SRR3551499_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551499_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	464449
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG	5397	1.1620220949985898	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC	5335	1.1486729436385912	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC	5144	1.1075489450940792	No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	2671	0.5750900529444568	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2046	0.4405219948799545	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT	1246	0.2682748805573917	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	1072	0.23081113319223423	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTTACCTT	944	0.2032515949006242	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT	926	0.19937603482836652	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	870	0.18731873682578712	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	833	0.17935230778836858	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTA	799	0.17203180542965968	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC	762	0.16406537639224114	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	671	0.1444722671380496	No Hit
TCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	612	0.1317690424567606	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCC	523	0.11260655098837546	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACACGT	20	7.028939E-4	45.000004	10
TAGCCGT	20	7.028939E-4	45.000004	44
GTATGCG	40	6.7993824E-9	45.000004	1
TAGTACG	20	7.028939E-4	45.000004	1
TATCCTC	20	7.028939E-4	45.000004	42
CCATTCG	20	7.028939E-4	45.000004	35
TCGATTA	25	3.8872036E-5	45.0	41
ATCGCAT	25	3.8872036E-5	45.0	10
TACGGCT	725	0.0	41.89655	7
CGTTTTT	1055	0.0	41.587677	1
ACGGCTG	750	0.0	40.499996	8
CATCGAA	45	1.924127E-8	40.000004	42
TGAATGA	495	0.0	40.0	22
GTTACCG	40	3.4522964E-7	39.375004	38
ATGAATG	510	0.0	39.264706	21
GAATGAC	155	0.0	39.193546	1
CGAATAT	115	0.0	39.130436	14
CGTATGG	70	0.0	38.57143	2
GGATCGA	35	6.2402487E-6	38.57143	8
GATGAAT	520	0.0	38.509613	20