0 41.0 28.0 41.0 50 35.618480713593506 38.0 35.0 41.0 28.0 41.0 51 34.72635443414044 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 11.0 11 10.0 12 5.0 13 9.0 14 10.0 15 21.0 16 31.0 17 48.0 18 131.0 19 260.0 20 578.0 21 1202.0 22 2128.0 23 2947.0 24 3560.0 25 4184.0 26 4698.0 27 4960.0 28 4793.0 29 4979.0 30 5719.0 31 7265.0 32 9266.0 33 12350.0 34 22407.0 35 31420.0 36 28834.0 37 43512.0 38 82259.0 39 146350.0 40 154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.13712813040105 17.253428969576074 19.771661396770153 13.837781503252716 2 28.156337905292766 35.14844131315918 21.19205766469311 15.503163116854946 3 27.04647647881313 33.81009980971783 24.765919921151973 14.377503790317068 4 25.133987413553655 20.7763606825636 37.629890570068405 16.459761333814342 5 33.24231856583362 24.04322494087577 23.345287863675914 19.3691686296147 6 22.898466660536137 39.67300704774974 23.848226980455404 13.580299311258715 7 67.51692379517434 5.6122629430780435 21.691695727729087 5.179117534018538 8 66.14722228116962 15.646523165144647 12.134909350706307 6.071345202979437 9 61.10085426555091 7.228836119186903 12.978800161280054 18.691509453982132 10 41.15612333679944 22.50799916058919 20.37033107211152 15.965546430499849 11 32.30929930418503 20.925851259234108 26.500859452921077 20.263989983659783 12 24.6058188145916 17.910574454088238 31.39042741572292 26.093179315597244 13 25.920109783615924 20.445076360446773 35.8628836590766 17.771930196860698 14 20.600697465498094 28.923125532000178 27.924792564140656 22.551384438361076 15 17.087904703294214 22.225287486412626 37.40942733791236 23.27738047238079 16 18.8954674174206 22.65277394619754 28.66658649821861 29.785172138163247 17 19.469379189685622 26.166981445720065 31.337846345379823 23.02579301921449 18 19.567939222884792 22.942795096520456 30.74129877601643 26.747966904578323 19 19.836267734321762 24.601810392188764 27.998830483816583 27.563091389672888 20 23.675629027580303 23.864024880513643 32.873543704772615 19.586802387133435 21 22.020150575208614 29.65265840931652 28.51803907976053 19.809151935714336 22 19.803021407333528 21.537489359996417 31.75330753795622 26.906181694713833 23 22.035005317054424 27.111318605917845 29.05304557576272 21.80063050126501 24 22.33893805101071 24.877448379772087 27.032093316073535 25.75152025314366 25 18.74880631538739 32.62195625160631 25.469280158073314 23.159957274932978 26 18.76436842589252 22.223401169987763 33.04496270988218 25.967267694237538 27 24.88051364396249 24.335368197176656 26.34028676725449 24.443831391606363 28 19.013126404421527 26.00287191675686 31.33171581699901 23.652285861822605 29 23.185894125774865 20.753489095912116 31.244473682349028 24.81614309596399 30 21.56248305262587 27.067933328145966 28.423251679411095 22.946331939817075 31 26.878594317000193 21.265152426156604 25.05546949236867 26.800783764474534 32 30.552902923083092 24.95478735319153 24.059965999146442 20.43234372457894 33 27.324943941033748 22.34766226447571 23.390795247425768 26.936598547064772 34 24.970113674143555 21.1772029228473 30.194738591911946 23.657944811097202 35 27.73993355450393 20.86619650229777 25.070795813320697 26.3230741298776 36 25.64753706022301 26.465962599061086 27.000733305510167 20.88576703520574 37 24.535081948659183 22.724218180789283 28.595849632286193 24.144850238265345 38 28.212220029379374 24.40539769444975 22.773733986941973 24.6086482892289 39 26.863503785601274 23.50703949710804 28.676961238555364 20.95249547873532 40 26.94485118142356 20.786971212453462 28.914401318535184 23.353776287587802 41 21.228369255871748 25.773212892029605 27.68122195578003 25.317195896318616 42 25.05947791477151 22.44127071705961 29.791066876990946 22.708184491177935 43 24.98261052045828 24.459157712558387 25.54402544640857 25.01420632057476 44 23.46318264022994 21.010263919246793 29.756170023130956 25.770383417392306 45 24.215587104197763 19.151534872095958 28.036556812313872 28.596321211392407 46 28.767976006055072 23.776546956310554 26.626063705621462 20.829413332012912 47 21.05081972238138 22.943974044285994 34.70327063689116 21.301935596441464 48 22.663384476087405 24.12362917848562 27.86443043854499 25.34855590688199 49 23.290348897801735 20.226971023821818 33.74643663037865 22.736243447997794 50 24.27642080889964 20.70067223601591 29.855909004095665 25.166997950988783 51 22.278104346308833 19.95321935266336 28.434333788407173 29.334342512620637 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 204.0 1 537.5 2 871.0 3 2702.5 4 4534.0 5 2998.5 6 1463.0 7 1427.0 8 1391.0 9 1339.5 10 1288.0 11 1240.0 12 1192.0 13 1249.0 14 1306.0 15 1209.0 16 1112.0 17 1050.5 18 989.0 19 964.0 20 939.0 21 1016.5 22 1094.0 23 1273.5 24 1453.0 25 1945.5 26 2655.5 27 2873.0 28 3578.0 29 4283.0 30 4756.0 31 5229.0 32 6003.5 33 6778.0 34 7207.5 35 7637.0 36 8308.5 37 8980.0 38 9352.0 39 9724.0 40 11420.0 41 13116.0 42 14317.5 43 15519.0 44 17440.0 45 19361.0 46 21302.5 47 23244.0 48 46629.5 49 70015.0 50 55839.0 51 41663.0 52 41107.0 53 40551.0 54 34836.5 55 29122.0 56 26514.5 57 23907.0 58 21263.5 59 18620.0 60 17401.5 61 16183.0 62 14831.5 63 13480.0 64 12231.5 65 10983.0 66 9099.5 67 7216.0 68 6364.5 69 5513.0 70 4702.0 71 3891.0 72 3205.5 73 2520.0 74 2079.5 75 1234.5 76 830.0 77 650.0 78 470.0 79 381.0 80 292.0 81 209.0 82 126.0 83 89.0 84 52.0 85 29.5 86 7.0 87 8.0 88 9.0 89 4.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 424107.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.982948783255598 #Duplication Level Percentage of deduplicated Percentage of total 1 73.0643118272551 23.368121430549163 2 8.62576391942297 5.517547313027178 3 3.3404189628259964 3.2050934580803894 4 2.050099338511836 2.6227288857684083 5 1.4904040772148055 2.3833758633958224 6 1.19491726922288 2.293018669306981 7 1.0834828382217638 2.4257083285668157 8 0.9692455887885352 2.479946561969611 9 0.8752469455682114 2.51936804095281 >10 7.173795502636962 36.579715781681166 >50 0.07317910225006923 1.6399933227965857 >100 0.047307702464691216 3.041446460685898 >500 0.002956731404043201 0.5023765043884596 >1k 0.006652645659097202 4.306489601854203 >5k 7.391828510108003E-4 2.085630833748231 >10k+ 0.0014783657020216005 5.029438943228278 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCG 10639 2.5085650555166503 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGC 10635 2.507621897304218 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTC 8822 2.080135437519305 No Hit GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 3556 0.8384676508522614 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2857 0.6736507532297275 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGGGTGAT 2341 0.5519833438259685 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCT 2227 0.5251033347716496 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGGGTGATCGTA 1644 0.38763802530965064 No Hit GAACTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCT 1579 0.3723117043576267 No Hit CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1529 0.3605222267022237 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTC 1337 0.3152506325054762 No Hit CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 1146 0.27021482786183676 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATCGAATGC 568 0.1339284661653781 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATG 527 0.12426109448794762 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTT 517 0.12190319895686702 No Hit TCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 513 0.12096004074443477 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCC 497 0.11718740789470582 No Hit CGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG 457 0.10775582577038341 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCGGGTGA 431 0.10162529738957386 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.7157910621612E-4 0.0 0.0 0.2801179890923753 0.0 2 4.7157910621612E-4 0.0 0.0 1.717491104839109 0.0 3 7.0736865932418E-4 0.0 0.0 2.1782238916122583 0.0 4 7.0736865932418E-4 0.0 0.0 3.0152768051458714 0.0 5 7.0736865932418E-4 0.0 0.0 6.282376853011151 0.0 6 7.0736865932418E-4 0.0 0.0 7.091135020171796 0.0 7 7.0736865932418E-4 0.0 0.0 8.318655433652356 0.0 8 7.0736865932418E-4 0.0 0.0 9.588853756245475 0.0 9 7.0736865932418E-4 0.0 0.0 9.982858099489045 0.0 10 7.0736865932418E-4 0.0 0.0 13.348282391000385 0.0 11 7.0736865932418E-4 0.0 0.0 14.607634394150534 0.0 12 7.0736865932418E-4 0.0 0.0 18.246338777714115 0.0 13 7.0736865932418E-4 0.0 0.0 18.823315814169536 0.0 14 7.0736865932418E-4 0.0 0.0 19.086456955438134 0.0 15 7.0736865932418E-4 0.0 0.0 19.787459296828395 0.0 16 7.0736865932418E-4 0.0 0.0 20.45875215452704 0.0 17 7.0736865932418E-4 0.0 0.0 21.202196615476755 0.0 18 7.0736865932418E-4 0.0 0.0 21.956487395869438 0.0 19 7.0736865932418E-4 0.0 0.0 23.046306710334893 0.0 20 7.0736865932418E-4 0.0 0.0 23.61314479600667 0.0 21 7.0736865932418E-4 0.0 0.0 24.130231285972645 0.0 22 7.0736865932418E-4 0.0 0.0 24.759553603218055 0.0 23 7.0736865932418E-4 0.0 0.0 25.267680090165925 0.0 24 7.0736865932418E-4 0.0 0.0 25.717330767942997 0.0 25 7.0736865932418E-4 0.0 0.0 26.088463524535083 0.0 26 7.0736865932418E-4 0.0 0.0 26.45488049006501 0.0 27 7.0736865932418E-4 0.0 0.0 26.90311643052343 0.0 28 7.0736865932418E-4 0.0 0.0 27.258687076610382 0.0 29 7.0736865932418E-4 0.0 0.0 27.621802988396794 0.0 30 7.0736865932418E-4 0.0 0.0 28.029247336167522 0.0 31 7.0736865932418E-4 0.0 0.0 28.393542195719476 0.0 32 7.0736865932418E-4 0.0 0.0 28.753592843315484 0.0 33 7.0736865932418E-4 0.0 0.0 29.10774875208379 0.0 34 7.0736865932418E-4 0.0 0.0 29.460725713086557 0.0 35 7.0736865932418E-4 0.0 0.0 29.81370267408932 0.0 36 7.0736865932418E-4 0.0 0.0 30.157012263414657 0.0 37 7.0736865932418E-4 0.0 0.0 30.513290278160937 0.0 38 7.0736865932418E-4 0.0 0.0 30.855656709273838 0.0 39 7.0736865932418E-4 0.0 0.0 31.193778928430795 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATCG 30 2.162251E-6 45.000004 20 ATAGCGG 35 1.2095006E-7 45.000004 2 AATGCGG 30 2.162251E-6 45.000004 2 CACTAGG 30 2.162251E-6 45.000004 2 CGAGACA 30 2.162251E-6 45.000004 22 ATAACGC 30 2.162251E-6 45.000004 11 CGCCGAT 75 0.0 45.000004 38 GTCGATA 20 7.028248E-4 45.0 19 ATTAGCG 20 7.028248E-4 45.0 1 TTTCGAG 25 3.886629E-5 45.0 1 TTTCGAC 20 7.028248E-4 45.0 24 CGCATCG 20 7.028248E-4 45.0 21 TCGATTA 20 7.028248E-4 45.0 41 TAACGCC 20 7.028248E-4 45.0 12 CTAACGG 25 3.886629E-5 45.0 2 GTCGTTT 25 3.886629E-5 45.0 9 CATACGG 20 7.028248E-4 45.0 2 CGTAAGC 20 7.028248E-4 45.0 43 CCGGTGT 20 7.028248E-4 45.0 33 TTGCCCG 20 7.028248E-4 45.0 24 >>END_MODULE