##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551487_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 457100 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20450010938526 33.0 31.0 34.0 30.0 34.0 2 32.29085758039816 34.0 31.0 34.0 30.0 34.0 3 32.2955370816014 34.0 31.0 34.0 30.0 34.0 4 35.88681907678845 37.0 35.0 37.0 35.0 37.0 5 35.94117479763728 37.0 35.0 37.0 35.0 37.0 6 35.93036972216145 37.0 35.0 37.0 35.0 37.0 7 36.114686064318526 37.0 35.0 37.0 35.0 37.0 8 35.87504703565959 37.0 35.0 37.0 35.0 37.0 9 37.808689564646684 39.0 38.0 39.0 35.0 39.0 10 37.45196674688252 39.0 37.0 39.0 34.0 39.0 11 37.48343032159265 39.0 37.0 39.0 35.0 39.0 12 37.425138919273685 39.0 37.0 39.0 35.0 39.0 13 37.36738131699847 39.0 37.0 39.0 34.0 39.0 14 38.67339969372129 40.0 38.0 41.0 35.0 41.0 15 38.638031065412385 40.0 38.0 41.0 34.0 41.0 16 38.744095383942245 40.0 38.0 41.0 35.0 41.0 17 38.62391599212426 40.0 38.0 41.0 34.0 41.0 18 38.49164077882301 40.0 38.0 41.0 34.0 41.0 19 38.3511551082914 40.0 37.0 41.0 34.0 41.0 20 38.070319404944215 40.0 36.0 41.0 34.0 41.0 21 38.13275213301247 40.0 36.0 41.0 34.0 41.0 22 38.14725224239773 40.0 36.0 41.0 34.0 41.0 23 38.04709035222052 40.0 36.0 41.0 34.0 41.0 24 38.00811201050099 40.0 36.0 41.0 34.0 41.0 25 37.9405797418508 40.0 36.0 41.0 34.0 41.0 26 37.91651061036972 40.0 36.0 41.0 34.0 41.0 27 37.84654123824109 40.0 36.0 41.0 34.0 41.0 28 37.79577772916211 40.0 36.0 41.0 33.0 41.0 29 37.69296434040691 40.0 36.0 41.0 33.0 41.0 30 37.56767884489171 40.0 36.0 41.0 33.0 41.0 31 37.48303653467513 40.0 36.0 41.0 33.0 41.0 32 37.18430759133669 40.0 35.0 41.0 32.0 41.0 33 36.91997155983373 40.0 35.0 41.0 31.0 41.0 34 36.70048129512142 40.0 35.0 41.0 31.0 41.0 35 36.5090089695909 40.0 35.0 41.0 30.0 41.0 36 36.479085539269306 40.0 35.0 41.0 30.0 41.0 37 36.37843579085539 40.0 35.0 41.0 30.0 41.0 38 36.27215926493109 40.0 35.0 41.0 29.0 41.0 39 36.2550426602494 40.0 35.0 41.0 29.0 41.0 40 36.15577772916211 39.0 35.0 41.0 29.0 41.0 41 36.11705316123387 39.0 35.0 41.0 28.0 41.0 42 35.95259243054036 39.0 35.0 41.0 27.0 41.0 43 35.86183767228177 39.0 35.0 41.0 27.0 41.0 44 35.972638372347404 39.0 35.0 41.0 28.0 41.0 45 35.957114416976594 39.0 35.0 41.0 28.0 41.0 46 35.908750820389415 39.0 35.0 41.0 28.0 41.0 47 35.82637278494859 39.0 35.0 41.0 28.0 41.0 48 35.79680157514767 39.0 35.0 41.0 28.0 41.0 49 35.79759571209801 39.0 35.0 41.0 28.0 41.0 50 35.66535331437322 39.0 35.0 41.0 27.0 41.0 51 34.88374097571647 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 4.0 11 7.0 12 7.0 13 6.0 14 11.0 15 16.0 16 23.0 17 57.0 18 127.0 19 259.0 20 613.0 21 1307.0 22 1944.0 23 2448.0 24 3004.0 25 4431.0 26 6166.0 27 7046.0 28 6565.0 29 6015.0 30 6210.0 31 7449.0 32 9212.0 33 12443.0 34 21724.0 35 31326.0 36 30729.0 37 42844.0 38 83325.0 39 171567.0 40 207.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.65696784073507 17.774447604462917 21.897615401443886 14.670969153358126 2 33.777510391599215 28.846860643185295 22.30824764821702 15.067381316998468 3 28.752789323999124 28.79960621308248 28.246773134981407 14.200831327936994 4 24.777072850579742 22.03019033034347 36.22467731349814 16.968059505578648 5 28.07481951432947 25.948807700721943 27.448260774447604 18.528112010500987 6 21.979654342594618 37.706628746444984 27.297965434259464 13.01575147670094 7 70.92430540363159 5.057974185079852 19.808575803981622 4.209144607306935 8 70.70947276307153 10.655873988186393 13.894990155327061 4.7396630934150075 9 65.81820170640998 6.15226427477576 14.784948588930213 13.24458542988405 10 35.70444104134763 21.77357252242398 24.42660249398381 18.095383942244585 11 30.011813607525706 23.27849485889302 27.164734193830668 19.544957339750603 12 25.37366003062787 19.308028877707283 32.48873331874863 22.82957777291621 13 24.792824327280684 20.490921023845985 35.730912273025595 18.985342375847736 14 20.180704441041346 28.045723036534675 30.2988405162984 21.474732006125574 15 17.8133887551958 23.000218770509736 38.105009844672935 21.081382629621526 16 19.387442572741197 22.901772041128858 32.69940931962371 25.011376066506237 17 20.29337125355502 24.043097790417853 33.15488952089258 22.508641435134543 18 20.21964559177423 23.55217676657187 32.733756289652156 23.49442135200175 19 21.598993655655217 24.961277619776855 30.36009625902428 23.079632465543646 20 23.658936775322687 24.162327718223583 32.88120761321374 19.29752789323999 21 21.251804856705316 28.737037847298186 30.49748413913804 19.513673156858456 22 19.138044191642965 22.908772697440387 32.52679938744257 25.42638372347408 23 20.984467293808795 27.32378035440823 31.197768540800702 20.49398381098228 24 21.191642966528114 24.87158171078539 30.427477576022753 23.509297746663748 25 19.78779260555677 29.507547582585868 29.025158608619556 21.679501203237802 26 18.88339531831109 25.255305184861083 32.600743819733104 23.260555677094725 27 22.887551957996063 25.775978998031064 29.96149639028659 21.37497265368628 28 18.18136075257055 26.68300153139357 33.6751257930431 21.46051192299278 29 21.687376941588273 25.85976810325968 30.986873769415883 21.46598118573616 30 19.49398381098228 30.11922992780573 30.817545394880767 19.56924086633122 31 21.375410194705754 25.16385911179173 28.57755414570116 24.883176547801355 32 24.78276088383286 28.62393349376504 26.778385473638156 19.814920148763946 33 22.117698534237583 26.751476700940714 26.884489170859766 24.246335593961934 34 21.53664406038066 26.744257274119448 27.78954276963465 23.92955589586524 35 21.368409538394225 28.5405819295559 26.37475388317655 23.71625464887333 36 21.557208488295778 29.662218332968713 27.883395318311095 20.897177860424414 37 22.021658280463793 27.45219864362284 29.230584117260992 21.295558958652375 38 20.732881207613215 28.473200612557427 27.633778166703127 23.16014001312623 39 24.516079632465544 24.933493765040474 26.938744257274124 23.611682345219865 40 20.09188361408882 28.56530299715598 29.13935681470138 22.203456574053817 41 21.08444541675782 26.81929555895865 27.21133231240429 24.88492671187924 42 21.070662874644498 27.659374316342156 29.757821045723038 21.51214176329031 43 23.817107853861298 25.695252679938747 27.43032159264931 23.057317873550645 44 22.57930430977904 24.493108728943337 29.619776854080072 23.30781010719755 45 21.001093852548678 23.714504484795448 29.03172172391162 26.252679938744254 46 24.090570991030408 27.060599431196675 27.339969372128635 21.50886020564428 47 19.37978560490046 26.37737912929337 32.797637278494854 21.44519798731131 48 21.36819076788449 25.993436884707943 28.35331437322249 24.28505797418508 49 20.8208269525268 23.903522205206738 32.42988405162984 22.845766790636624 50 21.458980529424636 22.925618026690003 30.646904397287244 24.968497046598117 51 20.80179391817983 23.46707503828484 28.432071756727197 27.299059286808138 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 240.0 1 567.0 2 894.0 3 5587.0 4 10280.0 5 6553.5 6 2827.0 7 2755.5 8 2684.0 9 2748.0 10 2812.0 11 2699.0 12 2586.0 13 2504.5 14 2423.0 15 2306.5 16 2190.0 17 2134.0 18 2078.0 19 1974.5 20 1871.0 21 1810.0 22 1749.0 23 1767.0 24 1785.0 25 2205.5 26 3045.5 27 3465.0 28 4152.5 29 4840.0 30 5142.0 31 5444.0 32 6360.5 33 7277.0 34 8485.0 35 9693.0 36 10468.0 37 11243.0 38 12716.0 39 14189.0 40 16112.0 41 18035.0 42 20637.0 43 23239.0 44 40244.5 45 57250.0 46 49355.0 47 41460.0 48 42271.5 49 43083.0 50 37937.5 51 32792.0 52 30631.0 53 28470.0 54 25489.5 55 22509.0 56 21498.5 57 20488.0 58 19518.5 59 18549.0 60 17542.0 61 16535.0 62 14786.5 63 13038.0 64 11502.5 65 9967.0 66 8112.0 67 6257.0 68 5194.0 69 4131.0 70 3486.0 71 2841.0 72 2459.5 73 2078.0 74 1707.5 75 1093.5 76 850.0 77 622.0 78 394.0 79 374.0 80 354.0 81 247.5 82 141.0 83 88.5 84 36.0 85 34.5 86 33.0 87 18.0 88 3.0 89 13.0 90 23.0 91 13.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 457100.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.172689981046304 #Duplication Level Percentage of deduplicated Percentage of total 1 73.59771325250394 25.886295515442647 2 8.864912364423619 6.2360562860603235 3 3.4489763223057595 3.639293248092892 4 2.0802057895151034 2.926657333255696 5 1.4943097245831565 2.6279446339213033 6 1.207148075265697 2.547518700752226 7 1.0773395302088127 2.652505051025245 8 0.8895437057999537 2.5030115990954265 9 0.8239282468461445 2.6081795513651795 >10 6.421021206283505 36.417183570944694 >50 0.05619184476178529 1.4210447830586665 >100 0.030593337703638663 2.1343122000536514 >500 0.00187306149205951 0.4284435746789458 >1k 0.00374612298411902 1.9309607135581601 >5k 0.0024974153227460133 6.040593238694907 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG 7857 1.7188798949901556 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC 6897 1.508860205644279 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6685 1.4624808575803983 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 6068 1.3274994530737256 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 2213 0.4841391380441916 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCT 1600 0.3500328155764603 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGACAGT 1466 0.32071756727193174 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTA 1243 0.27193174360096256 No Hit GAACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCT 1183 0.25880551301684535 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTC 1088 0.23802231459199302 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCC 840 0.18376722817764166 No Hit CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 597 0.13060599431196673 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 514 0.11244804200393786 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1349814045066725 0.0 2 0.0 0.0 0.0 0.8987092539925619 0.0 3 0.0 0.0 0.0 1.1739225552395538 0.0 4 0.0 0.0 0.0 1.796105884926712 0.0 5 0.0 0.0 0.0 4.090570991030409 0.0 6 0.0 0.0 0.0 4.82126449354627 0.0 7 0.0 0.0 0.0 5.770509735287683 0.0 8 0.0 0.0 0.0 6.922336469043973 0.0 9 0.0 0.0 0.0 7.332312404287902 0.0 10 2.187705097352877E-4 0.0 0.0 9.984467293808795 0.0 11 2.187705097352877E-4 0.0 0.0 11.237366003062787 0.0 12 2.187705097352877E-4 0.0 0.0 13.707285057974184 0.0 13 2.187705097352877E-4 0.0 0.0 14.164077882301466 0.0 14 2.187705097352877E-4 0.0 0.0 14.380004375410195 0.0 15 2.187705097352877E-4 0.0 0.0 14.939838109822796 0.0 16 2.187705097352877E-4 0.0 0.0 15.622183329687159 0.0 17 2.187705097352877E-4 0.0 0.0 16.37497265368628 0.0 18 2.187705097352877E-4 0.0 0.0 17.166703128418288 0.0 19 2.187705097352877E-4 0.0 0.0 17.95405819295559 0.0 20 4.375410194705754E-4 0.0 0.0 18.47407569459637 0.0 21 4.375410194705754E-4 0.0 0.0 19.04134762633997 0.0 22 4.375410194705754E-4 0.0 0.0 19.66900021877051 0.0 23 4.375410194705754E-4 0.0 0.0 20.25618026690002 0.0 24 4.375410194705754E-4 0.0 0.0 20.690658499234303 0.0 25 4.375410194705754E-4 0.0 0.0 21.105666156202144 0.0 26 4.375410194705754E-4 0.0 0.0 21.489608400787574 0.0 27 4.375410194705754E-4 0.0 0.0 21.906803762852768 0.0 28 4.375410194705754E-4 0.0 0.0 22.304309779041784 0.0 29 4.375410194705754E-4 0.0 0.0 22.686939400568804 0.0 30 4.375410194705754E-4 0.0 0.0 23.133887551957997 0.0 31 4.375410194705754E-4 0.0 0.0 23.551957996062132 0.0 32 4.375410194705754E-4 0.0 0.0 23.963027783854738 0.0 33 4.375410194705754E-4 0.0 0.0 24.367096915335814 0.0 34 4.375410194705754E-4 0.0 0.0 24.77947932618683 0.0 35 6.563115292058631E-4 0.0 0.0 25.2089258367972 0.0 36 6.563115292058631E-4 0.0 0.0 25.613870050317217 0.0 37 6.563115292058631E-4 0.0 0.0 26.01750164077882 0.0 38 6.563115292058631E-4 0.0 0.0 26.408007000656312 0.0 39 6.563115292058631E-4 0.0 0.0 26.785823670969155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGCG 55 1.8189894E-12 45.0 36 CGTATGG 20 7.028824E-4 45.0 2 CGACGGT 25 3.887106E-5 45.0 28 CCGCTCG 25 3.887106E-5 45.0 19 GGTATCG 20 7.028824E-4 45.0 1 ACAGACG 20 7.028824E-4 45.0 43 TATACGG 25 3.887106E-5 45.0 2 ACGGTCG 20 7.028824E-4 45.0 40 ACCGAAG 30 2.162622E-6 44.999996 17 CTACGAA 30 2.162622E-6 44.999996 11 CGAATAT 30 2.162622E-6 44.999996 14 CGTAAGC 30 2.162622E-6 44.999996 43 GATTGCG 30 2.162622E-6 44.999996 1 TATAGCG 30 2.162622E-6 44.999996 1 TAGTATG 30 2.162622E-6 44.999996 1 CGTTTTT 3120 0.0 43.701923 1 CGATGAA 720 0.0 41.875 19 CAGTCGA 65 0.0 41.53846 41 CGGCGAT 60 3.6379788E-12 41.249996 31 CCGATGA 705 0.0 40.851063 18 >>END_MODULE