##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551498_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 648708 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33576431923146 33.0 31.0 34.0 30.0 34.0 2 32.473911220456664 34.0 31.0 34.0 31.0 34.0 3 32.4853817125733 34.0 31.0 34.0 31.0 34.0 4 36.01198073709589 37.0 35.0 37.0 35.0 37.0 5 36.06477644795501 37.0 35.0 37.0 35.0 37.0 6 36.0742922855892 37.0 35.0 37.0 35.0 37.0 7 36.1627326932919 37.0 36.0 37.0 35.0 37.0 8 36.02989018171504 37.0 36.0 37.0 35.0 37.0 9 37.888096030879844 39.0 38.0 39.0 35.0 39.0 10 37.68136665495107 39.0 37.0 39.0 35.0 39.0 11 37.6148328677926 39.0 37.0 39.0 35.0 39.0 12 37.475082779925636 39.0 37.0 39.0 35.0 39.0 13 37.387715274052425 39.0 37.0 39.0 35.0 39.0 14 38.66643235477287 40.0 38.0 41.0 35.0 41.0 15 38.70106889386288 40.0 38.0 41.0 35.0 41.0 16 38.78447776195145 40.0 38.0 41.0 35.0 41.0 17 38.70446795784852 40.0 38.0 41.0 35.0 41.0 18 38.63207791487079 40.0 38.0 41.0 35.0 41.0 19 38.52951713251571 40.0 37.0 41.0 35.0 41.0 20 38.32830641829606 40.0 37.0 41.0 34.0 41.0 21 38.26873261929867 40.0 37.0 41.0 34.0 41.0 22 38.2532865326156 40.0 37.0 41.0 34.0 41.0 23 38.17050352392756 40.0 36.0 41.0 34.0 41.0 24 38.113482491352045 40.0 36.0 41.0 34.0 41.0 25 38.04178613490199 40.0 36.0 41.0 34.0 41.0 26 38.00904413079537 40.0 36.0 41.0 34.0 41.0 27 37.9716482608508 40.0 36.0 41.0 34.0 41.0 28 37.88821318682674 40.0 36.0 41.0 34.0 41.0 29 37.83407326562953 40.0 35.0 41.0 34.0 41.0 30 37.695363707554094 40.0 35.0 41.0 33.0 41.0 31 37.65729573244048 40.0 35.0 41.0 33.0 41.0 32 37.41051443792893 40.0 35.0 41.0 33.0 41.0 33 37.25351159535569 40.0 35.0 41.0 33.0 41.0 34 37.058471608181186 40.0 35.0 41.0 32.0 41.0 35 36.926853067944286 40.0 35.0 41.0 32.0 41.0 36 36.80792282506151 40.0 35.0 41.0 31.0 41.0 37 36.705940114812826 40.0 35.0 41.0 31.0 41.0 38 36.612742559055846 39.0 35.0 41.0 31.0 41.0 39 36.54791369922985 39.0 35.0 41.0 31.0 41.0 40 36.49742102764264 39.0 35.0 41.0 31.0 41.0 41 36.4079477977765 39.0 35.0 41.0 30.0 41.0 42 36.28528243832356 39.0 35.0 41.0 30.0 41.0 43 36.2050984418259 39.0 35.0 41.0 30.0 41.0 44 36.21228195120146 39.0 35.0 41.0 30.0 41.0 45 36.10352731891699 39.0 35.0 41.0 30.0 41.0 46 36.04738341441758 39.0 35.0 41.0 30.0 41.0 47 35.95426601799269 38.0 35.0 41.0 30.0 41.0 48 35.90015076120535 38.0 35.0 41.0 30.0 41.0 49 35.85390653421879 38.0 35.0 41.0 30.0 41.0 50 35.77462433020712 38.0 35.0 41.0 30.0 41.0 51 34.991772877781685 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 15.0 10 14.0 11 15.0 12 17.0 13 23.0 14 21.0 15 35.0 16 55.0 17 92.0 18 163.0 19 299.0 20 582.0 21 1110.0 22 1826.0 23 2603.0 24 3627.0 25 4813.0 26 6459.0 27 7540.0 28 7658.0 29 7563.0 30 8102.0 31 9957.0 32 12664.0 33 18005.0 34 36364.0 35 50477.0 36 45006.0 37 66515.0 38 119077.0 39 237733.0 40 272.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.537603975902876 18.376989338808833 21.84742596052461 15.237980724763684 2 32.90586827971907 26.725583775751183 23.1893240101864 17.17922393434334 3 30.9834316826677 25.445655055895717 26.631396560548044 16.939516700888536 4 28.343723215992405 23.49824574384777 29.808635009896594 18.349396030263232 5 27.391522842326594 27.409096234361225 25.2904234262565 19.908957497055685 6 25.31061741184015 34.97706209881796 25.05056204023998 14.661758449101908 7 73.39157217114634 6.7327672851267435 14.839188047626974 5.0364724960999405 8 73.81055883386671 9.088372580575543 11.778180629805707 5.322887955752049 9 67.70534662745025 7.968300067210516 13.820239614741917 10.50611369059731 10 41.033716248296614 23.004803393822797 19.97308496272591 15.988395395154676 11 32.277850743323654 23.346867928251232 25.11253137004631 19.26274995837881 12 27.450563273460478 20.855916683623448 30.273559136005723 21.41996090691035 13 26.307059570715946 21.668917294067594 32.82015945540983 19.20386367980663 14 21.757555017049274 26.0537869118309 30.45438009088835 21.734277980231475 15 20.526184354131598 22.701276999821182 34.33393761137523 22.438601034671997 16 23.463561417463634 22.951312454910376 30.065299025139197 23.51982710248679 17 24.13304599295831 23.69509856514796 29.191870610505806 22.979984831387927 18 24.73347022080813 22.4217984054459 29.419399791585736 23.425331582160233 19 25.061506872121203 24.071384968275403 27.64263736534774 23.22447079425566 20 26.8509098084192 24.281957367567532 28.854584805490298 20.01254801852297 21 25.222287993981883 26.07305598204431 28.675305376224742 20.029350647749062 22 23.577788465688723 22.42981433865468 29.853339252791706 24.139057942864895 23 23.924477576968375 24.842610234496874 29.309026557403328 21.92388563113142 24 23.86543714583449 23.932339357615444 28.931969391467348 23.270254105082717 25 23.54402905467483 26.003995634399452 27.640325076922128 22.81165023400359 26 22.00296589528725 23.658872713146746 30.029843935946527 24.308317455619477 27 24.777249548332993 23.52028956017191 28.76872182861935 22.933739062875745 28 21.406703786603526 25.172959174235558 30.168118783797947 23.252218255362965 29 23.108393915290083 24.150311079869525 29.53131455138521 23.209980453455177 30 22.60770639486487 25.09310814727119 29.768709496414413 22.53047596144953 31 24.39125153381799 23.414386750279014 26.725737928312892 25.4686237875901 32 24.68707029973424 25.887456297748756 26.693982500601194 22.73149090191581 33 24.46817366210992 23.78681933936378 25.975014952798485 25.769992045727818 34 22.361678906380067 23.92062376292569 28.20113209641318 25.516565234281064 35 23.110552051153984 23.809942223619874 27.87463697071718 25.204868754508965 36 23.63050864179261 25.866491549356567 26.461212132423217 24.041787676427607 37 22.480992989141495 26.599641132836343 27.055470257804743 23.863895620217416 38 22.63314156754657 26.036675977481394 24.97471897988001 26.355463475092026 39 24.16588048860196 25.177892056210187 25.37150767371452 25.28471978147333 40 23.336077248931723 22.6591933504751 27.915024941884486 26.089704458708695 41 22.27566177694741 23.75938018337989 26.55185383870709 27.41310420096561 42 22.273811946206923 23.778032643346467 28.30163956664632 25.646515843800294 43 23.78126984714232 23.111168661400818 28.01584071724104 25.091720774215826 44 23.084191963102043 22.741048360741658 28.844102431294203 25.330657244862092 45 22.612330971716087 22.81550404804627 27.417882930378536 27.154282049859102 46 23.4543122637612 24.58039672703281 27.07196458190742 24.893326427298568 47 21.54266634602934 24.125492517434655 30.394877202069342 23.93696393446666 48 21.814437312319257 24.473260696646257 28.34696041978826 25.36534157124623 49 22.299092966326914 23.356271234515376 30.026606732150675 24.318029067007036 50 22.12551718184453 22.969810762315248 29.08673856342145 25.817933492418778 51 21.436917688698152 23.18670341663738 27.756864413572824 27.619514481091645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 288.0 1 783.0 2 1278.0 3 5891.0 4 10504.0 5 6729.0 6 2954.0 7 2862.0 8 2770.0 9 2740.5 10 2711.0 11 2660.5 12 2610.0 13 2524.0 14 2438.0 15 2343.5 16 2249.0 17 2226.0 18 2203.0 19 2152.0 20 2101.0 21 2261.0 22 2421.0 23 2452.5 24 2484.0 25 3023.5 26 4085.5 27 4608.0 28 5664.5 29 6721.0 30 7539.5 31 8358.0 32 9221.0 33 10084.0 34 10961.5 35 11839.0 36 13048.0 37 14257.0 38 15594.5 39 16932.0 40 18636.5 41 20341.0 42 22348.5 43 24356.0 44 27108.5 45 29861.0 46 32989.5 47 36118.0 48 49248.5 49 62379.0 50 58442.5 51 54506.0 52 54491.0 53 54476.0 54 49440.5 55 44405.0 56 42133.0 57 39861.0 58 37677.5 59 35494.0 60 33979.0 61 32464.0 62 30100.0 63 27736.0 64 25597.5 65 23459.0 66 19690.5 67 15922.0 68 13837.5 69 11753.0 70 9973.0 71 8193.0 72 6947.5 73 5702.0 74 4675.0 75 2950.0 76 2252.0 77 1715.5 78 1179.0 79 920.0 80 661.0 81 518.0 82 375.0 83 256.0 84 137.0 85 91.0 86 45.0 87 25.0 88 5.0 89 4.5 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 648708.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.569163505285687 #Duplication Level Percentage of deduplicated Percentage of total 1 72.1510306625093 22.77747684059637 2 8.299432503444617 5.240122834046513 3 3.2849013209316014 3.1110476069765594 4 2.017593837998798 2.547749990361638 5 1.4747532802154415 2.3278363716538837 6 1.2553888624649558 2.377894575712248 7 1.1018852494652307 2.4349916923101262 8 0.984883517795178 2.4873559045549536 9 0.8890555638477271 2.526006641435357 >10 8.42778375638943 45.69843840562327 >50 0.06375709022508505 1.4090854316897878 >100 0.04070644991236904 2.2663655146532906 >500 0.005885269866848536 1.2517806521363475 >1k 0.0024521957778535566 2.505574062278604 >5k 4.904391555707113E-4 1.0382734759711003 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6706 1.0337470788089558 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCG 4794 0.7390073808246546 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGC 4209 0.6488281322259013 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC 4191 0.6460533861151705 No Hit GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 1932 0.2978227492184465 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTCACCCGT 1057 0.16293925772458487 No Hit CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCT 967 0.14906552717093052 No Hit GAACTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT 901 0.13889145809825065 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCT 856 0.13195459282142352 No Hit CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 747 0.11515196359533103 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTCACCCGTCGTA 649 0.10004501254801852 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15353595146044138 0.0 2 0.0 0.0 0.0 0.6727217792905282 0.0 3 0.0 0.0 0.0 0.9108874871282611 0.0 4 0.0 0.0 0.0 1.317233639788626 0.0 5 0.0 0.0 0.0 2.6602107573823663 0.0 6 0.0 0.0 0.0 3.3706999142911758 0.0 7 0.0 0.0 0.0 4.025848301547075 0.0 8 0.0 0.0 0.0 4.885865443311937 0.0 9 0.0 0.0 0.0 5.292211595972302 0.0 10 0.0 0.0 0.0 6.71041516367919 0.0 11 0.0 0.0 0.0 7.596329935810873 0.0 12 0.0 0.0 0.0 8.964125615839484 0.0 13 0.0 0.0 0.0 9.312818710421329 0.0 14 1.5415256170727044E-4 0.0 0.0 9.485932037218594 0.0 15 3.083051234145409E-4 0.0 0.0 9.809498264242155 0.0 16 3.083051234145409E-4 0.0 0.0 10.274884848036404 0.0 17 3.083051234145409E-4 0.0 0.0 10.77773050432552 0.0 18 3.083051234145409E-4 0.0 0.0 11.341158117365595 0.0 19 3.083051234145409E-4 0.0 0.0 11.851094791493246 0.0 20 3.083051234145409E-4 0.0 0.0 12.231235008663374 0.0 21 3.083051234145409E-4 0.0 0.0 12.633110737034228 0.0 22 3.083051234145409E-4 0.0 0.0 13.090018929934578 0.0 23 3.083051234145409E-4 0.0 0.0 13.497289997965186 0.0 24 3.083051234145409E-4 0.0 0.0 13.82347681853777 0.0 25 3.083051234145409E-4 0.0 0.0 14.13471084062475 0.0 26 3.083051234145409E-4 0.0 0.0 14.431454521911245 0.0 27 3.083051234145409E-4 0.0 0.0 14.772748293531142 0.0 28 3.083051234145409E-4 0.0 0.0 15.087373671975682 0.0 29 3.083051234145409E-4 0.0 0.0 15.408627610573632 0.0 30 3.083051234145409E-4 0.0 0.0 15.808653508204 0.0 31 3.083051234145409E-4 0.0 0.0 16.140389820998045 0.0 32 3.083051234145409E-4 0.0 0.0 16.485845711784037 0.0 33 3.083051234145409E-4 0.0 0.0 16.827756093650763 0.0 34 4.6245768512181133E-4 0.0 0.0 17.1550219821553 0.0 35 4.6245768512181133E-4 0.0 0.0 17.490766261553734 0.0 36 4.6245768512181133E-4 0.0 0.0 17.82142350641583 0.0 37 4.6245768512181133E-4 0.0 0.0 18.165029566461335 0.0 38 4.6245768512181133E-4 0.0 0.0 18.52004291607318 0.0 39 6.166102468290818E-4 0.0 0.0 18.976026193603285 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATGCG 20 7.031012E-4 45.0 1 TTACGAG 20 7.031012E-4 45.0 1 TGCGTTG 25 3.88892E-5 45.0 1 TGCGTCG 20 7.031012E-4 45.0 1 CGATCAC 75 0.0 42.0 34 CGATGAA 620 0.0 41.37097 19 CGTTTTT 2850 0.0 40.657894 1 CAAACGA 50 1.0804797E-9 40.5 15 CGTCGAA 95 0.0 40.263157 42 ATTAGCG 40 3.4551158E-7 39.375 1 TCGATTT 40 3.4551158E-7 39.375 14 TACGAAA 80 0.0 39.375 20 ATACGAA 80 0.0 39.375 19 ACATACG 80 0.0 39.375 17 GATGAAT 710 0.0 38.661972 20 ATGAATG 715 0.0 38.39161 21 CCGTCGA 100 0.0 38.25 41 CCGATGA 645 0.0 37.67442 18 CTAGACG 30 1.1393739E-4 37.499996 17 CTCACGA 60 1.546141E-10 37.499996 24 >>END_MODULE