##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551468_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 591964 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28227392206283 33.0 31.0 34.0 30.0 34.0 2 32.41836158955612 34.0 31.0 34.0 30.0 34.0 3 32.33400341912684 34.0 31.0 34.0 30.0 34.0 4 35.935810285760624 37.0 35.0 37.0 35.0 37.0 5 36.00905798325574 37.0 35.0 37.0 35.0 37.0 6 35.99888844591901 37.0 35.0 37.0 35.0 37.0 7 36.18244859484698 37.0 36.0 37.0 35.0 37.0 8 36.01103952267368 37.0 36.0 37.0 35.0 37.0 9 37.92686379577137 39.0 38.0 39.0 35.0 39.0 10 37.577317201721726 39.0 37.0 39.0 35.0 39.0 11 37.58124987330311 39.0 37.0 39.0 35.0 39.0 12 37.56045637910413 39.0 37.0 39.0 35.0 39.0 13 37.57567520997898 39.0 37.0 39.0 35.0 39.0 14 38.88720428945003 40.0 38.0 41.0 35.0 41.0 15 38.94100316911163 40.0 38.0 41.0 35.0 41.0 16 38.91356906838929 40.0 38.0 41.0 35.0 41.0 17 38.871073240940326 40.0 38.0 41.0 35.0 41.0 18 38.62643505348298 40.0 38.0 41.0 35.0 41.0 19 38.36369610314141 40.0 37.0 41.0 35.0 41.0 20 38.11110472934165 40.0 35.0 41.0 34.0 41.0 21 38.01274063963349 40.0 35.0 41.0 34.0 41.0 22 38.03146137265104 40.0 35.0 41.0 34.0 41.0 23 37.99636464379591 40.0 35.0 41.0 34.0 41.0 24 37.90390294004365 40.0 35.0 41.0 34.0 41.0 25 37.7528633497983 40.0 35.0 41.0 34.0 41.0 26 37.781012021001274 40.0 35.0 41.0 34.0 41.0 27 37.764178227054344 40.0 35.0 41.0 34.0 41.0 28 37.67171145542634 40.0 35.0 41.0 34.0 41.0 29 37.58814218432202 40.0 35.0 41.0 33.0 41.0 30 37.35280354886446 40.0 35.0 41.0 33.0 41.0 31 37.170888770263055 40.0 35.0 41.0 33.0 41.0 32 36.82216992925245 40.0 35.0 41.0 32.0 41.0 33 36.3963061942956 40.0 35.0 41.0 30.0 41.0 34 36.0302214323844 40.0 35.0 41.0 27.0 41.0 35 35.785257211587194 39.0 35.0 41.0 25.0 41.0 36 35.620507328148335 39.0 35.0 41.0 24.0 41.0 37 35.56021649965201 39.0 35.0 41.0 23.0 41.0 38 35.45136528572684 39.0 35.0 41.0 23.0 41.0 39 35.40487090431175 39.0 35.0 41.0 23.0 41.0 40 35.336577900007434 39.0 35.0 41.0 23.0 41.0 41 35.23374732247231 39.0 35.0 41.0 23.0 41.0 42 35.08712523058835 39.0 35.0 41.0 22.0 41.0 43 34.97532789156097 39.0 35.0 41.0 21.0 41.0 44 35.00391746795413 39.0 35.0 41.0 21.0 41.0 45 34.97638538830064 39.0 35.0 41.0 22.0 41.0 46 34.90556013541364 39.0 35.0 41.0 22.0 41.0 47 34.85758424498787 38.0 35.0 41.0 22.0 41.0 48 34.80537836760344 38.0 35.0 41.0 22.0 41.0 49 34.75171125271132 38.0 35.0 41.0 20.0 41.0 50 34.66371096891027 38.0 35.0 41.0 20.0 41.0 51 33.901657871086755 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 13.0 11 10.0 12 10.0 13 19.0 14 21.0 15 23.0 16 62.0 17 111.0 18 182.0 19 377.0 20 666.0 21 1034.0 22 1595.0 23 2407.0 24 4053.0 25 7530.0 26 11744.0 27 13412.0 28 12415.0 29 10523.0 30 9901.0 31 10451.0 32 12230.0 33 15602.0 34 27280.0 35 41240.0 36 44123.0 37 55708.0 38 100681.0 39 208249.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.98698569507605 19.361988229013928 22.78905473981526 21.86197133609476 2 41.552695772040195 22.42382982748951 20.937252941057228 15.086221459413071 3 28.074511287848587 21.715002939367935 34.63572109114744 15.574764681636044 4 25.458811684494325 22.26402281219804 34.955504050922016 17.321661452385616 5 22.771992891459618 26.31190410227649 32.79202789358812 18.124075112675772 6 22.668101438600996 31.475393773945715 32.53762053097823 13.318884256475055 7 69.69376516139495 5.6821022900041225 20.16186795142948 4.462264597171449 8 70.07740335560946 6.001716320587063 19.292389402058234 4.628490921745241 9 63.9723023697387 7.685940361238183 21.333222966261463 7.008534302761654 10 33.812022352710635 21.926840145684533 29.27154353980985 14.989593961794975 11 26.445696022055394 22.63448452946463 32.56127061780784 18.358548830672134 12 22.91896128818644 20.140076085707914 37.6232338453014 19.317728780804238 13 21.63290335223088 21.401301430492396 39.033961524687314 17.931833692589414 14 19.28546330520099 24.298437067118947 37.31155948672554 19.10454014095452 15 18.611097972173983 23.2264124169713 39.198667486536344 18.963822124318373 16 20.2801183855775 22.364535681223856 37.7852369400842 19.570108993114445 17 20.522024988006027 23.342297842436363 35.2183578731139 20.917319296443704 18 20.615273901791326 23.365947929265968 36.107432208715394 19.91134596022731 19 20.880154874282898 24.918407200437866 34.659371177977036 19.5420667473022 20 21.173922738544913 24.338642214729276 35.25754944557439 19.229885601151423 21 21.021041820110682 25.132271557054146 34.93371218520045 18.912974437634723 22 19.979593353649886 23.318140968031837 34.740795048347536 21.96147062997074 23 19.74241676858728 24.534600077031712 34.82306356467623 20.89991958970478 24 19.464021460764506 24.31600570304951 35.7023400071626 20.517632829023384 25 20.26474582913826 25.62081477927712 33.857126446878524 20.257312944706097 26 19.232081680642743 24.63325472494949 34.70734706840281 21.42731652600496 27 20.680480569764377 24.026292139386854 34.725591421099935 20.567635869748834 28 19.340027434100723 24.517031441101146 34.96040299747958 21.182538127318555 29 19.673831516781426 23.73691643410748 34.09531660709097 22.49393544202012 30 19.722652053165397 25.018582211080403 34.251069321783085 21.007696413971118 31 20.545337216452353 25.660513139312524 32.31699900669635 21.47715063753877 32 19.836679257522416 25.932151279469696 31.733517578771682 22.497651884236202 33 19.386989749376653 26.756694663864693 31.40157171719902 22.454743869559636 34 18.459230628889596 26.72730098451933 32.02779223060862 22.785676155982458 35 19.195424046056857 25.58263678196647 31.394476691150135 23.827462480826537 36 19.52230203188032 28.893480008919457 30.15386070774574 21.43035725145448 37 19.183936861025334 28.556297342405955 31.023677115500263 21.236088681068445 38 18.7972579413613 28.964768127791558 30.00402051476103 22.233953416086113 39 19.95999756741964 27.212127764526223 30.476515463778203 22.351359204275937 40 19.728395645681157 26.114594806440934 32.547756282476634 21.609253265401275 41 18.94642241757945 26.66293896250448 31.354440472731447 23.036198147184624 42 18.80638011770986 27.42751248386726 31.326567156110848 22.439540242312034 43 19.677547958997508 26.243487779662278 31.643985107202464 22.434979154137753 44 20.549222587860072 25.985363974836307 30.849680048111033 22.615733389192584 45 20.344649336783995 25.391240007838316 30.51131487725605 23.752795778121644 46 20.414079234548048 26.552121412788615 31.028744991249468 22.00505436141387 47 19.544600685176803 25.631457318350442 32.919400504084706 21.90454149238805 48 18.817867302741384 25.883668601469008 31.98150563209925 23.31695846369036 49 19.27127325310323 25.27282064449865 32.90115615138758 22.554749951010532 50 18.85063956591955 24.244717584177415 33.263509267455454 23.641133582447583 51 18.777155367556137 24.672108439026697 31.653276212742664 24.8974599806745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 375.0 1 716.5 2 1058.0 3 13213.0 4 25368.0 5 15897.0 6 6426.0 7 6370.5 8 6315.0 9 6334.5 10 6354.0 11 6379.0 12 6404.0 13 6257.5 14 6111.0 15 5887.5 16 5664.0 17 5216.0 18 4768.0 19 4506.5 20 4245.0 21 4098.5 22 3952.0 23 3770.5 24 3589.0 25 4169.0 26 5301.5 27 5854.0 28 6611.5 29 7369.0 30 8471.5 31 9574.0 32 9963.0 33 10352.0 34 11385.5 35 12419.0 36 14008.0 37 15597.0 38 17122.0 39 18647.0 40 21312.5 41 23978.0 42 27235.5 43 30493.0 44 38359.0 45 46225.0 46 48713.5 47 51202.0 48 50492.5 49 49783.0 50 44764.0 51 39745.0 52 36431.0 53 33117.0 54 30443.0 55 27769.0 56 26298.5 57 24828.0 58 23713.5 59 22599.0 60 21085.5 61 19572.0 62 18329.0 63 17086.0 64 14959.0 65 12832.0 66 10836.5 67 8841.0 68 7477.5 69 6114.0 70 5459.5 71 4805.0 72 4058.5 73 3312.0 74 2685.0 75 1581.0 76 1104.0 77 903.5 78 703.0 79 544.5 80 386.0 81 258.0 82 130.0 83 93.5 84 57.0 85 37.5 86 18.0 87 14.5 88 11.0 89 7.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 591964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.757105523077776 #Duplication Level Percentage of deduplicated Percentage of total 1 75.67359538439169 29.328895216235594 2 8.533642362047322 6.6147855504414945 3 3.4655187491343615 4.029404275572148 4 2.059083827754122 3.1921651677251766 5 1.4214118045892838 2.7544903651107644 6 1.137779957335201 2.6458234721089986 7 0.9200838285564306 2.4961850223407285 8 0.7684945017489861 2.3827697998552426 9 0.6266976323733168 2.1860087642060075 >10 5.299877860824783 34.97713524544424 >50 0.052606032477284084 1.3998456141027782 >100 0.03507068831257476 2.891779627276283 >500 0.003945452435164661 1.0819537406871547 >1k 0.0017535344156287382 0.9208839941150092 >5k 0.0 0.0 >10k+ 4.3838360390718455E-4 3.097874144778406 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18233 3.0800859511727063 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCC 1593 0.26910420228257126 No Hit GAATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 1577 0.26640133521633075 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG 1181 0.19950537532687798 No Hit GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 1069 0.18058530586319438 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTT 938 0.15845558175835017 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC 875 0.14781304268502815 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 748 0.12635903534674406 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG 722 0.12196687636410322 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT 660 0.11149326648242124 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC 644 0.10879039941618072 No Hit CGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG 614 0.10372252366697973 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3785838328006433E-4 0.0 0.0 0.10118858579237927 0.0 2 3.3785838328006433E-4 0.0 0.0 0.47283280740045003 0.0 3 3.3785838328006433E-4 0.0 0.0 0.7875478914258299 0.0 4 3.3785838328006433E-4 0.0 0.0 1.2639282118507207 0.0 5 3.3785838328006433E-4 0.0 0.0 2.5058956287882372 0.0 6 3.3785838328006433E-4 0.0 0.0 3.672689555445939 0.0 7 3.3785838328006433E-4 0.0 0.0 4.5512902811657465 0.0 8 3.3785838328006433E-4 0.0 0.0 5.751194329384895 0.0 9 3.3785838328006433E-4 0.0 0.0 6.442452581575907 0.0 10 3.3785838328006433E-4 0.0 0.0 7.697765404652985 0.0 11 3.3785838328006433E-4 0.0 0.0 8.938550317249021 0.0 12 3.3785838328006433E-4 0.0 0.0 9.9811812880513 0.0 13 3.3785838328006433E-4 0.0 0.0 10.417863248440783 0.0 14 3.3785838328006433E-4 0.0 0.0 10.624632579008184 0.0 15 3.3785838328006433E-4 0.0 0.0 10.897960011081755 0.0 16 3.3785838328006433E-4 0.0 0.0 11.39292254258705 0.0 17 3.3785838328006433E-4 0.0 0.0 11.942111344608794 0.0 18 3.3785838328006433E-4 0.0 0.0 12.589616936165037 0.0 19 3.3785838328006433E-4 0.0 0.0 12.987107324094033 0.0 20 3.3785838328006433E-4 0.0 0.0 13.353514740761263 0.0 21 3.3785838328006433E-4 0.0 0.0 13.779047374502504 0.0 22 3.3785838328006433E-4 0.0 0.0 14.23498726273895 0.0 23 5.067875749200965E-4 0.0 0.0 14.687210708759316 0.0 24 5.067875749200965E-4 0.0 0.0 15.058010284409187 0.0 25 5.067875749200965E-4 0.0 0.0 15.411241224128494 0.0 26 5.067875749200965E-4 0.0 0.0 15.720381644829754 0.0 27 5.067875749200965E-4 0.0 0.0 16.041853896520735 0.0 28 5.067875749200965E-4 0.0 0.0 16.368056165577638 0.0 29 5.067875749200965E-4 0.0 0.0 16.70794169915738 0.0 30 5.067875749200965E-4 0.0 0.0 17.11675034292626 0.0 31 5.067875749200965E-4 0.0 0.0 17.48231311363529 0.0 32 5.067875749200965E-4 0.0 0.0 17.822029718023394 0.0 33 5.067875749200965E-4 0.0 0.0 18.157523092620497 0.0 34 5.067875749200965E-4 0.0 0.0 18.49115824610956 0.0 35 5.067875749200965E-4 0.0 0.0 18.84793669885331 0.0 36 5.067875749200965E-4 0.0 0.0 19.199140488272935 0.0 37 5.067875749200965E-4 0.0 0.0 19.549499631734363 0.0 38 5.067875749200965E-4 0.0 0.0 19.90712273043631 0.0 39 5.067875749200965E-4 0.0 0.0 20.25883330743086 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTAACG 25 3.8885046E-5 45.000004 1 ATAGACG 20 7.030511E-4 45.0 1 GCCGCTA 20 7.030511E-4 45.0 44 TACGTGC 20 7.030511E-4 45.0 37 CTAACGG 30 2.1637115E-6 44.999996 2 CGTTTTT 7515 0.0 44.101795 1 CCCCGAT 100 0.0 42.750004 40 CCCTCGT 55 6.002665E-11 40.909092 14 TGCAATC 105 0.0 40.714287 34 TTTAGCG 50 1.0804797E-9 40.500004 1 TCGTTCG 50 1.0804797E-9 40.500004 45 TGTTGCG 50 1.0804797E-9 40.500004 1 GTTATAG 50 1.0804797E-9 40.500004 1 TCGTTCA 95 0.0 40.263157 16 GCGTAAG 45 1.9255822E-8 40.0 1 CGTAAGG 80 0.0 39.375 2 TACCGGT 40 3.4544246E-7 39.375 40 TAACCCG 35 6.2431573E-6 38.571426 37 CCGACGG 35 6.2431573E-6 38.571426 2 TGATGCG 35 6.2431573E-6 38.571426 1 >>END_MODULE