SRR3551465_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551465_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	388573
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1837	0.4727554410625545	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1177	0.30290318678858286	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	567	0.14591852753536658	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT	552	0.14205824902913997	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG	542	0.13948473002498885	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC	487	0.1253303755021579	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCC	471	0.12121274509551616	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	430	0.11066131717849671	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	407	0.10474222346894921	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	402	0.10345546396687366	No Hit
GAACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	397	0.10216870446479812	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	395	0.1016540006639679	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGAGAG	30	2.161778E-6	45.000004	1
CGGAATC	20	7.027516E-4	45.0	19
GACCGTT	35	1.209155E-7	45.0	1
CGACAAT	25	3.8860235E-5	45.0	20
CGCTAGG	20	7.027516E-4	45.0	2
CGAATAT	40	6.7957444E-9	45.0	14
TTAACGG	25	3.8860235E-5	45.0	2
TCATCGA	25	3.8860235E-5	45.0	16
TTCATCG	25	3.8860235E-5	45.0	15
CCGTTAG	25	3.8860235E-5	45.0	1
GCACTAG	20	7.027516E-4	45.0	1
CCTCGTG	65	0.0	44.999996	15
CGAGGGT	60	3.6379788E-12	41.250004	4
CATACGA	55	6.002665E-11	40.909092	18
ACATACG	55	6.002665E-11	40.909092	17
CGAGATA	95	0.0	40.263157	19
CGTATGG	45	1.9226718E-8	40.0	2
ACGTAGG	45	1.9226718E-8	40.0	2
ACGGGCT	120	0.0	39.375004	5
GCGATAC	40	3.45035E-7	39.375	9