##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551475_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 367027 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.212962534091496 33.0 31.0 34.0 30.0 34.0 2 32.30111136237934 34.0 31.0 34.0 30.0 34.0 3 32.31554081852289 34.0 31.0 34.0 30.0 34.0 4 35.88906810670605 37.0 35.0 37.0 35.0 37.0 5 35.96021273639269 37.0 35.0 37.0 35.0 37.0 6 35.9479438842374 37.0 35.0 37.0 35.0 37.0 7 36.133507889065385 37.0 35.0 37.0 35.0 37.0 8 35.92941118773278 37.0 35.0 37.0 35.0 37.0 9 37.828887248077116 39.0 38.0 39.0 35.0 39.0 10 37.52189076008032 39.0 37.0 39.0 35.0 39.0 11 37.53447021608765 39.0 37.0 39.0 35.0 39.0 12 37.474087737414415 39.0 37.0 39.0 35.0 39.0 13 37.440310930803456 39.0 37.0 39.0 35.0 39.0 14 38.682402112106196 40.0 38.0 41.0 35.0 41.0 15 38.73437104082261 40.0 38.0 41.0 35.0 41.0 16 38.7491492451509 40.0 38.0 41.0 35.0 41.0 17 38.70715778403224 40.0 38.0 41.0 35.0 41.0 18 38.6364163944342 40.0 38.0 41.0 35.0 41.0 19 38.55981440057543 40.0 38.0 41.0 35.0 41.0 20 38.48854716410509 40.0 38.0 41.0 34.0 41.0 21 38.38055783361987 40.0 37.0 41.0 34.0 41.0 22 38.42275091478284 40.0 37.0 41.0 34.0 41.0 23 38.37839450503641 40.0 37.0 41.0 34.0 41.0 24 38.292885809490855 40.0 37.0 41.0 34.0 41.0 25 38.106534396652016 40.0 37.0 41.0 34.0 41.0 26 38.145005680780976 40.0 37.0 41.0 34.0 41.0 27 38.1209910987475 40.0 37.0 41.0 34.0 41.0 28 38.05777776566847 40.0 37.0 41.0 34.0 41.0 29 38.03140913338801 40.0 37.0 41.0 34.0 41.0 30 37.85914115310318 40.0 36.0 41.0 33.0 41.0 31 37.82811346304223 40.0 36.0 41.0 33.0 41.0 32 37.72901993586303 40.0 36.0 41.0 33.0 41.0 33 37.630296953630115 40.0 36.0 41.0 33.0 41.0 34 37.520623823315454 40.0 36.0 41.0 33.0 41.0 35 37.41579502325442 40.0 36.0 41.0 33.0 41.0 36 37.32206349941558 40.0 35.0 41.0 33.0 41.0 37 37.278750609628176 40.0 35.0 41.0 33.0 41.0 38 37.17497622790694 40.0 35.0 41.0 32.0 41.0 39 37.157369893768035 40.0 35.0 41.0 32.0 41.0 40 37.05784043135791 39.0 35.0 41.0 32.0 41.0 41 36.952690129064074 39.0 35.0 41.0 32.0 41.0 42 36.82159623133993 39.0 35.0 41.0 31.0 41.0 43 36.72335277786103 39.0 35.0 41.0 31.0 41.0 44 36.75282472406662 39.0 35.0 41.0 31.0 41.0 45 36.72418377939498 39.0 35.0 41.0 31.0 41.0 46 36.62289967768039 39.0 35.0 41.0 31.0 41.0 47 36.524658948796684 39.0 35.0 41.0 31.0 41.0 48 36.45737234590371 39.0 35.0 41.0 31.0 41.0 49 36.381219910251836 39.0 35.0 41.0 31.0 41.0 50 36.24597917864353 38.0 35.0 40.0 31.0 41.0 51 35.37864789238939 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 7.0 12 7.0 13 12.0 14 13.0 15 20.0 16 31.0 17 57.0 18 81.0 19 134.0 20 211.0 21 444.0 22 624.0 23 915.0 24 1411.0 25 1959.0 26 2768.0 27 3285.0 28 3450.0 29 3834.0 30 4571.0 31 5574.0 32 7238.0 33 10052.0 34 18694.0 35 27821.0 36 26527.0 37 39783.0 38 73460.0 39 133878.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.56020946687846 20.2178586316538 23.11655545777286 12.105376443694878 2 34.121467902906325 25.076629239810693 23.97425802461399 16.827644832668987 3 32.40660768826272 24.68564982957657 25.959943001468556 16.947799480692154 4 29.07388284785588 25.13983984829454 26.845163979761704 18.941113324087873 5 26.528293558784505 29.0488165720778 24.260340519907256 20.16254934923044 6 25.17335236917175 35.80417789426936 23.96145242720563 15.061017309353264 7 76.72269342582426 6.889138946181071 11.491525146651336 4.896642481343334 8 75.5925313396562 8.050088958033061 10.539279126603764 5.818100575706964 9 68.43229517174485 9.608284949063693 13.214559146874752 8.744860732316697 10 37.73101161494931 25.02486193113858 20.739618611164843 16.504507842747262 11 30.285782789822 24.705539374487437 24.252166734327446 20.756511101363113 12 26.52774863974585 22.26239486468298 30.15799927525768 21.05185722031349 13 24.84067929607359 23.912409713726785 31.444825585038704 19.802085405160927 14 21.24176150528435 27.706680979873415 29.569214253992214 21.48234326085002 15 20.58567898274514 25.37987668482155 33.614965656477594 20.41947867595572 16 22.52749797698807 24.030384685595337 31.308050906336593 22.13406643108 17 22.493168077552877 24.781828039898972 28.462756146005606 24.262247736542545 18 22.796143063044408 24.048367013870912 30.24791091663556 22.907579006449115 19 24.07806510147755 25.530819258528663 28.39191667098061 21.99919896901318 20 24.773381794799835 25.794015154198462 28.501717857269355 20.93088519373234 21 24.078337560996875 26.417674993937773 28.84855882537252 20.655428619692827 22 22.050421358646638 24.62816087099859 27.722756091513705 25.59866167884107 23 21.976857288428373 26.295613129279317 28.53577529718522 23.19175428510709 24 22.903764573178538 25.6141918714427 28.70197560397464 22.78006795140412 25 22.51659959621499 26.80892686369123 27.400164020630633 23.274309519463145 26 22.308712982968558 26.591776626787677 27.72466330814899 23.374847082094778 27 23.930664501521687 26.678963672972287 27.817299544720143 21.573072280785883 28 20.847512580818307 27.043242050312376 29.428080222980867 22.68116514588845 29 23.186305094720552 26.002174226964232 27.560370217994862 23.251150460320357 30 23.682453879414865 27.57971484386707 26.711931274810848 22.025900001907218 31 24.556504017415612 28.131172910984752 24.333359671086868 22.978963400512768 32 23.918131363632646 28.69407427791416 24.749405357099068 22.638389001354124 33 23.859007647938707 28.16114345811071 24.457328752380615 23.522520141569967 34 23.855465674187457 27.019538072130935 25.23901511332954 23.885981140352072 35 23.96281472480226 27.098278873216415 24.926504044661566 24.01240235731976 36 25.079898754042617 30.17380192737864 23.57428745024208 21.172011868336664 37 22.349581910867595 30.438632580164406 25.668956234827412 21.542829274140594 38 22.33241696115 30.375966890719212 23.69880145057448 23.59281469755631 39 24.81179858702493 26.130775120086536 26.107616060943744 22.949810231944788 40 25.06300626384435 25.370068142125785 27.663904835339086 21.90302075869078 41 22.349309451348265 28.15242475349225 25.904361259525864 23.593904535633616 42 21.848256395306066 29.257248104362894 26.629648499974117 22.264847000356923 43 22.910576061161713 26.39478839431432 27.146776667656603 23.54785887686737 44 23.187394932797858 25.943322970789616 26.71002405817556 24.15925803823697 45 23.774545196947365 24.982630705642908 25.58313148623943 25.659692611170293 46 24.267424467409754 26.83780757273988 26.38988412296643 22.504883836883934 47 22.61196042797941 26.78140845223921 27.99140117757004 22.615229942211336 48 21.76243164671809 26.975944549038626 27.290907753380537 23.97071605086274 49 22.01500162113414 26.038411343034706 28.66873554261676 23.277851493214396 50 22.074670255866735 24.56277058636013 28.28674729652042 25.075811861252717 51 22.27574538113 25.024317012099928 26.179545374046054 26.52039223272402 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 211.0 1 534.0 2 857.0 3 1956.0 4 3055.0 5 2039.5 6 1024.0 7 1069.0 8 1114.0 9 1113.0 10 1112.0 11 1133.5 12 1155.0 13 1113.0 14 1071.0 15 1036.0 16 1001.0 17 997.5 18 994.0 19 1013.5 20 1033.0 21 1213.0 22 1393.0 23 1329.0 24 1265.0 25 1912.0 26 3015.5 27 3472.0 28 4132.0 29 4792.0 30 5195.0 31 5598.0 32 6254.5 33 6911.0 34 7628.5 35 8346.0 36 8699.0 37 9052.0 38 9852.5 39 10653.0 40 12428.5 41 14204.0 42 16637.5 43 19071.0 44 20387.0 45 21703.0 46 27390.5 47 33078.0 48 34795.5 49 36513.0 50 35898.0 51 35283.0 52 31536.5 53 27790.0 54 24403.5 55 21017.0 56 19339.5 57 17662.0 58 16931.0 59 16200.0 60 15057.5 61 13915.0 62 13162.0 63 12409.0 64 10900.0 65 9391.0 66 8219.5 67 7048.0 68 6004.5 69 4961.0 70 4385.5 71 3810.0 72 3192.5 73 2575.0 74 2156.5 75 1312.0 76 886.0 77 672.0 78 458.0 79 417.0 80 376.0 81 270.0 82 164.0 83 121.5 84 79.0 85 48.5 86 18.0 87 10.0 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 367027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.938459290797695 #Duplication Level Percentage of deduplicated Percentage of total 1 72.66832780248413 25.389194126574345 2 9.17868707006823 6.413783690811002 3 3.4022468738382416 3.5660779169652344 4 2.03805441494532 2.848259248359903 5 1.4179925457525915 2.477123741721576 6 1.186875440524978 2.4880559557217716 7 1.034765180293254 2.530717078904756 8 0.8846029731547689 2.47253319728692 9 0.8345613017150558 2.6242457459081954 >10 7.226515997854686 42.19512182696975 >50 0.07657852231987476 1.7975230907299793 >100 0.044540569104416956 2.9193369394252233 >500 0.003907067465299733 1.0947854790138545 >1k 0.0023442404791798395 1.1832419616074925 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1852 0.5045950297934485 No Hit GCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 1358 0.37000002724595193 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCG 1124 0.3062444997234536 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGC 964 0.26265097663114706 No Hit GAATCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTC 951 0.25910900287989713 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCC 826 0.22505156296403261 No Hit CTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCT 637 0.1735567138112455 No Hit CCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 632 0.17219441621461093 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 454 0.12369662177441987 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 374 0.1018998602282666 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1820029589103799 0.0 2 0.0 0.0 0.0 0.9339912322526681 0.0 3 0.0 0.0 0.0 1.284374174107082 0.0 4 0.0 0.0 0.0 1.8080413702534146 0.0 5 0.0 0.0 0.0 3.335449435600106 0.0 6 0.0 0.0 0.0 4.117953175107009 0.0 7 0.0 0.0 0.0 4.92443335231468 0.0 8 0.0 0.0 0.0 6.069580712045708 0.0 9 0.0 0.0 0.0 6.575265579916464 0.0 10 2.72459519326916E-4 0.0 0.0 7.930751688567871 0.0 11 2.72459519326916E-4 0.0 0.0 9.426281990153313 0.0 12 2.72459519326916E-4 0.0 0.0 10.810648807853374 0.0 13 2.72459519326916E-4 0.0 0.0 11.274647369267111 0.0 14 2.72459519326916E-4 0.0 0.0 11.483896280110182 0.0 15 2.72459519326916E-4 0.0 0.0 11.913837401608056 0.0 16 2.72459519326916E-4 0.0 0.0 12.67318208197217 0.0 17 2.72459519326916E-4 0.0 0.0 13.531429567851957 0.0 18 2.72459519326916E-4 0.0 0.0 14.46051652875674 0.0 19 2.72459519326916E-4 0.0 0.0 15.074912744838935 0.0 20 2.72459519326916E-4 0.0 0.0 15.62936786666921 0.0 21 2.72459519326916E-4 0.0 0.0 16.2821808749765 0.0 22 2.72459519326916E-4 0.0 0.0 16.94398504742158 0.0 23 2.72459519326916E-4 0.0 0.0 17.630583036125408 0.0 24 2.72459519326916E-4 0.0 0.0 18.16324139640953 0.0 25 2.72459519326916E-4 0.0 0.0 18.615796658011536 0.0 26 2.72459519326916E-4 0.0 0.0 19.060995512591717 0.0 27 2.72459519326916E-4 0.0 0.0 19.500745176785358 0.0 28 2.72459519326916E-4 0.0 0.0 19.950303383674772 0.0 29 2.72459519326916E-4 0.0 0.0 20.39277764306168 0.0 30 2.72459519326916E-4 0.0 0.0 20.893285780065227 0.0 31 5.44919038653832E-4 0.0 0.0 21.342843986954637 0.0 32 5.44919038653832E-4 0.0 0.0 21.80466287221376 0.0 33 5.44919038653832E-4 0.0 0.0 22.25531091718048 0.0 34 5.44919038653832E-4 0.0 0.0 22.710045854937103 0.0 35 5.44919038653832E-4 0.0 0.0 23.178403768660072 0.0 36 5.44919038653832E-4 0.0 0.0 23.630414111223423 0.0 37 5.44919038653832E-4 0.0 0.0 24.067711639743123 0.0 38 5.44919038653832E-4 0.0 0.0 24.489206516141863 0.0 39 5.44919038653832E-4 0.0 0.0 24.928956180335508 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.0270046E-4 45.0 1 CGGCGAA 20 7.0270046E-4 45.0 31 CGATTGT 25 3.8855993E-5 45.0 10 CAATTAG 25 3.8855993E-5 45.0 44 CGATTAT 20 7.0270046E-4 45.0 10 TTAAGCG 20 7.0270046E-4 45.0 1 GCGATAA 20 7.0270046E-4 45.0 9 GGTGATC 40 6.7939254E-9 45.0 8 CGATGAC 20 7.0270046E-4 45.0 10 CGAAGCT 20 7.0270046E-4 45.0 42 GTTAAGG 85 0.0 42.35294 2 GTAAGCG 85 0.0 42.35294 1 AGTACGG 70 0.0 41.785717 2 ACGTAGG 50 1.0768417E-9 40.5 2 GATGAAT 95 0.0 40.263157 20 CGTGCGG 45 1.9221261E-8 40.000004 2 TACGGGT 40 3.4496406E-7 39.375 4 ACGTGCG 35 6.2366707E-6 38.57143 1 CGTTTTT 870 0.0 38.53448 1 TACGAAT 65 9.094947E-12 38.076927 12 >>END_MODULE